Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 7.1e-128 460.7 247 100.0
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 1.2e-79 300.4 239 69.9
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 2.8e-79 299.3 238 70.6
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 8.9e-78 294.3 239 67.8
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 3.5e-74 282.3 237 66.7
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 7.8e-74 281.2 239 64.9
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 6.8e-70 268.1 236 61.0
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 2.4e-67 259.6 244 60.2
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 1.3e-65 253.8 238 58.4
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 5.0e-65 251.9 238 56.3
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 8.6e-65 251.1 231 61.0
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 1.8e-62 243.4 238 55.5
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 5.2e-62 241.9 238 55.0
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 5.2e-62 241.9 237 54.9
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 4.4e-61 238.8 239 56.9
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 9.8e-61 237.7 238 53.8
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 2.2e-60 236.5 238 55.5
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 2.2e-60 236.5 239 56.5
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 1.9e-59 233.4 238 50.8
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 2.4e-59 233.0 238 52.1
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 9.2e-59 231.1 238 52.1
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 1.6e-58 230.3 238 52.1
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.6e-58 230.3 239 54.8
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 2.1e-58 229.9 239 54.8
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 2.7e-58 229.6 239 54.8
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 2.7e-58 229.6 223 58.3
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 4.6e-58 228.8 239 54.4
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 1.0e-57 227.6 238 49.6
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 1.7e-57 226.9 240 52.9
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 1.1e-56 224.2 238 50.8
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 2.1e-55 219.9 237 53.6
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 2.8e-55 219.5 237 51.5
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 4.7e-55 218.8 239 49.8
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 1.1e-54 217.6 239 53.1
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 2.3e-54 216.5 226 53.5
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 4.0e-54 215.7 223 52.5
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 5.2e-54 215.3 241 50.2
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 6.8e-54 214.9 223 52.5
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 8.9e-54 214.5 238 49.6
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 1.5e-53 213.8 241 48.5
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 2.0e-53 213.4 239 49.0
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 4.4e-53 212.2 238 50.4
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.2e-52 209.9 224 54.5
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 3.2e-51 206.1 237 49.4
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 7.1e-51 204.9 224 50.9
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 7.1e-51 204.9 246 49.2
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 4.6e-50 202.2 226 48.2
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 1.3e-49 200.7 240 48.8
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 3.9e-49 199.1 237 48.5
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 5.1e-49 198.7 208 54.8
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 8.6e-49 198.0 238 46.6
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.9e-48 196.8 223 49.3
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 2.5e-48 196.4 237 45.1
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.5e-48 196.4 237 48.1
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 3.3e-48 196.1 245 47.8
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 9.6e-48 194.5 238 47.1
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 9.6e-48 194.5 238 47.5
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 1.6e-47 193.7 238 47.1
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 1.6e-47 193.7 238 45.8
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 8.1e-47 191.4 230 48.3
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 1.4e-46 190.7 238 47.5
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 1.8e-46 190.3 236 43.2
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 4.0e-46 189.1 238 47.1
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 4.0e-46 189.1 239 45.6
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 6.8e-46 188.3 235 42.1
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 6.8e-46 188.3 236 42.8
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 1.5e-45 187.2 223 48.9
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 2.6e-45 186.4 235 45.1
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 2.6e-45 186.4 194 52.6
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 3.4e-45 186.0 238 44.5
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 4.4e-45 185.7 236 43.6
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 5.8e-45 185.3 236 44.5
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 7.6e-45 184.9 236 43.2
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 9.9e-45 184.5 271 44.3
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 1.7e-44 183.7 236 43.6
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 3.8e-44 182.6 236 42.8
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 3.8e-44 182.6 220 45.9
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 8.4e-44 181.4 236 41.5
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 8.4e-44 181.4 236 41.5
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 1.4e-43 180.6 236 42.4
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 1.9e-43 180.3 202 53.0
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 3.2e-43 179.5 224 47.3
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 3.2e-43 179.5 181 56.9
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 7.8e-42 174.9 236 41.1
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 3.0e-41 172.9 228 44.3
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 5.1e-41 172.2 238 42.9
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 3.3e-40 169.5 239 43.9
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 9.6e-40 167.9 239 43.5
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 2.1e-39 166.8 176 55.1
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 4.9e-36 155.6 234 39.3
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 4.9e-36 155.6 184 49.5
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 6.4e-36 155.2 199 45.2
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 1.4e-35 154.1 243 39.1
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 5.4e-35 152.1 237 36.7
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 7.1e-35 151.8 201 45.3
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 9.3e-35 151.4 238 38.7
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 3.9e-33 146.0 215 40.5
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 5.1e-33 145.6 115 64.3
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 4.3e-32 142.5 225 40.4
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.1e-30 137.9 117 64.1
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 4.0e-30 136.0 226 36.3
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 2.0e-29 133.7 231 35.5
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 3.5e-26 122.9 167 42.5
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 2.3e-25 120.2 223 37.2
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 3.9e-25 119.4 101 63.4
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 5.6e-24 115.5 149 44.3
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 1.3e-23 114.4 97 61.9
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 1.3e-23 114.4 181 38.7
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 6.2e-23 112.1 108 53.7
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 3.1e-22 109.8 184 38.0
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 3.1e-22 109.8 87 64.4
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 6.9e-22 108.6 96 57.3
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 6.9e-22 108.6 195 33.8
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.9e-20 102.4 190 35.8
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 9.3e-19 98.2 84 58.3
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 8.7e-17 91.7 66 65.2
RcHm_v2.0_Chr3g0481391 Rosa chinensis HOM05D006640 ORTHO05D008078 8.7e-17 91.7 84 57.1
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 4.3e-16 89.4 224 28.1
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 5.7e-16 89.0 193 32.1
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 1.3e-12 77.8 229 24.9
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 5.0e-12 75.9 104 38.5
Phvul.006G060400 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 2.1e-10 70.5 45 75.6
FvH4_6g22960 Fragaria vesca HOM05D006640 ORTHO05D008078 8.7e-09 65.1 49 63.3
Aqoxy2G03351 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.9e-08 63.9 59 55.9
MD08G1245200 Malus domestica HOM05D006640 ORTHO05D008078 4.3e-08 62.8 38 73.7
vmacro03672 Vaccinium macrocarpon HOM05D002991 ORTHO05D003480 8.2e-07 58.5 72 45.8


User provided reference genes

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