Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.2e-121 439.9 222 100.0
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 1.6e-107 392.9 218 90.4
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.1e-107 392.5 221 90.5
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.5e-105 386.3 220 86.4
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 3.4e-105 385.2 220 86.4
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.9e-103 379.4 220 85.5
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 3.2e-103 378.6 219 86.3
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.5e-97 359.8 214 82.7
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 3.8e-96 355.1 214 81.3
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 4.2e-95 351.7 219 78.1
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.6e-94 349.7 214 80.4
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 7.9e-94 347.4 214 81.3
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 7.9e-94 347.4 214 81.3
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 3.9e-93 345.1 214 79.9
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 2.5e-92 342.4 214 79.4
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 3.3e-92 342.0 214 79.4
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 1.7e-91 339.7 204 81.9
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 2.2e-91 339.3 218 79.4
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 2.2e-91 339.3 214 78.5
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 3.7e-91 338.6 214 80.4
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 4.8e-91 338.2 220 77.3
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.4e-90 335.9 216 77.3
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 5.3e-90 334.7 212 80.2
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 2.0e-89 332.8 190 86.3
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 3.4e-89 332.0 218 74.3
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 1.7e-88 329.7 237 72.2
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 1.7e-88 329.7 217 75.1
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.2e-88 329.3 217 74.7
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 2.9e-88 328.9 218 74.8
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 3.8e-88 328.6 212 77.4
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 5.0e-88 328.2 222 74.8
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 8.5e-88 327.4 219 76.3
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.1e-87 327.0 212 76.9
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 1.1e-87 327.0 218 74.3
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.9e-87 326.2 217 74.7
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 2.5e-87 325.9 219 74.9
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 4.2e-87 325.1 219 74.9
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 5.5e-87 324.7 214 74.3
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 7.2e-87 324.3 214 75.7
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 9.4e-87 323.9 219 74.0
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 1.2e-86 323.6 219 74.4
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.6e-86 323.2 214 75.2
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 2.7e-86 322.4 224 73.2
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.6e-86 322.0 218 73.9
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 3.6e-86 322.0 219 74.9
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 4.7e-86 321.6 217 72.8
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 7.9e-86 320.9 209 76.1
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.0e-85 320.5 216 74.1
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.0e-85 320.5 213 75.1
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 3.0e-85 318.9 219 74.4
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 8.8e-85 317.4 216 74.1
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 8.8e-85 317.4 216 74.1
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 2.0e-84 316.2 219 72.1
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 2.0e-84 316.2 218 73.4
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 2.0e-84 316.2 222 71.6
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 2.6e-84 315.8 216 73.6
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 3.3e-84 315.5 223 72.6
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 3.3e-84 315.5 215 73.5
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 4.4e-84 315.1 244 70.5
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 5.7e-84 314.7 219 74.9
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 9.7e-84 313.9 218 70.6
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 9.7e-84 313.9 212 73.1
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 9.7e-84 313.9 219 72.6
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.3e-83 313.5 218 73.4
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 2.2e-83 312.8 228 72.8
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.1e-82 310.5 222 73.4
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.8e-82 309.7 243 66.7
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 3.1e-82 308.9 216 72.2
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 3.1e-82 308.9 216 72.2
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 3.5e-81 305.4 212 71.2
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.1e-79 300.4 214 72.4
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.5e-79 300.1 251 65.7
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 2.5e-79 299.3 218 68.8
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 7.2e-79 297.7 200 77.0
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 7.2e-79 297.7 212 69.3
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 9.4e-79 297.4 211 70.1
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.2e-78 297.0 200 76.5
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.6e-78 295.4 220 69.5
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 6.1e-78 294.7 211 69.7
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 6.1e-78 294.7 208 72.1
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 1.8e-77 293.1 212 69.8
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 6.7e-77 291.2 216 69.9
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 2.6e-76 289.3 243 62.6
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.8e-75 285.8 214 68.7
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 1.8e-74 283.1 220 65.0
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 2.4e-74 282.7 216 67.6
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 4.1e-74 282.0 191 73.3
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 9.1e-74 280.8 214 68.7
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.2e-72 276.2 218 65.6
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.6e-70 268.9 178 73.6
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 4.0e-69 265.4 204 65.2
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 9.8e-68 260.8 216 64.4
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.7e-67 260.0 222 63.1
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 2.2e-67 259.6 248 58.5
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 2.8e-59 232.6 215 56.7
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.4e-58 230.3 261 52.1
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 5.4e-58 228.4 151 73.5
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 4.5e-57 225.3 216 54.6
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 2.3e-56 223.0 150 71.3
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 1.1e-55 220.7 204 57.4
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 2.5e-55 219.5 222 55.9
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 8.0e-54 214.5 150 70.0
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 1.2e-52 210.7 205 59.5
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 2.0e-49 199.9 140 70.7
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 9.5e-47 191.0 159 64.8
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.8e-45 186.8 218 49.1
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.3e-43 180.6 198 54.0
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 2.4e-42 176.4 217 46.1
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 9.5e-39 164.5 150 53.3
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.6e-33 147.1 380 31.3
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.5e-33 146.0 107 67.3
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 8.6e-32 141.4 83 77.1
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 4.9e-27 125.6 84 70.2
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 2.8e-22 109.8 70 72.9
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.7e-22 109.0 143 47.6
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 3.2e-18 96.3 62 82.3
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 1.6e-17 94.0 67 68.7
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 3.0e-16 89.7 51 80.4
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.5e-15 86.7 58 75.9
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 7.3e-15 85.1 78 57.7
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 7.3e-15 85.1 57 80.7
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.5e-12 77.4 287 26.5
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 7.6e-12 75.1 214 29.9
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.3e-11 74.3 48 75.0
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.2e-09 67.8 53 71.7
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.6e-09 67.4 52 67.3
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 8.7e-08 61.6 38 78.9


User provided reference genes

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