Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19642_v3 Cicer arietinum L. HOM05D005822 ORTHO05D007267 1.3e-154 549.7 271 100.0
TPR.G20240 Trifolium pratense HOM05D005822 ORTHO05D007267 4.3e-118 428.3 240 87.9
Psat7g157640 Pisum sativum HOM05D005822 ORTHO05D007267 1.6e-109 399.8 244 84.0
Medtr2g060420 Medicago truncatula HOM05D005822 ORTHO05D007267 3.1e-108 395.6 244 83.6
Glyma.12G012400 Glycine max HOM05D005822 ORTHO05D007267 2.0e-107 392.9 245 81.2
Lj3g0012047 Lotus japonicus HOM05D005822 ORTHO05D007267 1.3e-106 390.2 244 81.6
VMungo1127G1665 Vigna mungo HOM05D005822 ORTHO05D007267 6.5e-106 387.9 246 79.7
Phvul.011G015300 Phaseolus vulgaris HOM05D005822 ORTHO05D007267 1.0e-103 380.6 242 79.8
Glyma.09G224600 Glycine max HOM05D005822 ORTHO05D007267 9.7e-102 374.0 246 78.0
Lalb_Chr06g0161881 Lupinus albus HOM05D005822 ORTHO05D007267 1.3e-98 363.6 252 76.2
arahy.Tifrunner.gnm1.ann1.47454T Arachis hypogaea HOM05D005822 ORTHO05D007267 8.8e-95 350.9 248 74.2
Ciclev10004670m.g Citrus clementina HOM05D005822 ORTHO05D007267 1.3e-93 347.1 250 67.6
Manes.02G134200 Manihot esculenta HOM05D005822 ORTHO05D007267 5.3e-92 341.7 258 66.7
Sabra03G0075200 Salix brachista HOM05D005822 ORTHO05D007267 1.3e-90 337.0 279 63.1
Potri.001G124900 Populus trichocarpa HOM05D005822 ORTHO05D007267 1.7e-90 336.7 255 67.8
FvH4_7g27380 Fragaria vesca HOM05D005822 ORTHO05D007267 2.9e-90 335.9 251 68.1
Gorai.008G215800 Gossypium raimondii HOM05D005822 ORTHO05D007267 1.9e-89 333.2 260 66.2
RcHm_v2.0_Chr1g0374211 Rosa chinensis HOM05D005822 ORTHO05D007267 1.9e-89 333.2 254 68.1
Duzib205G0525 Durio zibethinus HOM05D005822 ORTHO05D007267 3.2e-89 332.4 260 65.0
Prupe.2G276500 Prunus persica HOM05D005822 ORTHO05D007267 3.6e-88 328.9 261 64.4
Thecc.03G154900 Theobroma cacao HOM05D005822 ORTHO05D007267 3.6e-88 328.9 260 64.6
FAN06G4841 Fragaria x ananassa HOM05D005822 ORTHO05D007267 7.9e-88 327.8 251 66.5
Cpa.g.sc3.330 Carica papaya HOM05D005822 ORTHO05D007267 5.1e-87 325.1 258 64.3
FAN06G5026 Fragaria x ananassa HOM05D005822 ORTHO05D007267 6.7e-87 324.7 251 66.1
Eucgr.A02894 Eucalyptus grandis HOM05D005822 ORTHO05D007267 8.8e-87 324.3 263 65.0
CANSAT56G1500 Cannabis sativa HOM05D005822 ORTHO05D007267 1.5e-86 323.6 261 64.0
Gohir.D12G200700 Gossypium hirsutum HOM05D005822 ORTHO05D007267 2.0e-86 323.2 260 64.6
Gohir.A12G198100 Gossypium hirsutum HOM05D005822 ORTHO05D007267 3.3e-86 322.4 260 64.6
