Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 1.8e-250 869.0 506 100.0
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 1.0e-144 517.7 517 65.0
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.2e-134 484.2 483 66.7
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 4.1e-106 389.4 529 50.9
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 1.3e-99 367.9 513 50.1
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 1.1e-95 354.8 510 49.0
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 2.0e-92 344.0 538 46.8
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 1.2e-89 334.7 467 51.2
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 2.0e-76 290.8 504 44.8
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 5.7e-63 246.1 545 40.6
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 7.7e-60 235.7 449 41.0
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 6.3e-54 216.1 439 41.2
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 8.5e-51 205.7 414 40.3
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 1.4e-48 198.4 467 36.8
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 5.2e-48 196.4 418 39.2
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 2.6e-47 194.1 592 34.5
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 5.7e-47 193.0 460 38.5
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 4.8e-46 189.9 435 38.9
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 4.8e-46 189.9 534 34.5
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 6.3e-46 189.5 369 39.6
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 2.4e-45 187.6 452 39.8
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 9.1e-45 185.7 478 37.0
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 8.5e-43 179.1 576 31.4
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 3.2e-42 177.2 426 36.4
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 5.5e-42 176.4 397 36.3
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 9.4e-42 175.6 472 34.7
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 1.4e-40 171.8 448 34.8
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 2.3e-40 171.0 473 33.6
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 3.0e-40 170.6 411 37.0
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 1.2e-39 168.7 439 35.1
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 1.2e-39 168.7 517 31.1
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 1.8e-37 161.4 534 34.8
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 7.7e-36 156.0 279 39.4
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 1.3e-35 155.2 278 38.5
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 4.2e-34 150.2 413 36.3
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 6.1e-33 146.4 407 33.9
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 1.0e-32 145.6 381 34.9
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 6.8e-32 142.9 382 35.6
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.5e-31 141.7 455 31.0
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 2.0e-31 141.4 386 33.2
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.3e-30 138.7 350 33.1
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.2e-28 132.1 420 30.2
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 2.0e-28 131.3 206 44.2
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 3.5e-28 130.6 300 34.7
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 7.7e-28 129.4 289 37.4
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.3e-27 128.6 633 26.4
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.7e-27 128.3 424 34.2
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 2.2e-27 127.9 487 29.6
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 2.5e-26 124.4 371 32.3
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 9.5e-26 122.5 296 33.4
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 9.5e-26 122.5 370 31.1
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.2e-25 122.1 633 26.4
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 1.2e-25 122.1 207 40.6
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.6e-25 121.7 571 26.4
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 1.6e-25 121.7 294 36.7
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 3.6e-25 120.6 253 37.2
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 1.0e-24 119.0 482 28.8
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 1.8e-24 118.2 494 29.1
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 3.0e-24 117.5 462 31.0
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 3.0e-24 117.5 283 34.3
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 2.0e-23 114.8 296 31.8
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 3.4e-23 114.0 516 30.8
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 7.5e-23 112.8 212 38.2
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 9.8e-23 112.5 329 31.6
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 3.7e-22 110.5 533 28.7
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 9.2e-21 105.9 420 31.9
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 1.2e-20 105.5 364 30.2
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 1.2e-20 105.5 278 32.4
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 2.7e-20 104.4 515 30.9
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 4.5e-20 103.6 375 31.2
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 7.8e-20 102.8 387 30.5
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 2.9e-19 100.9 285 30.5
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 8.6e-19 99.4 428 29.0
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 1.1e-18 99.0 274 31.8
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 1.5e-18 98.6 306 33.7
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 1.9e-18 98.2 391 30.7
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 8.0e-17 92.8 252 29.8
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 8.0e-17 92.8 306 30.1
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 1.0e-16 92.4 361 31.0
QL04p036188 Quercus lobata HOM05D006954 ORTHO05D008729 8.9e-16 89.4 407 28.7
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 8.9e-16 89.4 258 32.6
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 1.5e-15 88.6 277 31.8
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 6.4e-14 83.2 315 30.8
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 1.8e-13 81.6 181 33.1
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 2.4e-13 81.3 185 33.5
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 2.4e-13 81.3 265 29.1
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 7.0e-13 79.7 315 28.3
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 9.2e-13 79.3 179 35.8
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 5.9e-12 76.6 185 33.0
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.0e-11 75.9 378 31.0
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 6.6e-11 73.2 196 30.6
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 2.5e-10 71.2 371 27.5
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 4.3e-10 70.5 279 28.0
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 8.0e-09 66.2 363 25.1
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 1.4e-08 65.5 168 29.8
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 6.8e-08 63.2 493 24.3
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 8.9e-08 62.8 175 30.9
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 5.8e-07 60.1 352 28.1
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 5.8e-07 60.1 352 28.1
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 7.5e-07 59.7 375 25.1
Lj1g0005307 Lotus japonicus HOM05D005220 ORTHO05D006082 7.5e-07 59.7 188 30.3
Potri.017G091700 Populus trichocarpa HOM05D005220 ORTHO05D006082 7.5e-07 59.7 174 29.3
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 9.8e-07 59.3 337 26.1
Nitab4.5_0000618g0050 Nicotiana tabacum HOM05D020458 ORTHO05D022160 9.8e-07 59.3 286 23.8
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.3e-06 58.9 375 25.3
Lsat_1_v5_gn_2_87740 Lactuca sativa HOM05D005220 ORTHO05D006082 1.3e-06 58.9 174 28.7
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 1.3e-06 58.9 175 30.3
Thecc.03G251300 Theobroma cacao HOM05D006954 ORTHO05D008729 1.7e-06 58.5 59 47.5
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 2.2e-06 58.2 190 27.9
DCAR_011050 Daucus carota HOM05D005220 ORTHO05D006082 4.9e-06 57.0 204 22.5
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.9e-06 57.0 308 25.6
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 6.4e-06 56.6 301 26.6
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 8.3e-06 56.2 346 27.2


User provided reference genes

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