Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19902_v3 Cicer arietinum L. HOM05D003075 ORTHO05D003430 3.9e-57 224.9 145 100.0
TPR.G9841 Trifolium pratense HOM05D003075 ORTHO05D003430 5.8e-37 157.9 149 79.2
Psat7g231560 Pisum sativum HOM05D003075 ORTHO05D003430 2.3e-33 146.0 150 76.0
Ca_17564_v3 Cicer arietinum L. HOM05D003075 ORTHO05D003430 2.8e-31 139.0 105 85.7
Ca_29890_v3 Cicer arietinum L. HOM05D003075 ORTHO05D003430 3.1e-30 135.6 110 80.9
Medtr4g023500 Medicago truncatula HOM05D003075 ORTHO05D003430 1.5e-29 133.3 147 68.0
Glyma.17G254400 Glycine max HOM05D003075 ORTHO05D003430 2.0e-29 132.9 146 64.4
Ca_19890_v3 Cicer arietinum L. HOM05D003075 ORTHO05D003430 7.6e-29 131.0 107 80.4
VMungo0331G0754 Vigna mungo HOM05D003075 ORTHO05D003430 9.3e-27 124.0 146 62.3
Lj3g0026412 Lotus japonicus HOM05D003075 ORTHO05D003430 6.0e-26 121.3 144 68.1
Medtr4g084670 Medicago truncatula HOM05D003075 ORTHO05D003430 3.9e-25 118.6 104 64.4
Atru.chr5.294 Acer truncatum HOM05D003075 ORTHO05D003430 1.5e-24 116.7 142 62.7
GSVIVG01027678001 Vitis vinifera HOM05D003075 ORTHO05D003430 1.5e-24 116.7 150 58.7
RcHm_v2.0_Chr1g0350011 Rosa chinensis HOM05D003075 ORTHO05D003430 4.3e-24 115.2 146 53.4
GSVIVG01027679001 Vitis vinifera HOM05D003075 ORTHO05D003430 9.6e-24 114.0 147 57.8
CSS0007073 Camellia sinensis var. sinensis HOM05D003075 ORTHO05D003430 2.8e-23 112.5 61 86.9
CsaV3_3G009750 Cucumis sativus L. HOM05D003075 ORTHO05D003430 3.7e-23 112.1 60 90.0
Duzib138G0067 Durio zibethinus HOM05D003075 ORTHO05D003430 3.7e-23 112.1 61 86.9
Lalb_Chr12g0208211 Lupinus albus HOM05D003075 ORTHO05D003430 3.7e-23 112.1 143 49.7
arahy.Tifrunner.gnm1.ann1.G5NZ7A Arachis hypogaea HOM05D003075 ORTHO05D003430 4.8e-23 111.7 61 85.2
Lj7C530G5 Lonicera japonica HOM05D003075 ORTHO05D003430 4.8e-23 111.7 63 84.1
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 6.2e-23 111.3 60 88.3
MELO3C006196.2 Cucumis melo HOM05D003075 ORTHO05D003430 6.2e-23 111.3 60 90.0
Dinv43697 Davidia involucrata HOM05D003075 ORTHO05D003430 6.2e-23 111.3 60 88.3
Gorai.004G162500 Gossypium raimondii HOM05D003075 ORTHO05D003430 6.2e-23 111.3 146 56.2
MD00G1100000 Malus domestica HOM05D003075 ORTHO05D003430 8.2e-23 110.9 144 57.6
Sed0011315 Sechium edule HOM05D003075 ORTHO05D003430 8.2e-23 110.9 145 66.2
arahy.Tifrunner.gnm1.ann1.LQNG80 Arachis hypogaea HOM05D003075 ORTHO05D003430 1.1e-22 110.5 166 55.4
CAN.G388.29 Capsicum annuum HOM05D003075 ORTHO05D003430 1.1e-22 110.5 142 59.2
Phvul.010G084500 Phaseolus vulgaris HOM05D003075 ORTHO05D003430 1.1e-22 110.5 106 66.0
vmacro13410 Vaccinium macrocarpon HOM05D003075 ORTHO05D003430 1.1e-22 110.5 63 82.5
Duzib138G1594 Durio zibethinus HOM05D003075 ORTHO05D003430 1.4e-22 110.2 61 85.2
Gohir.A08G135300 Gossypium hirsutum HOM05D003075 ORTHO05D003430 1.4e-22 110.2 146 54.8
