Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19660_v3 Cicer arietinum L. HOM05D000649 ORTHO05D000513 6.8e-57 223.8 114 100.0
Medtr4g035310 Medicago truncatula HOM05D000649 ORTHO05D000513 3.2e-46 188.3 112 88.4
Psat7g152240 Pisum sativum HOM05D000649 ORTHO05D000513 3.6e-42 174.9 106 84.9
Phvul.011G003400 Phaseolus vulgaris HOM05D000649 ORTHO05D000513 1.5e-35 152.9 115 77.4
Atru.chr13.2590 Acer truncatum HOM05D000649 ORTHO05D000513 1.2e-32 143.3 114 70.2
CiPaw.03G012200 Carya illinoinensis HOM05D000649 ORTHO05D000513 2.2e-31 139.0 113 68.1
Lj3g0017808 Lotus japonicus HOM05D000649 ORTHO05D000513 2.9e-31 138.7 113 70.8
CiPaw.04G008500 Carya illinoinensis HOM05D000649 ORTHO05D000513 3.8e-31 138.3 111 68.5
arahy.Tifrunner.gnm1.ann1.27MXSE Arachis hypogaea HOM05D000649 ORTHO05D000513 4.9e-31 137.9 123 69.9
QL09p001186 Quercus lobata HOM05D000649 ORTHO05D000513 6.4e-31 137.5 99 72.7
Thecc.08G165500 Theobroma cacao HOM05D000649 ORTHO05D000513 6.4e-31 137.5 112 67.9
GSVIVG01037134001 Vitis vinifera HOM05D000649 ORTHO05D000513 8.4e-31 137.1 106 71.7
Duzib116G0040 Durio zibethinus HOM05D000649 ORTHO05D000513 1.1e-30 136.7 112 67.0
Glyma.12G002800 Glycine max HOM05D000649 ORTHO05D000513 1.4e-30 136.3 112 75.0
VMungo1127G0524 Vigna mungo HOM05D000649 ORTHO05D000513 1.4e-30 136.3 109 74.3
Glyma.09G234200 Glycine max HOM05D000649 ORTHO05D000513 4.1e-30 134.8 113 71.7
Duzib177G1019 Durio zibethinus HOM05D000649 ORTHO05D000513 6.0e-29 131.0 110 66.4
Sabra13G0080800 Salix brachista HOM05D000649 ORTHO05D000513 3.0e-28 128.6 115 69.6
Sabra19G0081900 Salix brachista HOM05D000649 ORTHO05D000513 1.2e-26 123.2 113 65.5
Manes.05G123400 Manihot esculenta HOM05D000649 ORTHO05D000513 8.1e-26 120.6 105 64.8
arahy.Tifrunner.gnm1.ann1.94A4PA Arachis hypogaea HOM05D000649 ORTHO05D000513 1.1e-25 120.2 122 63.1
DCAR_001181 Daucus carota HOM05D000649 ORTHO05D000513 5.2e-25 117.9 115 58.3
Cfa008035 Carpinus fangiana HOM05D000649 ORTHO05D000513 8.9e-25 117.1 109 66.1
Peaxi162Scf00078g01146 Petunia axillaris HOM05D000649 ORTHO05D000513 1.2e-24 116.7 101 65.3
Potri.013G094400 Populus trichocarpa HOM05D000649 ORTHO05D000513 1.2e-24 116.7 107 65.4
SalBow7G1929 Salvia bowleyana HOM05D000649 ORTHO05D000513 1.2e-24 116.7 112 58.9
Potri.019G068400 Populus trichocarpa HOM05D000649 ORTHO05D000513 1.5e-24 116.3 106 63.2
Gohir.A03G080800 Gossypium hirsutum HOM05D000649 ORTHO05D000513 2.0e-24 115.9 112 58.9
Gohir.D02G103600 Gossypium hirsutum HOM05D000649 ORTHO05D000513 2.0e-24 115.9 112 58.9
Gorai.005G117700 Gossypium raimondii HOM05D000649 ORTHO05D000513 2.0e-24 115.9 112 58.9
COL.COLO4_25055 Corchorus olitorius HOM05D000649 ORTHO05D000513 3.4e-24 115.2 113 61.1
Oeu028618.1 Olea europaea HOM05D000649 ORTHO05D000513 1.3e-23 113.2 105 60.0
TWI12G0184 Tripterygium wilfordii HOM05D000649 ORTHO05D000513 2.2e-23 112.5 123 62.6
Actinidia23300 Actinidia chinensis HOM05D000649 ORTHO05D000513 6.4e-23 110.9 115 59.1
