Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.2e-208 728.8 379 100.0
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.4e-194 682.9 379 92.9
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.2e-193 679.9 379 91.8
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 8.2e-192 673.7 379 92.1
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 1.2e-187 659.8 380 89.7
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 1.3e-184 649.8 380 88.7
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 1.1e-183 646.7 380 87.9
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 2.4e-183 645.6 380 88.2
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.8e-178 629.4 380 85.5
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 1.3e-173 613.2 403 79.7
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 5.0e-173 611.3 380 83.7
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 3.3e-172 608.6 409 78.5
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.9e-160 568.9 379 76.0
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 3.7e-160 568.5 380 78.2
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 3.7e-160 568.5 379 76.0
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 6.4e-160 567.8 379 76.0
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 6.4e-160 567.8 378 77.5
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 5.4e-159 564.7 377 76.4
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 6.0e-158 561.2 379 75.2
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 3.0e-157 558.9 379 74.9
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 5.0e-157 558.1 379 73.9
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 5.6e-156 554.7 379 74.7
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.2e-155 553.5 407 70.8
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.6e-155 553.1 381 74.8
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 3.6e-155 552.0 379 76.0
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 6.2e-155 551.2 379 74.1
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 8.1e-155 550.8 380 74.5
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.1e-154 550.4 379 73.6
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 1.2e-153 547.0 379 75.5
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.2e-152 542.7 379 73.9
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 6.4e-152 541.2 389 74.3
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 3.2e-151 538.9 379 73.1
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 7.1e-151 537.7 380 72.9
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.2e-150 537.0 385 72.2
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 2.1e-150 536.2 379 73.6
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 7.8e-150 534.3 379 73.1
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 1.0e-149 533.9 383 71.8
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.9e-149 531.9 379 71.8
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 3.9e-149 531.9 380 71.8
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 3.9e-149 531.9 379 71.2
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 3.9e-149 531.9 377 72.9
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 1.5e-148 530.0 373 72.9
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.5e-148 530.0 432 66.2
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 1.5e-148 530.0 380 72.1
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 1.9e-148 529.6 380 71.8
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 2.5e-148 529.3 379 70.7
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 4.3e-148 528.5 379 70.4
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 5.6e-148 528.1 377 70.8
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 3.6e-147 525.4 379 70.7
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 6.2e-147 524.6 379 69.9
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 8.1e-147 524.2 399 69.9
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 8.1e-147 524.2 383 71.0
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 2.4e-146 522.7 379 70.2
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 2.4e-146 522.7 434 64.7
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 4.0e-146 521.9 379 70.2
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 6.8e-146 521.2 380 71.1
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.2e-145 520.4 375 70.4
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.2e-145 520.4 379 70.2
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 2.0e-145 519.6 379 69.9
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.6e-145 519.2 379 69.1
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.4e-145 518.8 380 70.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 3.4e-145 518.8 379 69.1
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 5.8e-145 518.1 377 69.8
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 9.9e-145 517.3 379 69.1
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.3e-144 516.9 379 68.6
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 3.8e-144 515.4 380 70.3
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 6.4e-144 514.6 383 69.2
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 8.4e-144 514.2 380 69.5
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 8.4e-144 514.2 389 67.4
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 1.4e-143 513.5 378 69.0
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.2e-143 512.3 379 68.6
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 4.1e-143 511.9 380 69.5
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 4.1e-143 511.9 380 69.5
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 4.1e-143 511.9 379 68.1
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 9.2e-143 510.8 379 70.4
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 1.2e-142 510.4 379 68.1
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 7.8e-142 507.7 397 66.5
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 1.0e-141 507.3 380 67.1
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 1.0e-141 507.3 356 73.3
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 3.9e-141 505.4 362 72.9
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 9.6e-140 500.7 384 66.7
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 4.7e-139 498.4 404 64.6
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.4e-138 496.9 379 66.8
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 3.1e-138 495.7 432 63.2
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 1.4e-135 486.9 380 65.8
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.9e-135 486.5 386 66.6
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.7e-134 482.6 410 62.4
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 1.0e-133 480.7 382 64.7
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 5.1e-133 478.4 382 64.9
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.6e-132 474.2 379 64.4
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 3.1e-130 469.2 324 73.5
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 2.6e-129 466.1 388 63.1
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.7e-128 463.4 379 64.6
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.4e-127 459.5 379 62.3
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 2.7e-126 456.1 459 55.1
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 3.4e-121 439.1 384 61.5
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 5.8e-121 438.3 331 67.4
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 9.9e-121 437.6 382 61.3
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 7.4e-116 421.4 276 79.3
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 8.2e-115 417.9 413 57.4
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.5e-113 413.7 382 57.9
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.0e-112 411.0 382 58.6
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 2.1e-110 403.3 277 74.4
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 7.6e-105 384.8 387 54.0
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.5e-97 360.5 388 53.1
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 1.2e-70 271.2 274 55.1
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 1.0e-64 251.5 413 39.2
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.6e-60 236.9 158 72.8
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 4.4e-60 236.1 460 35.4
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.3e-59 232.3 158 72.2
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.4e-58 229.2 167 68.3
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 2.7e-49 200.3 339 38.1
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.1e-47 194.9 167 59.9
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.4e-45 188.0 147 67.3
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 3.2e-42 176.8 140 61.4
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.0e-40 170.2 129 69.0
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 9.9e-36 155.2 124 63.7
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.2e-35 154.1 126 66.7
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 1.1e-31 141.7 102 64.7
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 2.2e-27 127.5 103 59.2
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.9e-26 124.4 91 69.2
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 3.2e-26 123.6 85 69.4
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 1.4e-10 71.6 39 87.2
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 3.2e-10 70.5 39 84.6
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 2.7e-09 67.4 124 37.1
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 8.7e-08 62.4 162 28.4


User provided reference genes

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