Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19755_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 8.2e-48 193.4 95 100.0
Ca_09297_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 6.7e-34 147.1 83 86.7
Psat3g013080 Pisum sativum HOM05D002981 ORTHO05D003725 7.7e-30 133.7 83 75.9
TPR.G1663 Trifolium pratense HOM05D002981 ORTHO05D003725 7.7e-30 133.7 82 79.3
Medtr7g112040 Medicago truncatula HOM05D002981 ORTHO05D003725 1.5e-28 129.4 82 75.6
Nn3g21634 Nelumbo nucifera HOM05D002981 ORTHO05D003725 2.5e-28 128.6 83 74.7
Glyma.03G232000 Glycine max HOM05D002981 ORTHO05D003725 9.4e-28 126.7 83 73.5
Hund21746 Selenicereus undatus HOM05D002981 ORTHO05D003725 9.4e-28 126.7 83 72.3
CSS0028783 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 1.6e-27 125.9 85 69.4
VMungo1383G3526 Vigna mungo HOM05D002981 ORTHO05D003725 1.6e-27 125.9 83 73.5
Gohir.A08G118600 Gossypium hirsutum HOM05D002981 ORTHO05D003725 2.1e-27 125.6 83 69.9
Gohir.D08G139400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 2.1e-27 125.6 83 69.9
Ca_04979_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 2.7e-27 125.2 88 72.7
Lj1g0022270 Lotus japonicus HOM05D002981 ORTHO05D003725 2.7e-27 125.2 83 72.3
Dinv30871 Davidia involucrata HOM05D002981 ORTHO05D003725 3.6e-27 124.8 83 71.1
Glyma.19G229000 Glycine max HOM05D002981 ORTHO05D003725 3.6e-27 124.8 83 72.3
Duzib138G0226 Durio zibethinus HOM05D002981 ORTHO05D003725 4.7e-27 124.4 83 69.9
Ah.06g188900 Amaranthus hybridus HOM05D002981 ORTHO05D003725 8.0e-27 123.6 83 69.9
Gorai.004G143300 Gossypium raimondii HOM05D002981 ORTHO05D003725 1.0e-26 123.2 83 68.7
Hma1.2p1_0008F-1.1_g005760 Hydrangea macrophylla HOM05D002981 ORTHO05D003725 1.0e-26 123.2 83 71.1
GSVIVG01031219001 Vitis vinifera HOM05D002981 ORTHO05D003725 1.0e-26 123.2 83 68.7
TWI75G0141 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 1.4e-26 122.9 83 68.7
unitig_26.g10138 Utricularia gibba HOM05D002981 ORTHO05D003725 1.4e-26 122.9 83 67.5
Aqoxy2G02802 Aquilegia oxysepala HOM05D002981 ORTHO05D003725 1.8e-26 122.5 78 71.8
Lalb_Chr02g0146691 Lupinus albus HOM05D002981 ORTHO05D003725 1.8e-26 122.5 83 69.9
Potri.002G198300 Populus trichocarpa HOM05D002981 ORTHO05D003725 1.8e-26 122.5 83 71.1
TAR362G0641 Trochodendron aralioides HOM05D002981 ORTHO05D003725 1.8e-26 122.5 83 69.9
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 2.3e-26 122.1 83 68.7
Nn4g25650 Nelumbo nucifera HOM05D002981 ORTHO05D003725 2.3e-26 122.1 83 68.7
TWI18G0728 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 2.3e-26 122.1 83 68.7