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 1.8e-22 109.8 60 88.3
Nitab4.5_0004552g0030 Nicotiana tabacum HOM05D003075 ORTHO05D003430 1.8e-22 109.8 61 83.6
Cpa.g.sc11.49 Carica papaya HOM05D003075 ORTHO05D003430 2.4e-22 109.4 60 85.0
Rhsim07G0028400 Rhododendron simsii HOM05D003075 ORTHO05D003430 2.4e-22 109.4 63 81.0
Thecc.01G378100 Theobroma cacao HOM05D003075 ORTHO05D003430 2.4e-22 109.4 143 46.2
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 3.1e-22 109.0 152 61.8
Gohir.D08G156200 Gossypium hirsutum HOM05D003075 ORTHO05D003430 3.1e-22 109.0 60 85.0
Nitab4.5_0000457g0150 Nicotiana tabacum HOM05D003075 ORTHO05D003430 3.1e-22 109.0 155 45.8
Sopen01g036960 Solanum pennellii HOM05D003075 ORTHO05D003430 3.1e-22 109.0 60 83.3
TWI23G0023 Tripterygium wilfordii HOM05D003075 ORTHO05D003430 3.1e-22 109.0 61 83.6
Cfa001744 Carpinus fangiana HOM05D003075 ORTHO05D003430 4.0e-22 108.6 142 58.5
SGA_v2.0_scaffold43G16486 Striga asiatica HOM05D003075 ORTHO05D003430 4.0e-22 108.6 61 83.6
arahy.Tifrunner.gnm1.ann1.7U8F1S Arachis hypogaea HOM05D003075 ORTHO05D003430 5.3e-22 108.2 168 56.5
CANSAT35G1223 Cannabis sativa HOM05D003075 ORTHO05D003430 5.3e-22 108.2 145 58.6
Lj9A568T64 Lonicera japonica HOM05D003075 ORTHO05D003430 1.2e-21 107.1 60 83.3
PGSC0003DMG402025960 Solanum tuberosum HOM05D003075 ORTHO05D003430 1.2e-21 107.1 59 83.1
THA.LOC104819580 Tarenaya hassleriana HOM05D003075 ORTHO05D003430 1.2e-21 107.1 119 54.6
MD07G1120400 Malus domestica HOM05D003075 ORTHO05D003430 1.5e-21 106.7 61 82.0
Haze_16798 Corylus avellana HOM05D003075 ORTHO05D003430 2.0e-21 106.3 151 55.6
Glyma.17G199600 Glycine max HOM05D003075 ORTHO05D003430 2.0e-21 106.3 68 82.4
Sabra02G0114300 Salix brachista HOM05D003075 ORTHO05D003430 3.4e-21 105.5 60 78.3
Cc02_g24000 Coffea canephora HOM05D003075 ORTHO05D003430 4.5e-21 105.1 60 78.3
Gohir.D05G389001 Gossypium hirsutum HOM05D003075 ORTHO05D003430 4.5e-21 105.1 142 45.1
Prupe.2G143900 Prunus persica HOM05D003075 ORTHO05D003430 4.5e-21 105.1 60 81.7
unitig_8.g3388 Utricularia gibba HOM05D004961 ORTHO05D006258 4.5e-21 105.1 58 82.8
Gorai.009G455600 Gossypium raimondii HOM05D003075 ORTHO05D003430 5.8e-21 104.8 60 81.7
Manes.01G266500 Manihot esculenta HOM05D003075 ORTHO05D003430 5.8e-21 104.8 118 51.7
Solyc01g091210.3 Solanum lycopersicum HOM05D003075 ORTHO05D003430 5.8e-21 104.8 58 82.8
CiPaw.09G176300 Carya illinoinensis HOM05D003075 ORTHO05D003430 7.6e-21 104.4 124 66.9
FvH4_7g11590 Fragaria vesca HOM05D003075 ORTHO05D003430 7.6e-21 104.4 60 80.0
FAN01G2913 Fragaria x ananassa HOM05D003075 ORTHO05D003430 7.6e-21 104.4 60 80.0
FAN03G3200 Fragaria x ananassa HOM05D003075 ORTHO05D003430 7.6e-21 104.4 60 80.0
FAN06G2161 Fragaria x ananassa HOM05D003075 ORTHO05D003430 7.6e-21 104.4 60 80.0
