Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19707_v3 Cicer arietinum L. HOM05D001544 ORTHO05D005712 8.1e-79 297.0 147 100.0
Psat7g226160 Pisum sativum HOM05D001544 ORTHO05D005712 1.9e-56 222.6 147 76.2
TPR.G34176 Trifolium pratense HOM05D001544 ORTHO05D005712 4.1e-54 214.9 147 75.5
Lj3g0003276 Lotus japonicus HOM05D001544 ORTHO05D005712 6.9e-54 214.2 147 73.5
Lalb_Chr01g0002161 Lupinus albus HOM05D001544 ORTHO05D005712 2.0e-53 212.6 145 75.9
Medtr4g032740 Medicago truncatula HOM05D001544 ORTHO05D005712 2.0e-53 212.6 150 73.3
arahy.Tifrunner.gnm1.ann1.3WL649 Arachis hypogaea HOM05D001544 ORTHO05D005712 9.7e-48 193.7 158 64.6
Glyma.11G111600 Glycine max HOM05D001544 ORTHO05D005712 9.4e-43 177.2 141 68.1
Lalb_Chr19g0138931 Lupinus albus HOM05D001544 ORTHO05D005712 2.3e-41 172.6 116 74.1
Phvul.011G039500 Phaseolus vulgaris HOM05D001544 ORTHO05D005712 3.3e-40 168.7 141 66.0
Glyma.01G006900 Glycine max HOM05D001544 ORTHO05D005712 4.4e-40 168.3 141 65.2
Lj3g0002354 Lotus japonicus HOM05D001544 ORTHO05D005712 1.8e-38 162.9 148 59.5
Gohir.D02G220200 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.0e-36 157.1 148 54.7
Gorai.005G248100 Gossypium raimondii HOM05D001544 ORTHO05D005712 1.0e-36 157.1 148 54.7
Prupe.8G085800 Prunus persica HOM05D001544 ORTHO05D005712 2.9e-36 155.6 150 53.3
GSVIVG01024183001 Vitis vinifera HOM05D001544 ORTHO05D005712 6.5e-36 154.5 165 53.3
Gohir.A03G198800 Gossypium hirsutum HOM05D001544 ORTHO05D005712 8.5e-36 154.1 148 54.1
QL11p046076 Quercus lobata HOM05D001544 ORTHO05D005712 1.1e-35 153.7 149 53.7
Thecc.02G076200 Theobroma cacao HOM05D001544 ORTHO05D005712 1.5e-35 153.3 147 53.1
Nn5g29207 Nelumbo nucifera HOM05D001544 ORTHO05D002732 2.5e-35 152.5 149 52.3
arahy.Tifrunner.gnm1.ann1.3TM7ML Arachis hypogaea HOM05D001544 ORTHO05D005712 5.5e-35 151.4 124 64.5
MD10G1064100 Malus domestica HOM05D001544 ORTHO05D005712 9.4e-35 150.6 150 51.3
Duzib132G0442 Durio zibethinus HOM05D001544 ORTHO05D005712 1.2e-34 150.2 147 52.4
MELO3C023351.2 Cucumis melo HOM05D001544 ORTHO05D005712 2.7e-34 149.1 147 55.8
CsaV3_2G015260 Cucumis sativus L. HOM05D001544 ORTHO05D005712 2.7e-34 149.1 147 55.8
Sed0017058 Sechium edule HOM05D001544 ORTHO05D005712 2.7e-34 149.1 151 53.6
TWI79G0125 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 2.3e-33 146.0 144 52.1
Hund14027 Selenicereus undatus HOM05D001544 ORTHO05D005712 3.0e-33 145.6 155 51.6
CiPaw.06G128900 Carya illinoinensis HOM05D001544 ORTHO05D005712 5.2e-33 144.8 147 54.4
TAR625G1395 Trochodendron aralioides HOM05D001544 ORTHO05D005712 5.2e-33 144.8 151 51.7
Ciclev10029261m.g Citrus clementina HOM05D001544 ORTHO05D005712 1.2e-32 143.7 151 51.0
Sc03g0003410 Simmondsia chinensis HOM05D001544 ORTHO05D005712 2.0e-32 142.9 150 48.7
Sed0002010 Sechium edule HOM05D001544 ORTHO05D005712 3.3e-32 142.1 152 50.7
Atru.chr5.3135 Acer truncatum HOM05D001544 ORTHO05D005712 5.7e-32 141.4 157 49.0
ClCG11G003920 Citrullus lanatus HOM05D001544 ORTHO05D005712 9.7e-32 140.6 147 54.4
PGSC0003DMG401022539 Solanum tuberosum HOM05D001544 ORTHO05D005712 2.8e-31 139.0 144 51.4