Gohir.A12G126400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 3.0e-26 121.7 83 69.9
VMungo0647G1826 Vigna mungo HOM05D002981 ORTHO05D003725 3.0e-26 121.7 86 68.6
CSS0025736 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 4.0e-26 121.3 83 68.7
Phvul.001G225600 Phaseolus vulgaris HOM05D002981 ORTHO05D003725 4.0e-26 121.3 83 69.9
Duzib211G0560 Durio zibethinus HOM05D002981 ORTHO05D003725 5.2e-26 120.9 83 67.5
Peaxi162Scf00673g00127 Petunia axillaris HOM05D002981 ORTHO05D003725 5.2e-26 120.9 83 69.9
THA.LOC104802194 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 5.2e-26 120.9 83 67.5
CAN.G1273.1 Capsicum annuum HOM05D002981 ORTHO05D003725 6.7e-26 120.6 83 67.5
PSO210G1046 Papaver somniferum HOM05D002981 ORTHO05D003725 6.7e-26 120.6 83 69.9
PSO761G0326 Papaver somniferum HOM05D002981 ORTHO05D003725 6.7e-26 120.6 83 69.9
Potri.014G122800 Populus trichocarpa HOM05D002981 ORTHO05D003725 6.7e-26 120.6 83 69.9
Solyc01g100320.3 Solanum lycopersicum HOM05D002981 ORTHO05D003725 6.7e-26 120.6 83 68.7
Sopen01g043830 Solanum pennellii HOM05D002981 ORTHO05D003725 6.7e-26 120.6 83 68.7
PGSC0003DMG400002779 Solanum tuberosum HOM05D002981 ORTHO05D003725 6.7e-26 120.6 83 67.5
Thecc.01G310600 Theobroma cacao HOM05D002981 ORTHO05D003725 6.7e-26 120.6 83 68.7
DCAR_029360 Daucus carota HOM05D002981 ORTHO05D003725 8.8e-26 120.2 83 67.5
Gohir.D12G129900 Gossypium hirsutum HOM05D002981 ORTHO05D003725 8.8e-26 120.2 83 68.7
Gorai.008G141100 Gossypium raimondii HOM05D002981 ORTHO05D003725 8.8e-26 120.2 83 68.7
SGA_v2.0_scaffold81G26125 Striga asiatica HOM05D002981 ORTHO05D003725 8.8e-26 120.2 83 68.7
AUR62000684 Chenopodium quinoa HOM05D002981 ORTHO05D003725 1.2e-25 119.8 87 64.4
SalBow3G0105 Salvia bowleyana HOM05D002981 ORTHO05D003725 1.2e-25 119.8 83 67.5
THA.LOC104817468 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 1.2e-25 119.8 83 67.5
TAR633G1423 Trochodendron aralioides HOM05D002981 ORTHO05D003725 1.2e-25 119.8 85 67.1
arahy.Tifrunner.gnm1.ann1.FDR7V2 Arachis hypogaea HOM05D002981 ORTHO05D003725 1.5e-25 119.4 83 68.7
arahy.Tifrunner.gnm1.ann1.VAQ4DL Arachis hypogaea HOM05D002981 ORTHO05D003725 1.5e-25 119.4 83 68.7
Lj9C217G8 Lonicera japonica HOM05D002981 ORTHO05D003725 1.5e-25 119.4 83 67.5
Rhsim11G0094000 Rhododendron simsii HOM05D002981 ORTHO05D003725 1.5e-25 119.4 83 68.7
Hund07135 Selenicereus undatus HOM05D002981 ORTHO05D003725 1.5e-25 119.4 83 69.9
Dinv24424 Davidia involucrata HOM05D002981 ORTHO05D003725 2.0e-25 119.0 83 67.5
Eucgr.K03531 Eucalyptus grandis HOM05D002981 ORTHO05D003725 2.0e-25 119.0 83 67.5