FAN10G0718 Fragaria x ananassa HOM05D003075 ORTHO05D003430 7.6e-21 104.4 60 80.0
FAN10G3608 Fragaria x ananassa HOM05D003075 ORTHO05D003430 7.6e-21 104.4 60 80.0
Nn1g01143 Nelumbo nucifera HOM05D003075 ORTHO05D003430 1.0e-20 104.0 60 76.7
Nn4g26370 Nelumbo nucifera HOM05D003075 ORTHO05D003430 1.0e-20 104.0 61 77.0
MSTRG.4898 Avicennia marina HOM05D003075 ORTHO05D003430 1.3e-20 103.6 106 53.8
PGR042G3567 Punica granatum HOM05D003075 ORTHO05D003430 1.3e-20 103.6 109 48.6
Ciclev10009039m.g Citrus clementina HOM05D003075 ORTHO05D003430 1.7e-20 103.2 144 51.4
ECA236G1357 Erigeron canadensis HOM05D003075 ORTHO05D003430 1.7e-20 103.2 60 78.3
Potri.002G117000 Populus trichocarpa HOM05D003075 ORTHO05D003430 1.7e-20 103.2 60 80.0
Potri.013G094500 Populus trichocarpa HOM05D003075 ORTHO05D003430 1.7e-20 103.2 60 80.0
Gorai.007G000400 Gossypium raimondii HOM05D003075 ORTHO05D003430 2.2e-20 102.8 60 80.0
Gorai.008G298600 Gossypium raimondii HOM05D003075 ORTHO05D003430 2.2e-20 102.8 60 80.0
Oeu003479.1 Olea europaea HOM05D003075 ORTHO05D003430 2.2e-20 102.8 60 81.7
PSO478G3315 Papaver somniferum HOM05D003075 ORTHO05D003430 2.2e-20 102.8 61 78.7
Migut.N01626 Erythranthe guttata HOM05D003075 ORTHO05D003430 2.9e-20 102.4 61 77.0
Eucgr.D02463 Eucalyptus grandis HOM05D003075 ORTHO05D003430 2.9e-20 102.4 61 75.4
Lsat_1_v5_gn_7_9801 Lactuca sativa HOM05D003075 ORTHO05D003430 2.9e-20 102.4 60 78.3
FAN06G4578 Fragaria x ananassa HOM05D003075 ORTHO05D003430 3.8e-20 102.1 60 78.3
HanXRQChr04g0122761 Helianthus annuus HOM05D003075 ORTHO05D003430 3.8e-20 102.1 140 55.0
SGA_v2.0_scaffold11G05572 Striga asiatica HOM05D003075 ORTHO05D003430 3.8e-20 102.1 61 80.3
TWI14G0663 Tripterygium wilfordii HOM05D003075 ORTHO05D003430 3.8e-20 102.1 60 81.7
TAR375G0194 Trochodendron aralioides HOM05D003075 ORTHO05D003430 3.8e-20 102.1 140 57.1
QL08p052672 Quercus lobata HOM05D003075 ORTHO05D003430 4.9e-20 101.7 158 57.6
Sc23g0003640 Simmondsia chinensis HOM05D003075 ORTHO05D003430 4.9e-20 101.7 60 81.7
Carub.0004s2796 Capsella rubella HOM05D003075 ORTHO05D003430 6.5e-20 101.3 109 54.1
Os06g0134050 Oryza sativa ssp. japonica HOM05D003075 ORTHO05D003430 6.5e-20 101.3 61 77.0
ATR0733G147 Amborella trichopoda HOM05D003075 ORTHO05D003430 8.4e-20 100.9 59 79.7
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 8.4e-20 100.9 61 75.4
Oeu064471.1 Olea europaea HOM05D003075 ORTHO05D003430 1.1e-19 100.5 147 61.2
Aqoxy5G02670 Aquilegia oxysepala HOM05D003075 ORTHO05D003430 2.5e-19 99.4 59 78.0
Gohir.D01G222050 Gossypium hirsutum HOM05D003075 ORTHO05D003430 3.2e-19 99.0 60 78.3
Gorai.002G268800 Gossypium raimondii HOM05D003075 ORTHO05D003430 3.2e-19 99.0 60 78.3
SalBow7G2967 Salvia bowleyana HOM05D003075 ORTHO05D003430 3.2e-19 99.0 62 75.8
