Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 7.3e-130 467.2 236 100.0
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 4.2e-101 371.7 240 78.3
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 4.3e-98 361.7 239 75.7
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 1.6e-92 343.2 239 73.6
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 4.3e-90 335.1 238 75.6
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 9.6e-90 334.0 240 73.3
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 2.9e-86 322.4 238 71.4
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 3.8e-86 322.0 186 84.4
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 9.3e-85 317.4 227 73.1
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 1.3e-81 307.0 188 78.2
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 2.2e-81 306.2 242 66.1
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 4.5e-79 298.5 217 68.7
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 2.2e-78 296.2 238 68.1
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 2.9e-78 295.8 189 73.5
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 6.5e-78 294.7 233 63.1
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 2.5e-77 292.7 191 72.8
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 4.2e-77 292.0 188 74.5
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 7.2e-77 291.2 230 64.3
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 2.7e-76 289.3 189 71.4
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.7e-76 289.3 189 71.4
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 4.6e-76 288.5 236 62.7
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.6e-76 288.5 189 71.4
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 6.1e-76 288.1 189 70.9
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.4e-75 287.0 196 71.9
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.8e-75 286.6 189 70.9
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 5.1e-75 285.0 223 63.7
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 5.1e-75 285.0 232 62.5
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 6.7e-75 284.6 198 69.2
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 8.8e-75 284.3 210 66.7
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 1.1e-74 283.9 224 67.4
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 1.1e-74 283.9 189 74.1
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 2.0e-74 283.1 230 62.6
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 2.5e-74 282.7 227 61.7
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 3.3e-74 282.3 214 63.6
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 3.3e-74 282.3 188 70.7
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.3e-73 280.4 207 68.6
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 3.7e-73 278.9 231 63.6
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 6.3e-73 278.1 218 63.8
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 6.3e-73 278.1 224 63.4
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 6.3e-73 278.1 220 66.8
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 8.2e-73 277.7 188 71.8
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.1e-72 277.3 178 75.8
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.8e-72 276.6 215 64.7
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 2.4e-72 276.2 226 61.9
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 5.3e-72 275.0 188 69.7
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 1.2e-71 273.9 174 74.1
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 2.0e-71 273.1 185 71.4
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 2.0e-71 273.1 229 61.1
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.3e-70 270.4 199 66.8
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.3e-70 270.4 188 70.7
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.7e-70 270.0 212 65.1
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 2.9e-70 269.2 218 61.0
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 3.8e-70 268.9 205 66.8
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 5.0e-70 268.5 186 68.3
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 5.0e-70 268.5 188 69.7
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 6.5e-70 268.1 188 69.7
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 2.5e-69 266.2 225 60.0
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 4.2e-69 265.4 219 60.3
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 7.2e-69 264.6 184 67.4
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 9.4e-69 264.2 199 62.3
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.2e-68 263.8 185 69.2
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.6e-68 263.5 188 69.1
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 2.1e-68 263.1 207 60.4
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 2.1e-68 263.1 184 66.8
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.1e-68 263.1 199 64.8
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 2.7e-68 262.7 182 68.1
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 1.0e-67 260.8 186 65.6
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.8e-67 260.0 228 55.3
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 2.3e-67 259.6 194 61.3
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 2.3e-67 259.6 212 58.0
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 6.7e-67 258.1 207 58.9
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 6.7e-67 258.1 180 72.8
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 6.7e-67 258.1 183 66.7
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 8.8e-67 257.7 207 59.4
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 3.3e-66 255.8 199 59.8
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 9.7e-66 254.2 207 58.0
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 2.8e-65 252.7 207 57.0
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.8e-64 250.0 207 57.0
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.8e-64 250.0 223 59.2
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 9.1e-64 247.7 206 63.1
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.7e-62 243.4 197 65.0
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 3.8e-62 242.3 174 69.0
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 5.0e-62 241.9 320 46.9
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 4.2e-61 238.8 174 67.8
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 7.2e-61 238.0 216 57.9
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.5e-58 230.3 177 68.4
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.3e-54 217.2 195 61.0
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 1.5e-53 213.8 156 66.0
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 9.4e-53 211.1 194 55.2
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 2.3e-51 206.5 140 70.0
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.2e-50 204.1 200 57.0
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 1.2e-50 204.1 197 56.9
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.4e-50 202.6 200 56.5
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 6.3e-49 198.4 121 79.3
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 4.1e-48 195.7 160 60.6
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 9.1e-48 194.5 145 65.5
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 2.0e-47 193.4 131 75.6
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 2.2e-46 189.9 185 56.2
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 3.7e-41 172.6 116 70.7
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 4.9e-41 172.2 119 69.7
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.4e-40 170.6 189 50.8
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 2.0e-39 166.8 194 47.4
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 2.5e-37 159.8 155 52.3
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.3e-37 159.5 105 74.3
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.6e-36 157.1 109 70.6
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.6e-36 156.0 168 48.2
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.6e-34 149.8 105 72.4
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.3e-33 147.5 91 74.7
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.1e-32 144.4 98 69.4
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.4e-32 144.1 106 64.2
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 2.0e-26 123.6 145 44.1
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.4e-24 117.5 145 45.5
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 2.5e-21 106.7 95 62.1
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 2.0e-18 97.1 90 61.1
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 4.1e-16 89.4 165 36.4
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.7e-14 84.0 49 75.5
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 5.6e-13 79.0 58 58.6
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 3.4e-10 69.7 44 72.7
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 3.4e-10 69.7 48 66.7
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 6.4e-09 65.5 112 38.4
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 3.2e-08 63.2 95 42.1
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 8.6e-06 55.1 63 47.6


User provided reference genes

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