TWI14G0278 Tripterygium wilfordii HOM05D005822 ORTHO05D007267 7.4e-86 321.2 254 65.4
PGR042G1636 Punica granatum HOM05D005822 ORTHO05D007267 3.7e-85 318.9 254 66.1
ClCG01G004960 Citrullus lanatus HOM05D005822 ORTHO05D007267 6.3e-85 318.2 249 67.9
MELO3C005439.2 Cucumis melo HOM05D005822 ORTHO05D007267 6.3e-85 318.2 249 68.3
CsaV3_5G005200 Cucumis sativus L. HOM05D005822 ORTHO05D007267 8.2e-85 317.8 253 68.0
Atru.chr8.1041 Acer truncatum HOM05D005822 ORTHO05D007267 1.1e-84 317.4 253 65.6
Haze_13887 Corylus avellana HOM05D005822 ORTHO05D007267 9.1e-84 314.3 252 63.9
FAN03G1300 Fragaria x ananassa HOM05D005822 ORTHO05D007267 9.1e-84 314.3 251 64.9
MD07G1252900 Malus domestica HOM05D005822 ORTHO05D007267 1.5e-83 313.5 261 62.5
Cfa008156 Carpinus fangiana HOM05D005822 ORTHO05D007267 1.7e-82 310.1 252 63.1
CiPaw.04G059500 Carya illinoinensis HOM05D005822 ORTHO05D007267 2.2e-82 309.7 259 63.7
Ah.03g147280 Amaranthus hybridus HOM05D005822 ORTHO05D007267 3.8e-82 308.9 259 61.4
vmacro06808 Vaccinium macrocarpon HOM05D005822 ORTHO05D007267 3.8e-82 308.9 260 63.1
GSVIVG01018681001 Vitis vinifera HOM05D005822 ORTHO05D007267 6.5e-82 308.1 256 63.3
Dinv28582 Davidia involucrata HOM05D005822 ORTHO05D007267 8.5e-82 307.8 266 62.0
QL09p005687 Quercus lobata HOM05D005822 ORTHO05D007267 8.5e-82 307.8 244 66.0
Sed0004127 Sechium edule HOM05D005822 ORTHO05D007267 1.9e-81 306.6 244 65.6
DCAR_014621 Daucus carota HOM05D005822 ORTHO05D007267 1.6e-80 303.5 251 63.3
Oeu022478.1 Olea europaea HOM05D005822 ORTHO05D007267 4.7e-80 302.0 248 64.5
CSS0032435 Camellia sinensis var. sinensis HOM05D005822 ORTHO05D007267 8.8e-79 297.7 270 59.6
THA.LOC104819450 Tarenaya hassleriana HOM05D005822 ORTHO05D007267 9.7e-78 294.3 259 60.6
Migut.F00481 Erythranthe guttata HOM05D005822 ORTHO05D007267 1.3e-77 293.9 253 58.9
CSS0049205 Camellia sinensis var. sinensis HOM05D005822 ORTHO05D007267 3.7e-77 292.4 270 58.5
Nn1g00973 Nelumbo nucifera HOM05D005822 ORTHO05D007267 3.7e-77 292.4 258 60.9
Sc19g0002050 Simmondsia chinensis HOM05D005822 ORTHO05D007267 3.7e-77 292.4 257 60.7
Nitab4.5_0002816g0040 Nicotiana tabacum HOM05D005822 ORTHO05D007267 2.4e-76 289.7 257 58.8
Actinidia13579 Actinidia chinensis HOM05D005822 ORTHO05D007267 3.1e-76 289.3 210 68.6
Solyc03g093240.4 Solanum lycopersicum HOM05D005822 ORTHO05D007267 5.3e-76 288.5 250 60.0
Cc02_g04350 Coffea canephora HOM05D005822 ORTHO05D007267 9.1e-76 287.7 202 69.3
ATR0317G089 Amborella trichopoda HOM05D005822 ORTHO05D007267 1.2e-75 287.3 238 61.8