DCAR_010115 Daucus carota HOM05D000320 ORTHO05D000513 4.2e-22 108.2 101 59.4
CSS0040374 Camellia sinensis var. sinensis HOM05D000649 ORTHO05D000513 5.4e-22 107.8 130 54.6
Nitab4.5_0007117g0010 Nicotiana tabacum HOM05D000649 ORTHO05D000513 5.4e-22 107.8 105 61.9
Cpa.g.sc249.12 Carica papaya HOM05D000649 ORTHO05D000513 9.3e-22 107.1 123 59.3
Nitab4.5_0000079g0090 Nicotiana tabacum HOM05D000649 ORTHO05D000513 1.6e-21 106.3 105 61.0
TWI75G0301 Tripterygium wilfordii HOM05D000649 ORTHO05D000513 1.6e-21 106.3 123 61.8
Prupe.8G001400 Prunus persica HOM05D000649 ORTHO05D000513 2.7e-21 105.5 125 56.8
Haze_14009 Corylus avellana HOM05D000649 ORTHO05D000513 4.6e-21 104.8 102 59.8
Eucgr.F04089 Eucalyptus grandis HOM05D000649 ORTHO05D000513 7.8e-21 104.0 107 58.9
MD05G1000700 Malus domestica HOM05D000649 ORTHO05D000513 1.1e-19 100.1 136 52.2
Hma1.2p1_0016F.1_g011020 Hydrangea macrophylla HOM05D000649 ORTHO05D000513 2.5e-19 99.0 108 55.6
Sed0021359 Sechium edule HOM05D000649 ORTHO05D000513 3.3e-19 98.6 119 55.5
DCAR_014055 Daucus carota HOM05D000649 ORTHO05D000513 1.3e-18 96.7 113 51.3
Migut.C01403 Erythranthe guttata HOM05D000649 ORTHO05D000513 2.1e-18 95.9 112 55.4
Gohir.A08G229300 Gossypium hirsutum HOM05D000649 ORTHO05D000513 8.1e-18 94.0 96 56.2
TAR628G0863 Trochodendron aralioides HOM05D000649 ORTHO05D000513 8.1e-18 94.0 113 53.1
Gohir.D08G249600 Gossypium hirsutum HOM05D000649 ORTHO05D000513 1.1e-17 93.6 96 56.2
Gorai.004G266200 Gossypium raimondii HOM05D000649 ORTHO05D000513 1.1e-17 93.6 96 56.2
unitig_578.g16112 Utricularia gibba HOM05D000649 ORTHO05D000513 3.1e-17 92.0 107 53.3
Nn5g27202 Nelumbo nucifera HOM05D000649 ORTHO05D000513 4.0e-17 91.7 99 55.6
Lj9A695T53 Lonicera japonica HOM05D000649 ORTHO05D000513 5.3e-17 91.3 131 48.1
FvH4_2g00160 Fragaria vesca HOM05D000649 ORTHO05D000513 7.6e-16 87.4 114 57.0
FAN20G3123 Fragaria x ananassa HOM05D000649 ORTHO05D000513 7.6e-16 87.4 114 57.0
FAN24G3476 Fragaria x ananassa HOM05D000649 ORTHO05D000513 7.6e-16 87.4 114 57.0
Lalb_Chr01g0000161 Lupinus albus HOM05D000649 ORTHO05D000513 9.9e-16 87.0 114 53.5
AL1G47850 Arabidopsis lyrata HOM05D000649 ORTHO05D000513 1.7e-15 86.3 107 50.5
Dinv37398 Davidia involucrata HOM05D000649 ORTHO05D000513 1.7e-15 86.3 111 49.5
ECA247G3339 Erigeron canadensis HOM05D000649 ORTHO05D000513 1.7e-15 86.3 118 48.3
Lsat_1_v5_gn_1_24581 Lactuca sativa HOM05D000649 ORTHO05D000513 1.7e-15 86.3 114 48.2
Zm00001eb145950 Zea mays HOM05D000649 ORTHO05D000513 1.7e-15 86.3 106 49.1
Thhalv10008315m.g Eutrema salsugineum HOM05D000649 ORTHO05D000513 2.2e-15 85.9 107 49.5
PGSC0003DMG400003484 Solanum tuberosum HOM05D000649 ORTHO05D000513 2.2e-15 85.9 111 50.5
THA.LOC104815766 Tarenaya hassleriana HOM05D000649 ORTHO05D000513 2.2e-15 85.9 107 50.5
HanXRQChr12g0369231 Helianthus annuus HOM05D000649 ORTHO05D000513 3.8e-15 85.1 109 52.3
AT1G33470 Arabidopsis thaliana HOM05D000649 ORTHO05D000513 4.9e-15 84.7 107 50.5