Nitab4.5_0000753g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 6.3e-31 137.9 144 49.3
Cfa005097 Carpinus fangiana HOM05D001544 ORTHO05D005712 8.2e-31 137.5 144 51.4
TWI75G0115 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 1.1e-30 137.1 145 50.3
Aqoxy5G01497 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 1.4e-30 136.7 150 49.3
Eucgr.G01724 Eucalyptus grandis HOM05D001544 ORTHO05D005712 2.4e-30 136.0 151 47.0
Hma1.2p1_0266F.1_g106940 Hydrangea macrophylla HOM05D001544 ORTHO05D005712 2.4e-30 136.0 139 48.2
Solyc03g033650.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 2.4e-30 136.0 144 48.6
FvH4_2g10310 Fragaria vesca HOM05D001544 ORTHO05D005712 3.1e-30 135.6 147 49.0
CANSAT11G1780 Cannabis sativa HOM05D001544 ORTHO05D005712 4.1e-30 135.2 160 48.8
Sopen03g006440 Solanum pennellii HOM05D001544 ORTHO05D005712 4.1e-30 135.2 144 48.6
Aqoxy6G02390 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 5.3e-30 134.8 146 48.6
HanXRQChr14g0441601 Helianthus annuus HOM05D001544 ORTHO05D005712 5.3e-30 134.8 144 47.2
Nitab4.5_0010830g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 5.3e-30 134.8 147 49.0
Cpa.g.sc6.211 Carica papaya HOM05D001544 ORTHO05D005712 9.1e-30 134.0 151 48.3
FAN15G2093 Fragaria x ananassa HOM05D001544 ORTHO05D005712 9.1e-30 134.0 147 49.0
SGA_v2.0_scaffold2G01246 Striga asiatica HOM05D001544 ORTHO05D005712 1.6e-29 133.3 167 43.1
VMungo1127G0458 Vigna mungo HOM05D001544 ORTHO05D005712 1.6e-29 133.3 141 52.5
Dinv40055 Davidia involucrata HOM05D001544 ORTHO05D005712 2.0e-29 132.9 147 49.0
RcHm_v2.0_Chr6g0267511 Rosa chinensis HOM05D001544 ORTHO05D005712 2.0e-29 132.9 147 46.9
PGR042G1893 Punica granatum HOM05D001544 ORTHO05D005712 4.5e-29 131.7 147 46.9
SGA_v2.0_scaffold51G18782 Striga asiatica HOM05D001544 ORTHO05D005712 5.9e-29 131.3 147 44.9
Oeu021945.1 Olea europaea HOM05D001544 ORTHO05D005712 1.0e-28 130.6 151 46.4
Rhsim10G0214300 Rhododendron simsii HOM05D001544 ORTHO05D005712 1.7e-28 129.8 151 49.0
FAN20G3124 Fragaria x ananassa HOM05D001544 ORTHO05D005712 3.8e-28 128.6 154 46.8
CSS0013177 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 6.5e-28 127.9 146 50.0
QL06p034007 Quercus lobata HOM05D001544 ORTHO05D005712 8.5e-28 127.5 153 42.5
Lsat_1_v5_gn_2_78361 Lactuca sativa HOM05D001544 ORTHO05D005712 1.5e-27 126.7 149 45.6
HanXRQChr13g0414781 Helianthus annuus HOM05D001544 ORTHO05D005712 7.2e-27 124.4 147 44.9
SEGI_21342 Sequoiadendron giganteum HOM05D001544 ORTHO05D005712 1.2e-26 123.6 150 44.7
THA.LOC104821318 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 2.1e-26 122.9 151 45.0
Carub.0005s1750 Capsella rubella HOM05D001544 ORTHO05D005712 3.6e-26 122.1 152 46.7
FAN24G0484 Fragaria x ananassa HOM05D001544 ORTHO05D005712 3.6e-26 122.1 175 41.7
PGSC0003DMG402003620 Solanum tuberosum HOM05D001544 ORTHO05D005712 3.6e-26 122.1 146 45.9
MSTRG.23282 Avicennia marina HOM05D001544 ORTHO05D005712 4.7e-26 121.7 149 45.6
Migut.L00036 Erythranthe guttata HOM05D001544 ORTHO05D005712 6.1e-26 121.3 148 41.2
AT3G51100 Arabidopsis thaliana HOM05D001544 ORTHO05D005712 8.0e-26 120.9 157 43.9
