Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 1.8e-93 345.9 171 100.0
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 7.5e-68 260.8 151 83.4
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 1.3e-67 260.0 151 84.1
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 4.9e-67 258.1 151 84.1
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 2.4e-66 255.8 151 83.4
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 9.2e-66 253.8 146 84.9
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 1.2e-65 253.4 144 84.7
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 2.7e-65 252.3 146 84.2
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 7.8e-65 250.8 151 82.8
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 3.9e-64 248.4 144 81.9
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 2.1e-57 226.1 160 70.6
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 8.6e-56 220.7 148 71.6
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 4.3e-55 218.4 144 72.9
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.8e-53 213.0 145 71.0
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 6.8e-53 211.1 151 66.9
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 6.8e-53 211.1 145 71.0
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 2.0e-52 209.5 145 72.4
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.6e-52 209.1 144 67.4
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.4e-52 208.8 144 69.4
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.4e-52 208.4 144 67.4
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.8e-52 208.0 144 67.4
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 7.6e-52 207.6 144 68.8
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 9.9e-52 207.2 145 69.0
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.3e-51 206.8 144 66.7
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 1.7e-51 206.5 144 66.0
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 3.7e-51 205.3 148 65.5
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.9e-51 204.9 144 66.7
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.3e-51 204.1 144 66.7
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.1e-50 203.8 144 67.4
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 1.9e-50 203.0 146 65.1
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 3.2e-50 202.2 145 66.9
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 5.4e-50 201.4 147 70.1
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 5.4e-50 201.4 144 66.7
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 5.4e-50 201.4 146 66.4
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 5.4e-50 201.4 144 70.8
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 9.2e-50 200.7 144 70.8
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.6e-49 199.9 145 66.2
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.6e-49 199.9 145 66.2
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.1e-49 199.5 148 66.2
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.1e-49 199.5 144 68.1
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 2.7e-49 199.1 144 66.7
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 4.6e-49 198.4 152 64.5
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 7.8e-49 197.6 144 65.3
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.0e-48 197.2 144 66.7
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.7e-48 196.4 144 66.7
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 3.0e-48 195.7 144 64.6
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 3.0e-48 195.7 144 63.9
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 3.9e-48 195.3 145 65.5
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 3.9e-48 195.3 145 63.4
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 5.1e-48 194.9 144 66.7
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 5.1e-48 194.9 144 66.7
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 6.6e-48 194.5 145 65.5
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 6.6e-48 194.5 145 64.8
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 6.6e-48 194.5 158 64.6
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 6.6e-48 194.5 144 64.6
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 6.6e-48 194.5 144 62.5
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 8.6e-48 194.1 145 64.8
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 8.6e-48 194.1 145 64.8
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 1.5e-47 193.4 145 64.8
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.5e-47 193.4 148 65.5
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 1.9e-47 193.0 145 64.8
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.9e-47 193.0 148 65.5
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 2.5e-47 192.6 151 63.6
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 4.3e-47 191.8 155 62.6
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 5.6e-47 191.4 145 64.1
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 5.6e-47 191.4 149 64.4
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 1.2e-46 190.3 154 65.6
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 1.2e-46 190.3 145 63.4
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 2.1e-46 189.5 145 64.1
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 3.6e-46 188.7 144 61.8
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 3.6e-46 188.7 152 63.2
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 6.2e-46 188.0 144 63.9
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 1.4e-45 186.8 145 63.4
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 1.4e-45 186.8 145 61.4
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 2.4e-45 186.0 145 62.1
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.1e-45 185.7 144 63.2
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 3.1e-45 185.7 145 62.8
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 1.2e-44 183.7 154 59.1
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.2e-44 183.7 145 63.4
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 1.2e-44 183.7 145 63.4
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 3.4e-44 182.2 145 62.8
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 4.4e-44 181.8 145 62.8
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 4.4e-44 181.8 144 62.5
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 7.6e-44 181.0 144 62.5
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.7e-43 179.9 152 58.6
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 3.8e-43 178.7 145 59.3
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.9e-43 178.3 144 61.1
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 8.4e-43 177.6 144 61.1
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 7.1e-42 174.5 144 61.1
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 6.0e-41 171.4 144 59.0
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 6.0e-41 171.4 144 59.0
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 7.8e-41 171.0 109 72.5
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 6.6e-40 167.9 148 57.4
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 4.3e-39 165.2 144 56.2
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.3e-38 163.7 147 52.4
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 2.8e-38 162.5 152 52.6
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 4.8e-38 161.8 144 54.2
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.1e-37 160.6 148 54.7
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.3e-35 153.7 112 67.0
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.7e-35 153.3 153 51.6
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 7.1e-34 147.9 121 63.6
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 7.8e-33 144.4 132 54.5
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.3e-30 137.1 120 55.8
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.5e-28 130.2 131 49.6
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 4.3e-23 112.1 76 69.7
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 9.6e-23 110.9 112 50.9
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.8e-21 106.7 127 49.6
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 4.5e-20 102.1 113 40.7
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 4.5e-20 102.1 76 63.2
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 8.4e-19 97.8 77 64.9
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 7.1e-18 94.7 69 60.9
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 6.0e-17 91.7 97 50.5
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 6.7e-16 88.2 116 44.0
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 3.3e-15 85.9 84 58.3
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 9.6e-15 84.3 169 31.4
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 3.1e-13 79.3 81 53.1
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 9.0e-13 77.8 98 49.0
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 2.6e-12 76.3 76 52.6
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 1.4e-10 70.5 86 44.2
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 1.1e-07 60.8 160 24.4
MCO03G108 Micromonas commoda HOM05D006270 ORTHO05D007755 2.8e-06 56.2 144 31.9
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 3.7e-06 55.8 98 36.7
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 6.3e-06 55.1 65 46.2
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 8.2e-06 54.7 78 30.8


User provided reference genes

Program Settings