Aa31LG6G7940 Aethionema arabicum HOM05D000649 ORTHO05D000513 6.4e-15 84.3 107 47.7
Lalb_Chr19g0140441 Lupinus albus HOM05D000649 ORTHO05D000513 6.4e-15 84.3 118 51.7
Sopen11g020040 Solanum pennellii HOM05D000649 ORTHO05D000513 6.4e-15 84.3 114 50.0
BcaC05g27803 Brassica carinata HOM05D000649 ORTHO05D000513 1.9e-14 82.8 105 48.6
Rhsim12G0001700 Rhododendron simsii HOM05D000649 ORTHO05D000513 1.9e-14 82.8 125 51.2
TAR381G1214 Trochodendron aralioides HOM05D000649 ORTHO05D000513 1.9e-14 82.8 104 52.9
Sp1g28910 Schrenkiella parvula HOM05D000649 ORTHO05D000513 2.4e-14 82.4 107 47.7
C05p38020 Brassica napus HOM05D000649 ORTHO05D000513 3.2e-14 82.0 99 49.5
Carub.0001s3165 Capsella rubella HOM05D000649 ORTHO05D000513 3.2e-14 82.0 107 47.7
CARHR032900 Cardamine hirsuta HOM05D000649 ORTHO05D000513 3.2e-14 82.0 107 47.7
Os01g0876800 Oryza sativa ssp. japonica HOM05D000649 ORTHO05D000513 4.2e-14 81.6 107 47.7
RcHm_v2.0_Chr6g0249431 Rosa chinensis HOM05D000649 ORTHO05D000513 4.2e-14 81.6 114 55.3
A05p24270 Brassica napus HOM05D000649 ORTHO05D000513 5.4e-14 81.3 100 49.0
BraA05t21319Z Brassica rapa HOM05D000649 ORTHO05D000513 5.4e-14 81.3 100 49.0
MD00G1161300 Malus domestica HOM05D000649 ORTHO05D000513 9.3e-14 80.5 121 49.6
Zm00001eb366360 Zea mays HOM05D000649 ORTHO05D000513 1.2e-13 80.1 106 48.1
HanXRQChr04g0102501 Helianthus annuus HOM05D000649 ORTHO05D000513 4.6e-13 78.2 111 50.5
BcaB03g13698 Brassica carinata HOM05D000649 ORTHO05D000513 6.0e-13 77.8 105 46.7
Cc10_g16160 Coffea canephora HOM05D000649 ORTHO05D000513 1.0e-12 77.0 125 48.8
PGR102G1365 Punica granatum HOM05D000649 ORTHO05D000513 1.0e-12 77.0 130 45.4
vmacro00955 Vaccinium macrocarpon HOM05D000649 ORTHO05D000513 1.3e-12 76.6 123 48.0
MSTRG.25505 Avicennia marina HOM05D000649 ORTHO05D000513 5.1e-12 74.7 114 49.1
Ciclev10021520m.g Citrus clementina HOM05D000649 ORTHO05D000513 6.7e-12 74.3 116 49.1
BolC5t32533H Brassica oleracea HOM05D000649 ORTHO05D000513 1.9e-11 72.8 106 43.4
Solyc11g044470.3 Solanum lycopersicum HOM05D000649 ORTHO05D000513 2.5e-11 72.4 110 45.5
MBI03_g05193_MAGBIO Magnolia biondii HOM05D000649 ORTHO05D000513 3.3e-11 72.0 104 50.0
ClCG08G001810 Citrullus lanatus HOM05D000649 ORTHO05D000513 7.4e-11 70.9 116 48.3
Dinv22061 Davidia involucrata HOM05D000649 ORTHO05D000513 4.0e-09 65.1 124 41.9
MBI06_g32145_MAGBIO Magnolia biondii HOM05D000649 ORTHO05D000513 2.2e-07 59.3 108 39.8
TAR376G1146 Trochodendron aralioides HOM05D000649 ORTHO05D000513 6.4e-07 57.8 110 42.7
EL10Ac1g01290 Beta vulgaris HOM05D000649 ORTHO05D000513 1.9e-06 56.2 116 40.5
MELO3C022120.2 Cucumis melo HOM05D000649 ORTHO05D000513 2.4e-06 55.8 110 43.6
CsaV3_5G039420 Cucumis sativus L. HOM05D000649 ORTHO05D000513 2.4e-06 55.8 110 43.6
Aqoxy6G00037 Aquilegia oxysepala HOM05D000649 ORTHO05D000513 5.5e-06 54.7 64 45.3


User provided reference genes

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