SalBow8G0407 Salvia bowleyana HOM05D001544 ORTHO05D005712 8.0e-26 120.9 154 40.9
Sopen02g029220 Solanum pennellii HOM05D001544 ORTHO05D005712 1.0e-25 120.6 146 45.2
Manes.01G142600 Manihot esculenta HOM05D001544 ORTHO05D005712 1.4e-25 120.2 151 48.3
Manes.02G100900 Manihot esculenta HOM05D001544 ORTHO05D005712 1.4e-25 120.2 152 44.1
PSO675G4981 Papaver somniferum HOM05D001544 ORTHO05D005712 1.8e-25 119.8 175 39.4
Cfa006938 Carpinus fangiana HOM05D001544 ORTHO05D005712 2.3e-25 119.4 140 44.3
Migut.H02483 Erythranthe guttata HOM05D001544 ORTHO05D005712 2.3e-25 119.4 148 43.2
Solyc02g084550.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 4.0e-25 118.6 146 44.5
Oeu037732.1 Olea europaea HOM05D001544 ORTHO05D005712 5.2e-25 118.2 138 47.8
PSO210G7387 Papaver somniferum HOM05D001544 ORTHO05D005712 6.8e-25 117.9 150 43.3
Sp5g11110 Schrenkiella parvula HOM05D001544 ORTHO05D005712 8.8e-25 117.5 162 42.0
CARHR160690 Cardamine hirsuta HOM05D001544 ORTHO05D005712 1.2e-24 117.1 155 41.9
AL5G31520 Arabidopsis lyrata HOM05D001544 ORTHO05D005712 2.6e-24 115.9 158 42.4
ECA238G2610 Erigeron canadensis HOM05D002906 ORTHO05D003211 2.6e-24 115.9 138 42.8
Potri.005G117400 Populus trichocarpa HOM05D001544 ORTHO05D005712 2.6e-24 115.9 159 42.8
Potri.007G016200 Populus trichocarpa HOM05D001544 ORTHO05D005712 3.4e-24 115.5 158 43.7
BcaC06g33056 Brassica carinata HOM05D001544 ORTHO05D005712 7.5e-24 114.4 163 40.5
C07p46160 Brassica napus HOM05D001544 ORTHO05D005712 7.5e-24 114.4 163 40.5
BolC7t45132H Brassica oleracea HOM05D001544 ORTHO05D005712 7.5e-24 114.4 163 40.5
A03p48120 Brassica napus HOM05D001544 ORTHO05D005712 9.8e-24 114.0 163 40.5
BraA03t13919Z Brassica rapa HOM05D001544 ORTHO05D005712 9.8e-24 114.0 163 40.5
PSO541G2534 Papaver somniferum HOM05D001544 ORTHO05D005712 9.8e-24 114.0 175 38.3
Peaxi162Scf00010g00610 Petunia axillaris HOM05D001544 ORTHO05D005712 9.8e-24 114.0 144 45.8
CiPaw.07G055800 Carya illinoinensis HOM05D001544 ORTHO05D005712 1.3e-23 113.6 139 42.4
Aa31LG4G19200 Aethionema arabicum HOM05D001544 ORTHO05D005712 2.8e-23 112.5 156 39.7
CSS0007563 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 8.3e-23 110.9 126 46.8
Cc07_g10380 Coffea canephora HOM05D001544 ORTHO05D005712 1.1e-22 110.5 107 52.3
Os06g0713900 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 1.1e-22 110.5 147 40.1
DCAR_025988 Daucus carota HOM05D001544 ORTHO05D005712 1.8e-22 109.8 144 40.3
Thhalv10010713m.g Eutrema salsugineum HOM05D001544 ORTHO05D005712 1.8e-22 109.8 158 41.1
TAR381G0232 Trochodendron aralioides HOM05D001544 ORTHO05D005712 1.2e-21 107.1 104 51.0
vmacro21904 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 2.0e-21 106.3 107 51.4
RcHm_v2.0_Chr2g0099951 Rosa chinensis HOM05D001544 ORTHO05D005712 2.7e-21 105.9 150 42.7
Rhsim08G0035500 Rhododendron simsii HOM05D001544 ORTHO05D005712 3.5e-21 105.5 153 41.2
arahy.Tifrunner.gnm1.ann1.N6BS4T Arachis hypogaea HOM05D001544 ORTHO05D005712 4.5e-21 105.1 61 77.0
vmacro22095 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 3.8e-20 102.1 170 38.8
Dinv23461 Davidia involucrata HOM05D001544 ORTHO05D005712 5.0e-20 101.7 83 56.6