TWI56G0814 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 2.0e-25 119.0 78 64.1
Atru.chr5.1047 Acer truncatum HOM05D002981 ORTHO05D003725 2.6e-25 118.6 83 66.3
MSTRG.5139 Avicennia marina HOM05D002981 ORTHO05D003725 2.6e-25 118.6 83 65.1
Duzib133G0744 Durio zibethinus HOM05D002981 ORTHO05D003725 2.6e-25 118.6 83 66.3
Gohir.D07G131800 Gossypium hirsutum HOM05D002981 ORTHO05D003725 2.6e-25 118.6 83 68.7
Gorai.001G143100 Gossypium raimondii HOM05D002981 ORTHO05D003725 2.6e-25 118.6 83 68.7
QL03p018289 Quercus lobata HOM05D002981 ORTHO05D003725 2.6e-25 118.6 83 68.7
Sabra14G0091200 Salix brachista HOM05D002981 ORTHO05D003725 2.6e-25 118.6 83 69.9
EL10Ac4g09830 Beta vulgaris HOM05D002981 ORTHO05D003725 3.3e-25 118.2 83 67.5
AUR62005272 Chenopodium quinoa HOM05D002981 ORTHO05D003725 3.3e-25 118.2 83 66.3
Manes.09G175600 Manihot esculenta HOM05D002981 ORTHO05D003725 3.3e-25 118.2 83 65.1
BcaB01g03165 Brassica carinata HOM05D002981 ORTHO05D003725 4.4e-25 117.9 83 66.3
DCAR_005415 Daucus carota HOM05D002981 ORTHO05D003725 4.4e-25 117.9 83 66.3
SalBow7G4351 Salvia bowleyana HOM05D002981 ORTHO05D003725 4.4e-25 117.9 83 65.1
Sc16g0008930 Simmondsia chinensis HOM05D002981 ORTHO05D003725 4.4e-25 117.9 83 66.3
BcaB02g08769 Brassica carinata HOM05D002981 ORTHO05D003725 5.7e-25 117.5 83 66.3
A03p25980 Brassica napus HOM05D002981 ORTHO05D003725 5.7e-25 117.5 83 66.3
BraA03t11815Z Brassica rapa HOM05D002981 ORTHO05D003725 5.7e-25 117.5 83 66.3
HanXRQChr10g0299231 Helianthus annuus HOM05D002981 ORTHO05D003725 5.7e-25 117.5 83 62.7
Lj5A337G17 Lonicera japonica HOM05D002981 ORTHO05D003725 5.7e-25 117.5 83 65.1
Nitab4.5_0009033g0020 Nicotiana tabacum HOM05D002981 ORTHO05D003725 5.7e-25 117.5 83 67.5
Cpa.g.sc18.9 Carica papaya HOM05D002981 ORTHO05D003725 7.5e-25 117.1 83 66.3
Ciclev10020618m.g Citrus clementina HOM05D002981 ORTHO05D003725 7.5e-25 117.1 83 66.3
Migut.N02114 Erythranthe guttata HOM05D002981 ORTHO05D003725 7.5e-25 117.1 83 63.9
Gohir.A07G127500 Gossypium hirsutum HOM05D002981 ORTHO05D003725 7.5e-25 117.1 77 68.8
Oeu053701.1 Olea europaea HOM05D002981 ORTHO05D003725 7.5e-25 117.1 83 67.5
TAR365G0113 Trochodendron aralioides HOM05D002981 ORTHO05D003725 7.5e-25 117.1 83 65.1
Gorai.007G124200 Gossypium raimondii HOM05D002981 ORTHO05D003725 9.7e-25 116.7 83 66.3
CANSAT54G0071 Cannabis sativa HOM05D002981 ORTHO05D003725 1.3e-24 116.3 83 65.1
CARHR142860 Cardamine hirsuta HOM05D002981 ORTHO05D003725 1.3e-24 116.3 83 66.3
Ca_10298_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 1.3e-24 116.3 83 66.3
Nitab4.5_0000368g0270 Nicotiana tabacum HOM05D002981 ORTHO05D003725 1.3e-24 116.3 83 67.5