Thhalv10001570m.g Eutrema salsugineum HOM05D003075 ORTHO05D003430 4.2e-19 98.6 60 80.0
SalBow5G2038 Salvia bowleyana HOM05D003075 ORTHO05D003430 4.2e-19 98.6 61 75.4
Zm00001eb377990 Zea mays HOM05D003075 ORTHO05D003430 4.2e-19 98.6 61 72.1
Aqoxy7G00659 Aquilegia oxysepala HOM05D003075 ORTHO05D003430 5.5e-19 98.2 59 76.3
Aa31LG1G26840 Aethionema arabicum HOM05D003075 ORTHO05D003430 7.1e-19 97.8 61 75.4
AT2G45330 Arabidopsis thaliana HOM05D003075 ORTHO05D003430 7.1e-19 97.8 143 46.9
MBI12_g31643_MAGBIO Magnolia biondii HOM05D003075 ORTHO05D003430 7.1e-19 97.8 59 78.0
AL4G44430 Arabidopsis lyrata HOM05D003075 ORTHO05D003430 9.3e-19 97.4 109 56.9
Thhalv10019720m.g Eutrema salsugineum HOM05D003075 ORTHO05D003430 9.3e-19 97.4 60 78.3
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 1.2e-18 97.1 61 73.8
Lsat_1_v5_gn_8_86100 Lactuca sativa HOM05D003075 ORTHO05D003430 2.1e-18 96.3 60 75.0
Hund17026 Selenicereus undatus HOM05D003075 ORTHO05D003430 2.1e-18 96.3 59 74.6
BcaB02g08941 Brassica carinata HOM05D003075 ORTHO05D003430 2.7e-18 95.9 60 75.0
A05p05320 Brassica napus HOM05D003566 ORTHO05D003430 4.6e-18 95.1 60 75.0
BraA05t19501Z Brassica rapa HOM05D003075 ORTHO05D003430 4.6e-18 95.1 60 75.0
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 6.0e-18 94.7 60 73.3
AUR62013643 Chenopodium quinoa HOM05D003075 ORTHO05D003430 1.0e-17 94.0 59 76.3
AUR62018381 Chenopodium quinoa HOM05D003075 ORTHO05D003430 1.0e-17 94.0 59 76.3
AUR62004205 Chenopodium quinoa HOM05D003075 ORTHO05D003430 1.3e-17 93.6 60 75.0
BolC4t22246H Brassica oleracea HOM05D003075 ORTHO05D003430 3.0e-17 92.4 59 74.6
AT5G23600 Arabidopsis thaliana HOM05D003075 ORTHO05D003430 3.9e-17 92.0 59 74.6
BolC4t22244H Brassica oleracea HOM05D003075 ORTHO05D003430 3.9e-17 92.0 59 71.2
Sp4g27360 Schrenkiella parvula HOM05D003075 ORTHO05D003430 5.1e-17 91.7 131 61.8
BcaC02g12227 Brassica carinata HOM05D003075 ORTHO05D003430 6.7e-17 91.3 124 58.9
A05p05260 Brassica napus HOM05D003075 ORTHO05D003430 6.7e-17 91.3 59 72.9
BraA05t19496Z Brassica rapa HOM05D003075 ORTHO05D003430 6.7e-17 91.3 59 72.9
arahy.Tifrunner.gnm1.ann1.1FZS4Y Arachis hypogaea HOM05D003075 ORTHO05D003430 1.1e-16 90.5 49 85.7
arahy.Tifrunner.gnm1.ann1.TA4JIU Arachis hypogaea HOM05D003075 ORTHO05D003430 1.1e-16 90.5 49 85.7
CDE09G0478 Ceratophyllum demersum HOM05D003075 ORTHO05D003430 1.1e-16 90.5 59 72.9
PSO135G0225 Papaver somniferum HOM05D003075 ORTHO05D003430 1.1e-16 90.5 59 76.3
BcaC02g12230 Brassica carinata HOM05D003075 ORTHO05D003430 2.5e-16 89.4 155 55.5
C04p06190 Brassica napus HOM05D003075 ORTHO05D003430 2.5e-16 89.4 155 55.5
arahy.Tifrunner.gnm1.ann1.2E18SB Arachis hypogaea HOM05D003075 ORTHO05D003430 3.3e-16 89.0 50 80.0
Peaxi162Scf00013g03226 Petunia axillaris HOM05D003075 ORTHO05D003430 5.7e-16 88.2 51 80.4