Prupe.7G164800 Prunus persica HOM05D001544 ORTHO05D005712 8.6e-20 100.9 142 40.1
unitig_0.g2167 Utricularia gibba HOM05D001544 ORTHO05D005712 1.1e-19 100.5 147 37.4
MD02G1135800 Malus domestica HOM05D001544 ORTHO05D005712 3.3e-19 99.0 149 39.6
MD15G1249400 Malus domestica HOM05D001544 ORTHO05D005712 4.2e-19 98.6 150 39.3
Haze_03811 Corylus avellana HOM05D001544 ORTHO05D005712 1.6e-18 96.7 187 35.8
Zm00001eb103400 Zea mays HOM05D001544 ORTHO05D005712 2.8e-18 95.9 172 35.5
THA.LOC104826761 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 4.7e-18 95.1 142 37.3
EL10As8g23856 Beta vulgaris HOM05D001544 ORTHO05D005712 2.3e-17 92.8 250 30.8
Thecc.01G023500 Theobroma cacao HOM05D001544 ORTHO05D005712 4.0e-17 92.0 137 36.5
Zm00001eb227920 Zea mays HOM05D001544 ORTHO05D005712 5.2e-17 91.7 143 39.9
Sabra05G0096400 Salix brachista HOM05D001544 ORTHO05D005712 2.0e-16 89.7 143 37.1
HPP92_022282 Vanilla planifolia HOM05D001544 ORTHO05D005712 2.6e-16 89.4 115 38.3
Lj4A214G24 Lonicera japonica HOM05D001544 ORTHO05D005712 5.7e-16 88.2 80 53.8
Zm00001eb319500 Zea mays HOM05D001544 ORTHO05D005712 7.5e-16 87.8 135 37.8
Thecc.01G023700 Theobroma cacao HOM05D001544 ORTHO05D005712 9.8e-16 87.4 144 34.7
Sabra07G0013400 Salix brachista HOM05D001544 ORTHO05D005712 3.7e-15 85.5 148 37.2
Mapoly0074s0044 Marchantia polymorpha HOM05D001544 ORTHO05D005712 3.1e-14 82.4 149 38.3
Dinv33599 Davidia involucrata HOM05D001544 ORTHO05D005712 7.0e-14 81.3 59 59.3
CARHR160680 Cardamine hirsuta HOM05D001544 ORTHO05D005712 7.8e-13 77.8 158 36.1
PSO675G0307 Papaver somniferum HOM05D001544 ORTHO05D005712 1.7e-12 76.6 121 38.8
MBI14_g19731_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 2.3e-12 76.3 148 35.1
PSO170G3698 Papaver somniferum HOM05D001544 ORTHO05D005712 1.9e-11 73.2 86 39.5
Dinv42006 Davidia involucrata HOM05D001544 ORTHO05D002732 3.3e-11 72.4 140 32.9
SMO361G0705 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 5.6e-11 71.6 145 35.2
FAN23G1654 Fragaria x ananassa HOM05D002906 ORTHO05D003211 8.0e-10 67.8 134 38.1
FAN26G2191 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.3e-09 66.2 134 37.3
FAN28G0278 Fragaria x ananassa HOM05D001544 ORTHO05D005712 3.1e-09 65.9 134 37.3
Os09g0530700 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 1.5e-08 63.5 60 48.3
MBI14_g19737_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 2.0e-08 63.2 47 53.2
FvH4_1g12190 Fragaria vesca HOM05D001544 ORTHO05D005712 3.4e-08 62.4 96 39.6
Gohir.D11G185900 Gossypium hirsutum HOM05D001544 ORTHO05D005712 7.5e-08 61.2 144 26.4
Gohir.A11G178100 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.3e-07 60.5 144 25.0
Gorai.007G197500 Gossypium raimondii HOM05D001544 ORTHO05D005712 2.9e-07 59.3 145 25.5
Pp3c3_3130 Physcomitrium patens HOM05D001544 ORTHO05D005712 1.9e-06 56.6 145 28.3
Actinidia23006 Actinidia chinensis HOM05D001544 ORTHO05D005712 2.4e-06 56.2 64 50.0
CDE12G0819 Ceratophyllum demersum HOM05D001544 ORTHO05D002732 2.4e-06 56.2 118 34.7


User provided reference genes

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