Sabra02G0159300 Salix brachista HOM05D002981 ORTHO05D003725 1.3e-24 116.3 83 68.7
vmacro01554 Vaccinium macrocarpon HOM05D002981 ORTHO05D003725 1.3e-24 116.3 83 65.1
BcaC01g05028 Brassica carinata HOM05D002981 ORTHO05D003725 1.7e-24 115.9 83 65.1
C03p30980 Brassica napus HOM05D002981 ORTHO05D003725 1.7e-24 115.9 83 65.1
C04p00410 Brassica napus HOM05D002981 ORTHO05D003725 1.7e-24 115.9 83 65.1
BolC4t21686H Brassica oleracea HOM05D002981 ORTHO05D003725 1.7e-24 115.9 83 65.1
Aa31LG1G28770 Aethionema arabicum HOM05D002981 ORTHO05D003725 2.2e-24 115.5 78 66.7
ATR0706G068 Amborella trichopoda HOM05D002981 ORTHO05D003725 2.2e-24 115.5 83 65.1
AL4G47030 Arabidopsis lyrata HOM05D002981 ORTHO05D003725 2.2e-24 115.5 83 66.3
AT2G47470 Arabidopsis thaliana HOM05D002981 ORTHO05D003725 2.2e-24 115.5 83 66.3
Cc02_g34820 Coffea canephora HOM05D002981 ORTHO05D003725 2.2e-24 115.5 83 65.1
Medtr1g087520 Medicago truncatula HOM05D002981 ORTHO05D003725 2.2e-24 115.5 83 66.3
A05p00460 Brassica napus HOM05D002981 ORTHO05D003725 2.8e-24 115.2 83 63.9
BraA05t19044Z Brassica rapa HOM05D002981 ORTHO05D003725 2.8e-24 115.2 83 63.9
Glyma.10G014700 Glycine max HOM05D002981 ORTHO05D003725 2.8e-24 115.2 83 67.5
Manes.05G002000 Manihot esculenta HOM05D002981 ORTHO05D003725 2.8e-24 115.2 83 67.5
Psat6g163280 Pisum sativum HOM05D002981 ORTHO05D003725 2.8e-24 115.2 83 65.1
QL12p028974 Quercus lobata HOM05D002981 ORTHO05D003725 2.8e-24 115.2 83 63.9
C04p39530 Brassica napus HOM05D002981 ORTHO05D003725 3.7e-24 114.8 83 63.9
BolC4t25518H Brassica oleracea HOM05D002981 ORTHO05D003725 3.7e-24 114.8 83 63.9
FAN02G4218 Fragaria x ananassa HOM05D002981 ORTHO05D003725 3.7e-24 114.8 83 65.1
FAN05G2722 Fragaria x ananassa HOM05D002981 ORTHO05D003725 3.7e-24 114.8 83 65.1
FAN09G2340 Fragaria x ananassa HOM05D002981 ORTHO05D003725 3.7e-24 114.8 83 65.1
Glyma.02G014000 Glycine max HOM05D002981 ORTHO05D003725 3.7e-24 114.8 83 66.3
unitig_21.g20026 Utricularia gibba HOM05D002981 ORTHO05D003725 3.7e-24 114.8 83 65.1
Carub.0004s3019 Capsella rubella HOM05D002981 ORTHO05D003725 4.8e-24 114.4 83 65.1
Haze_05013 Corylus avellana HOM05D002981 ORTHO05D003725 4.8e-24 114.4 83 62.7
Thhalv10001515m.g Eutrema salsugineum HOM05D002981 ORTHO05D003725 4.8e-24 114.4 83 63.9
FvH4_6g07230 Fragaria vesca HOM05D002981 ORTHO05D003725 4.8e-24 114.4 83 65.1
FAN14G0083 Fragaria x ananassa HOM05D002981 ORTHO05D003725 4.8e-24 114.4 83 65.1
PGR044G1530 Punica granatum HOM05D002981 ORTHO05D003725 6.3e-24 114.0 83 62.7
TPR.G19768 Trifolium pratense HOM05D002981 ORTHO05D003725 6.3e-24 114.0 83 65.1
