Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 0.0e+00 1519.2 806 100.0
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 3.6e-285 984.9 851 67.3
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 6.1e-277 957.6 873 64.1
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 2.2e-271 939.1 842 66.2
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 2.8e-229 799.3 857 58.1
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 8.6e-215 751.1 881 55.1
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 9.9e-211 737.6 869 55.0
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 5.1e-207 725.3 866 54.4
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 1.4e-193 680.6 820 52.1
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 4.6e-192 675.6 820 51.6
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 7.1e-185 651.7 870 50.8
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 7.6e-179 631.7 851 49.8
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 4.9e-125 453.0 855 39.1
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 1.7e-122 444.5 853 39.6
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 4.1e-108 396.7 872 37.8
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 7.1e-108 396.0 868 37.4
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 9.2e-108 395.6 873 36.3
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 2.1e-107 394.4 868 36.9
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 1.7e-106 391.3 862 36.2
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.7e-106 391.3 848 35.8
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 2.3e-106 391.0 852 37.4
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 2.5e-105 387.5 866 36.5
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 9.5e-105 385.6 860 36.4
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 2.8e-104 384.0 868 37.0
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 1.4e-100 371.7 836 37.8
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.4e-100 371.7 883 35.4
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 1.4e-100 371.7 870 35.7
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.9e-100 371.3 876 35.3
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 7.8e-99 365.9 841 35.8
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.7e-98 364.8 849 35.3
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.5e-97 361.7 786 39.6
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 1.1e-95 355.5 792 39.1
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 2.4e-95 354.4 877 35.2
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 4.4e-94 350.1 762 39.4
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 7.6e-94 349.4 840 38.3
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 1.4e-92 345.1 869 33.0
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 9.6e-89 332.4 835 35.1
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 9.9e-86 322.4 845 31.7
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 4.9e-85 320.1 850 34.1
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 1.1e-84 318.9 850 32.5
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 1.4e-84 318.5 854 32.1
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 1.4e-84 318.5 842 32.4
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.4e-84 318.5 600 39.3
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 5.4e-84 316.6 830 33.3
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 9.3e-84 315.8 922 32.5
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 9.3e-84 315.8 829 31.7
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 4.3e-81 307.0 648 37.0
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.8e-80 304.3 648 36.4
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 8.1e-80 302.8 798 33.8
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 2.4e-79 301.2 785 35.8
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 2.6e-78 297.7 834 33.1
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 2.6e-78 297.7 824 33.3
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 9.9e-78 295.8 835 31.4
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 9.9e-78 295.8 591 38.1
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 1.4e-76 292.0 886 31.9
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 2.4e-76 291.2 587 38.5
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 1.8e-74 285.0 571 36.4
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 7.6e-70 269.6 791 32.6
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 5.5e-68 263.5 581 36.5
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 1.2e-67 262.3 781 33.0
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.6e-67 261.9 802 32.4
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 1.6e-67 261.9 747 33.7
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 1.6e-67 261.9 747 33.7
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 3.9e-66 257.3 612 32.8
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.9e-65 255.0 522 35.1
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.5e-65 254.6 804 30.8
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 4.3e-65 253.8 633 32.9
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 9.6e-65 252.7 810 29.1
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 3.7e-64 250.8 814 32.1
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 6.3e-64 250.0 783 29.4
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 5.3e-63 246.9 831 31.9
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 5.3e-63 246.9 585 34.5
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 1.5e-62 245.4 930 28.6
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 2.6e-62 244.6 757 30.3
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 3.4e-62 244.2 877 30.4
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 5.9e-62 243.4 764 32.9
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 5.9e-62 243.4 830 31.0
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 1.7e-61 241.9 686 32.7
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 5.0e-61 240.4 794 31.1
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 6.5e-61 240.0 818 30.3
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 8.5e-61 239.6 669 33.9
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.5e-60 238.0 796 30.2
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 4.2e-60 237.3 776 30.9
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 5.5e-60 236.9 809 30.8
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 5.5e-60 236.9 436 36.7
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 7.2e-60 236.5 864 29.6
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 1.2e-59 235.7 809 30.9
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 1.2e-59 235.7 433 37.0
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 1.2e-59 235.7 730 31.0
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 7.4e-57 226.5 849 28.7
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 6.9e-55 219.9 616 31.5
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 2.6e-54 218.0 254 51.2
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 2.9e-53 214.5 420 38.3
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 6.5e-53 213.4 702 30.8
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 3.3e-49 201.1 642 31.8
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 6.7e-42 176.8 627 28.7
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 4.4e-41 174.1 491 31.2
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 9.7e-41 172.9 849 27.6
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 8.2e-40 169.9 646 28.5
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 1.4e-39 169.1 872 26.6
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 5.3e-39 167.2 626 30.4
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 7.7e-38 163.3 697 29.3
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.4e-34 152.5 778 27.0
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 5.2e-34 150.6 675 28.4
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.6e-33 148.3 157 51.0
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 8.5e-29 133.3 480 30.4
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 2.0e-25 122.1 594 28.5
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.3e-13 82.8 111 48.6
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 2.6e-09 68.6 215 30.7
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 7.5e-09 67.0 179 27.9
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 4.1e-07 61.2 126 33.3
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 3.5e-06 58.2 98 35.7
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 3.5e-06 58.2 98 35.7


User provided reference genes

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