Nitab4.5_0003490g0080 Nicotiana tabacum HOM05D005822 ORTHO05D007267 2.6e-75 286.2 257 58.0
Aa31LG4G16250 Aethionema arabicum HOM05D005822 ORTHO05D007267 4.5e-75 285.4 259 57.1
Hund04595 Selenicereus undatus HOM05D005822 ORTHO05D007267 4.5e-75 285.4 187 73.3
TAR629G1836 Trochodendron aralioides HOM05D005822 ORTHO05D007267 4.5e-75 285.4 255 60.4
BcaC01g01823 Brassica carinata HOM05D005822 ORTHO05D007267 7.7e-75 284.6 255 58.4
PSO063G1588 Papaver somniferum HOM05D005822 ORTHO05D007267 2.2e-74 283.1 199 69.3
Sopen03g024040 Solanum pennellii HOM05D005822 ORTHO05D007267 2.2e-74 283.1 250 58.4
EL10Ac3g05850 Beta vulgaris HOM05D005822 ORTHO05D007267 2.9e-74 282.7 205 68.3
PSO782G2939 Papaver somniferum HOM05D005822 ORTHO05D007267 3.8e-74 282.3 199 68.8
BcaB01g00923 Brassica carinata HOM05D005822 ORTHO05D007267 5.0e-74 282.0 251 57.8
BraA06t25104Z Brassica rapa HOM05D005822 ORTHO05D007267 8.5e-74 281.2 255 57.6
Zm00001eb209870 Zea mays HOM05D005822 ORTHO05D007267 8.5e-74 281.2 203 66.0
CARHR156090 Cardamine hirsuta HOM05D005822 ORTHO05D007267 1.1e-73 280.8 254 58.7
C03p71590 Brassica napus HOM05D005822 ORTHO05D007267 1.5e-73 280.4 256 58.2
BolC3t19450H Brassica oleracea HOM05D005822 ORTHO05D007267 1.5e-73 280.4 256 58.2
Aqoxy5G03861 Aquilegia oxysepala HOM05D005822 ORTHO05D007267 4.2e-73 278.9 266 56.4
AT3G47450 Arabidopsis thaliana HOM05D005822 ORTHO05D007267 9.4e-73 277.7 255 57.6
Sp5g14430 Schrenkiella parvula HOM05D005822 ORTHO05D007267 1.2e-72 277.3 254 56.3
Thhalv10010252m.g Eutrema salsugineum HOM05D005822 ORTHO05D007267 1.6e-72 276.9 251 58.2
Carub.0005s1354 Capsella rubella HOM05D005822 ORTHO05D007267 2.7e-72 276.2 252 57.5
AL5G26670 Arabidopsis lyrata HOM05D005822 ORTHO05D007267 3.6e-72 275.8 254 57.1
MSTRG.8827 Avicennia marina HOM05D005822 ORTHO05D007267 4.7e-72 275.4 238 59.2
Lsat_1_v5_gn_9_52001 Lactuca sativa HOM05D005822 ORTHO05D007267 6.1e-72 275.0 273 56.4
A06p20210 Brassica napus HOM05D005822 ORTHO05D007267 1.8e-71 273.5 255 56.5
Os02g0104700 Oryza sativa ssp. japonica HOM05D005822 ORTHO05D007267 1.8e-71 273.5 202 66.3
unitig_52.g17763 Utricularia gibba HOM05D005822 ORTHO05D007267 2.3e-71 273.1 246 60.6
HanXRQChr16g0512801 Helianthus annuus HOM05D005822 ORTHO05D007267 8.8e-71 271.2 261 59.0
Peaxi162Scf00241g00035 Petunia axillaris HOM05D005822 ORTHO05D007267 5.7e-70 268.5 250 58.4
Lj1A979T81 Lonicera japonica HOM05D005822 ORTHO05D007267 7.5e-70 268.1 282 52.8