CiPaw.08G156600 Carya illinoinensis HOM05D002981 ORTHO05D003725 8.2e-24 113.6 83 63.9
ECA234G2827 Erigeron canadensis HOM05D002981 ORTHO05D003725 8.2e-24 113.6 83 61.4
Lj5g0008352 Lotus japonicus HOM05D002981 ORTHO05D003725 8.2e-24 113.6 83 66.3
Lalb_Chr21g0309481 Lupinus albus HOM05D002981 ORTHO05D003725 8.2e-24 113.6 83 66.3
MD04G1195300 Malus domestica HOM05D002981 ORTHO05D003725 8.2e-24 113.6 83 63.9
Lsat_1_v5_gn_5_102801 Lactuca sativa HOM05D002981 ORTHO05D003725 1.1e-23 113.2 83 59.0
Prupe.6G315000 Prunus persica HOM05D002981 ORTHO05D003725 1.1e-23 113.2 83 62.7
Rhsim05G0133600 Rhododendron simsii HOM05D002981 ORTHO05D003725 1.1e-23 113.2 83 62.7
Sed0000157 Sechium edule HOM05D002981 ORTHO05D003725 1.1e-23 113.2 78 65.4
MD12G1207400 Malus domestica HOM05D002981 ORTHO05D003725 1.4e-23 112.8 83 61.4
Phvul.007G215900 Phaseolus vulgaris HOM05D002981 ORTHO05D003725 1.4e-23 112.8 83 65.1
RcHm_v2.0_Chr3g0456861 Rosa chinensis HOM05D002981 ORTHO05D003725 1.4e-23 112.8 83 63.9
CiPaw.07G115400 Carya illinoinensis HOM05D002981 ORTHO05D003725 1.8e-23 112.5 83 63.9
CsaV3_7G029820 Cucumis sativus L. HOM05D002981 ORTHO05D003725 1.8e-23 112.5 83 62.7
SGA_v2.0_scaffold80G25880 Striga asiatica HOM05D002981 ORTHO05D003725 3.1e-23 111.7 83 65.1
Os01g0339900 Oryza sativa ssp. japonica HOM05D002981 ORTHO05D003725 4.1e-23 111.3 78 62.8
Sp4g29410 Schrenkiella parvula HOM05D002981 ORTHO05D003725 4.1e-23 111.3 83 62.7
HPP92_016960 Vanilla planifolia HOM05D002981 ORTHO05D003725 4.1e-23 111.3 83 62.7
CDE09G1190 Ceratophyllum demersum HOM05D002981 ORTHO05D003725 5.3e-23 110.9 83 59.0
VMungo0720G0399 Vigna mungo HOM05D002981 ORTHO05D003725 5.3e-23 110.9 83 63.9
MSTRG.27951 Avicennia marina HOM05D002981 ORTHO05D003725 7.0e-23 110.5 83 62.7
Os05g0156300 Oryza sativa ssp. japonica HOM05D002981 ORTHO05D003725 1.2e-22 109.8 83 62.7
ECA234G0860 Erigeron canadensis HOM05D002981 ORTHO05D003725 1.6e-22 109.4 83 60.2
ECA234G4491 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.0e-22 109.0 83 59.0
Zm00001eb282710 Zea mays HOM05D002981 ORTHO05D003725 2.7e-22 108.6 83 60.2
SEGI_15151 Sequoiadendron giganteum HOM05D002981 ORTHO05D003725 3.5e-22 108.2 78 62.8
CDE02G3360 Ceratophyllum demersum HOM05D002981 ORTHO05D003725 4.5e-22 107.8 83 59.0
Zm00001eb179930 Zea mays HOM05D013194 ORTHO05D015061 4.5e-22 107.8 83 60.2
arahy.Tifrunner.gnm1.ann1.LY6DXQ Arachis hypogaea HOM05D002981 ORTHO05D003725 7.7e-22 107.1 83 62.7
arahy.Tifrunner.gnm1.ann1.PTRY8R Arachis hypogaea HOM05D002981 ORTHO05D003725 7.7e-22 107.1 83 62.7
