Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 2.3e-99 365.5 185 100.0
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 2.8e-84 315.5 185 85.9
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 6.4e-81 304.3 185 83.8
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 3.5e-79 298.5 186 82.3
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 1.3e-73 280.0 185 78.4
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 1.1e-72 276.9 185 77.8
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 5.4e-72 274.6 185 74.6
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 2.7e-71 272.3 185 73.0
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 3.0e-70 268.9 183 74.9
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 5.3e-67 258.1 188 69.7
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 1.7e-65 253.1 187 67.4
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.8e-65 251.9 189 69.3
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.8e-65 251.9 189 69.3
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 8.4e-65 250.8 185 66.5
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.1e-64 250.4 185 69.2
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 1.1e-64 250.4 185 70.8
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 2.7e-63 245.7 185 66.5
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 7.9e-63 244.2 154 81.2
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 7.9e-63 244.2 185 67.6
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 2.3e-62 242.7 187 67.9
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.3e-62 242.7 186 69.4
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 3.0e-62 242.3 185 65.9
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 3.0e-62 242.3 186 68.3
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 3.9e-62 241.9 186 69.4
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 1.1e-61 240.4 185 65.9
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 1.5e-61 240.0 154 79.9
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 3.3e-61 238.8 185 66.5
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 3.3e-61 238.8 185 64.3
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 5.6e-61 238.0 186 65.6
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 5.6e-61 238.0 185 65.4
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 1.3e-60 236.9 185 67.6
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 3.7e-60 235.3 185 64.9
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 3.7e-60 235.3 185 64.9
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 1.1e-59 233.8 186 67.2
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.4e-59 233.4 186 67.7
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 1.8e-59 233.0 191 66.5
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 3.1e-59 232.3 186 67.7
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 6.9e-59 231.1 185 64.9
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 9.0e-59 230.7 185 67.6
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 1.5e-58 229.9 188 61.7
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 2.0e-58 229.6 186 64.5
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 2.6e-58 229.2 187 63.1
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 4.5e-58 228.4 187 61.5
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 1.7e-57 226.5 187 63.1
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 2.9e-57 225.7 189 60.8
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 4.9e-57 224.9 189 65.1
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 4.9e-57 224.9 185 62.7
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 1.1e-56 223.8 187 61.0
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 4.2e-56 221.9 187 59.9
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 2.1e-55 219.5 187 62.0
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 2.7e-55 219.2 189 60.8
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 3.5e-55 218.8 188 59.6
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 4.6e-55 218.4 194 61.9
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 1.0e-54 217.2 231 52.4
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 1.0e-54 217.2 185 61.1
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 3.0e-54 215.7 187 60.4
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 3.0e-54 215.7 187 60.4
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 3.0e-54 215.7 185 60.0
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 3.9e-54 215.3 196 60.2
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 8.7e-54 214.2 190 57.9
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 1.5e-53 213.4 185 58.9
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 1.5e-53 213.4 185 59.5
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 1.9e-53 213.0 185 58.4
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 3.3e-53 212.2 188 60.6
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 4.3e-53 211.8 189 60.8
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 7.4e-53 211.1 173 65.3
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 9.6e-53 210.7 189 58.7
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 9.6e-53 210.7 198 55.6
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 9.6e-53 210.7 186 60.8
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 1.3e-52 210.3 201 55.2
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 8.2e-52 207.6 185 58.4
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 1.4e-51 206.8 189 59.3
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 2.4e-51 206.1 189 58.7
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 2.6e-50 202.6 134 76.1
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 2.6e-50 202.6 154 67.5
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 3.4e-50 202.2 140 70.0
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 2.2e-49 199.5 186 55.9
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 2.2e-49 199.5 146 69.9
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 3.8e-49 198.7 207 53.1
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.8e-49 198.7 147 70.1
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 3.8e-49 198.7 190 55.3
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 2.7e-47 192.6 226 50.4
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 3.6e-47 192.2 214 52.3
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 4.6e-47 191.8 144 68.1
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 6.7e-46 188.0 191 56.0
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 8.7e-46 187.6 135 68.9
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 3.3e-45 185.7 169 60.4
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 5.7e-45 184.9 137 67.2
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.3e-44 183.7 137 67.2
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 1.6e-44 183.3 185 53.5
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 1.4e-43 180.3 189 51.9
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 1.7e-41 173.3 188 53.2
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 3.8e-41 172.2 206 50.5
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 1.1e-40 170.6 130 66.9
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 1.4e-40 170.2 152 56.6
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 4.2e-40 168.7 152 59.2
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 4.6e-39 165.2 230 43.5
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 1.1e-37 160.6 136 64.7
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 6.3e-36 154.8 185 49.2
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 8.2e-36 154.5 119 64.7
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 4.1e-35 152.1 133 59.4
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 5.9e-34 148.3 91 78.0
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.5e-29 133.7 74 78.4
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 7.4e-29 131.3 175 43.4
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 2.2e-28 129.8 121 61.2
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 2.2e-28 129.8 223 40.4
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.2e-26 124.0 123 60.2
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.2e-26 124.0 123 60.2
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 1.2e-26 124.0 91 67.0
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 5.9e-26 121.7 112 64.3
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 1.5e-21 107.1 212 34.0
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 2.8e-20 102.8 100 51.0
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 3.4e-13 79.3 112 46.4
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 1.2e-07 60.8 115 41.7
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 2.8e-07 59.7 64 56.2
vmacro02234 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 2.3e-06 56.6 64 53.1
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 3.0e-06 56.2 44 59.1


User provided reference genes

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