SGA_v2.0_scaffold44G16550 Striga asiatica HOM05D005822 ORTHO05D007267 6.3e-69 265.0 207 65.2
MBI12_g29751_MAGBIO Magnolia biondii HOM05D005822 ORTHO05D007267 3.1e-68 262.7 177 71.8
SalBow8G0561 Salvia bowleyana HOM05D005822 ORTHO05D007267 3.1e-68 262.7 255 54.9
ECA232G0361 Erigeron canadensis HOM05D005822 ORTHO05D007267 2.7e-67 259.6 204 63.7
AUR62002209 Chenopodium quinoa HOM05D005822 ORTHO05D007267 1.8e-63 246.9 197 63.5
AUR62015490 Chenopodium quinoa HOM05D005822 ORTHO05D007267 2.0e-62 243.4 197 62.9
Rhsim03G0166500 Rhododendron simsii HOM05D005822 ORTHO05D007267 1.3e-58 230.7 405 39.3
AagrBONN_evm.TU.Sc2ySwM_344.3689 Anthoceros agrestis HOM05D005822 ORTHO05D007267 3.8e-58 229.2 206 56.3
Mapoly0014s0202 Marchantia polymorpha HOM05D005822 ORTHO05D007267 7.5e-54 214.9 223 50.2
Pp3c7_23510 Physcomitrium patens HOM05D005822 ORTHO05D007267 1.3e-53 214.2 211 54.0
SMO367G0603 Selaginella moellendorffii HOM05D005822 ORTHO05D007267 1.7e-53 213.8 193 55.4
CDE04G0461 Ceratophyllum demersum HOM05D005822 ORTHO05D007267 1.6e-48 197.2 121 75.2
COL.COLO4_14109 Corchorus olitorius HOM05D005822 ORTHO05D007267 1.2e-40 171.0 96 83.3
HPP92_012738 Vanilla planifolia HOM05D005822 ORTHO05D007267 2.8e-40 169.9 99 79.8
SEGI_37390 Sequoiadendron giganteum HOM05D005822 ORTHO05D007267 8.3e-37 158.3 96 78.1
MCO07G059 Micromonas commoda HOM05D005822 ORTHO05D007267 7.8e-35 151.8 194 42.3
PRCOL_00004906 Prasinoderma coloniale HOM05D005822 ORTHO05D007267 6.8e-31 138.7 207 38.2
Actinidia21289 Actinidia chinensis HOM05D005822 ORTHO05D007267 8.3e-29 131.7 116 57.8
CBR_g47954 Chara braunii HOM05D005822 ORTHO05D007267 1.7e-26 124.0 108 54.6
VMungo0251G1366 Vigna mungo HOM05D005822 ORTHO05D007267 1.6e-24 117.5 121 52.9
FAN10G0261 Fragaria x ananassa HOM05D000009 ORTHO05D007267 2.8e-24 116.7 94 64.9
FvH4_7g27641 Fragaria vesca HOM05D005822 ORTHO05D007267 6.4e-21 105.5 66 75.8
Cre09.g400550 Chlamydomonas reinhardtii HOM05D005822 ORTHO05D007267 7.3e-17 92.0 307 26.1
CBR_g34812 Chara braunii HOM05D005822 ORTHO05D007267 3.1e-15 86.7 59 67.8
Haze_01716 Corylus avellana HOM05D005822 ORTHO05D028575 5.4e-12 75.9 76 50.0
Cfa008215 Carpinus fangiana HOM05D004506 ORTHO05D005894 1.2e-11 74.7 87 48.3
FvH4_7g27354 Fragaria vesca HOM05D005822 ORTHO05D007267 1.7e-10 70.9 46 69.6
Rhsim01G0186200 Rhododendron simsii HOM05D002613 ORTHO05D003140 9.9e-06 55.1 202 24.3


User provided reference genes

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