ClCG09G005250 Citrullus lanatus HOM05D002981 ORTHO05D003725 1.0e-21 106.7 83 61.4
ECA236G5052 Erigeron canadensis HOM05D002981 ORTHO05D003725 2.9e-21 105.1 83 57.8
MELO3C015939.2 Cucumis melo HOM05D002981 ORTHO05D003725 6.5e-21 104.0 83 60.2
Zm00001eb131360 Zea mays HOM05D002981 ORTHO05D003725 2.5e-20 102.1 83 57.8
Sed0023511 Sechium edule HOM05D002981 ORTHO05D003725 7.2e-20 100.5 83 55.4
HPP92_015959 Vanilla planifolia HOM05D002981 ORTHO05D003725 3.0e-18 95.1 83 53.0
SHI12762 Sapria himalayana HOM05D002981 ORTHO05D003725 8.8e-18 93.6 83 54.2
Peaxi162Scf00071g00438 Petunia axillaris HOM05D002981 ORTHO05D003725 1.2e-17 93.2 83 56.6
vmacro19723 Vaccinium macrocarpon HOM05D002981 ORTHO05D003725 3.4e-17 91.7 83 55.4
Zm00001eb418550 Zea mays HOM05D002981 ORTHO05D003725 2.8e-16 88.6 89 50.6
DCAR_025272 Daucus carota HOM05D002981 ORTHO05D003725 3.7e-16 88.2 74 52.7
CBR_g41286 Chara braunii HOM05D002981 ORTHO05D003725 6.3e-16 87.4 83 47.0
SMO201G0065 Selaginella moellendorffii HOM05D002981 ORTHO05D003725 6.3e-16 87.4 77 51.9
Pp3c4_19910 Physcomitrium patens HOM05D002981 ORTHO05D003725 8.3e-16 87.0 78 47.4
CBR_g41277 Chara braunii HOM05D002981 ORTHO05D003725 1.8e-15 85.9 83 45.8
Gohir.D11G116000 Gossypium hirsutum HOM05D002981 ORTHO05D003725 1.8e-15 85.9 52 71.2
Lsat_1_v5_gn_7_73501 Lactuca sativa HOM05D002981 ORTHO05D003725 4.1e-15 84.7 86 44.2
Zm00001eb235580 Zea mays HOM05D002981 ORTHO05D003725 4.1e-15 84.7 53 67.9
Sc09g0002680 Simmondsia chinensis HOM05D002981 ORTHO05D003725 9.1e-15 83.6 52 67.3
SEGI_01194 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 2.7e-14 82.0 60 61.7
SMO270G0056 Selaginella moellendorffii HOM05D002981 ORTHO05D003725 5.9e-14 80.9 83 49.4
CBR_g35008 Chara braunii HOM05D002981 ORTHO05D003725 1.7e-13 79.3 75 48.0
Haze_04080 Corylus avellana HOM05D002981 ORTHO05D003725 5.0e-13 77.8 76 56.6
Mapoly0016s0144 Marchantia polymorpha HOM05D002981 ORTHO05D003725 7.2e-12 73.9 78 41.0
RcHm_v2.0_Chr6g0255891 Rosa chinensis HOM05D002981 ORTHO05D003725 1.6e-11 72.8 52 61.5
VMungo0251G1886 Vigna mungo HOM05D002981 ORTHO05D003725 2.1e-11 72.4 74 52.7
HPP92_015970 Vanilla planifolia HOM05D002981 ORTHO05D003725 1.3e-08 63.2 82 40.2
Lalb_Chr06g0166671 Lupinus albus HOM05D002981 ORTHO05D003725 1.8e-07 59.3 36 66.7
HPP92_015969 Vanilla planifolia HOM05D002981 ORTHO05D003725 1.6e-06 56.2 83 38.6
AagrBONN_evm.TU.Sc2ySwM_228.808 Anthoceros agrestis HOM05D002981 ORTHO05D003725 7.8e-06 53.9 54 44.4
Cfa023759 Carpinus fangiana HOM05D002981 ORTHO05D003725 7.8e-06 53.9 73 32.9


User provided reference genes

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