DCAR_008556 Daucus carota HOM05D003075 ORTHO05D003430 9.7e-16 87.4 59 72.9
EL10Ac1g00881 Beta vulgaris HOM05D003075 ORTHO05D003430 1.6e-15 86.7 59 69.5
Hma1.2p1_0446F.1_g154650 Hydrangea macrophylla HOM05D003075 ORTHO05D003430 2.2e-15 86.3 51 76.5
HPP92_008230 Vanilla planifolia HOM05D003075 ORTHO05D003430 1.1e-14 84.0 59 64.4
Aqoxy5G02557 Aquilegia oxysepala HOM05D003075 ORTHO05D003430 1.4e-14 83.6 56 71.4
RcHm_v2.0_Chr7g0199321 Rosa chinensis HOM05D003075 ORTHO05D003430 2.0e-13 79.7 49 73.5
Mapoly0104s0031 Marchantia polymorpha HOM05D003075 ORTHO05D003430 2.6e-13 79.3 61 59.0
SEGI_11423 Sequoiadendron giganteum HOM05D003075 ORTHO05D003430 2.9e-12 75.9 59 61.0
Ah.05g174300 Amaranthus hybridus HOM05D003075 ORTHO05D003430 1.9e-11 73.2 48 70.8
SMO347G0280 Selaginella moellendorffii HOM05D003075 ORTHO05D003430 3.2e-11 72.4 59 54.2
SMO364G0829 Selaginella moellendorffii HOM05D003075 ORTHO05D003430 9.4e-11 70.9 57 52.6
SMO364G0475 Selaginella moellendorffii HOM05D003075 ORTHO05D003430 2.7e-10 69.3 62 46.8
AagrBONN_evm.TU.Sc2ySwM_344.2903 Anthoceros agrestis HOM05D003075 ORTHO05D003430 3.6e-10 68.9 60 55.0
CARHR140540 Cardamine hirsuta HOM05D003075 ORTHO05D003430 3.6e-10 68.9 43 76.7
C04p06260 Brassica napus HOM05D003075 ORTHO05D003430 4.6e-10 68.6 51 66.7
AUR62043207 Chenopodium quinoa HOM05D003075 ORTHO05D003430 7.9e-10 67.8 43 74.4
Sp4g05260 Schrenkiella parvula HOM05D003075 ORTHO05D003430 1.4e-09 67.0 44 68.2
Pp3c9_2940 Physcomitrium patens HOM05D003075 ORTHO05D003430 1.8e-09 66.6 59 50.8
SEGI_02177 Sequoiadendron giganteum HOM05D003075 ORTHO05D003430 2.3e-09 66.2 58 53.4
SEGI_22200 Sequoiadendron giganteum HOM05D003075 ORTHO05D003430 2.3e-09 66.2 59 52.5
SEGI_27190 Sequoiadendron giganteum HOM05D003075 ORTHO05D003430 2.3e-09 66.2 58 53.4
Zm00001eb244410 Zea mays HOM05D003075 ORTHO05D003430 2.3e-09 66.2 43 67.4
Medtr2g029020 Medicago truncatula HOM05D003075 ORTHO05D003430 3.0e-09 65.9 39 79.5
SEGI_08717 Sequoiadendron giganteum HOM05D003075 ORTHO05D003430 1.5e-08 63.5 58 51.7
SEGI_27896 Sequoiadendron giganteum HOM05D003075 ORTHO05D003430 1.5e-08 63.5 58 51.7
AL1G18190 Arabidopsis lyrata HOM05D003075 ORTHO05D003430 7.4e-08 61.2 43 62.8
CBR_g28889 Chara braunii HOM05D003075 ORTHO05D003430 7.4e-08 61.2 58 51.7
PSO384G4045 Papaver somniferum HOM05D003075 ORTHO05D003430 1.7e-07 60.1 35 77.1
AUR62014192 Chenopodium quinoa HOM05D003075 ORTHO05D003430 2.4e-06 56.2 35 71.4
Nitab4.5_0005272g0010 Nicotiana tabacum HOM05D003075 ORTHO05D003430 2.4e-06 56.2 61 49.2
SMO199G0023 Selaginella moellendorffii HOM05D003075 ORTHO05D003430 5.3e-06 55.1 55 43.6
SMO361G0010 Selaginella moellendorffii HOM05D003075 ORTHO05D003430 6.9e-06 54.7 52 46.2


User provided reference genes

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