Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 8.2e-157 557.0 277 100.0
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 2.0e-142 509.2 277 91.7
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 1.8e-140 502.7 279 91.4
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 4.1e-140 501.5 277 91.0
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 3.4e-134 481.9 277 87.4
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 6.6e-130 467.6 278 84.9
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 8.6e-130 467.2 277 84.1
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 3.0e-127 458.8 279 82.8
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 2.0e-126 456.1 279 82.1
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 1.7e-125 453.0 259 86.1
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 8.3e-125 450.7 277 81.6
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 1.4e-124 449.9 281 81.1
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 2.0e-123 446.0 276 80.1
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 4.6e-123 444.9 274 81.8
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 7.8e-123 444.1 273 80.2
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 7.8e-123 444.1 273 80.2
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 1.0e-122 443.7 277 81.2
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 2.3e-122 442.6 264 83.3
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 3.0e-122 442.2 273 79.9
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 3.9e-122 441.8 276 80.1
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 3.9e-122 441.8 257 85.2
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 6.6e-122 441.0 259 84.9
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.9e-121 439.5 273 79.1
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 2.5e-121 439.1 253 85.0
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 7.3e-121 437.6 259 83.8
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 2.1e-120 436.0 241 87.1
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 2.8e-120 435.6 279 78.9
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 4.7e-120 434.9 282 78.0
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 1.8e-119 433.0 280 77.9
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 1.8e-119 433.0 273 79.5
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 3.1e-119 432.2 279 77.8
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 4.4e-118 428.3 257 80.9
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 4.4e-118 428.3 267 80.5
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 4.4e-118 428.3 267 80.5
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 4.4e-118 428.3 275 78.2
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 9.8e-118 427.2 270 79.6
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 9.8e-118 427.2 270 79.6
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 9.8e-118 427.2 240 86.2
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 1.3e-117 426.8 276 77.5
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 1.7e-117 426.4 254 82.3
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 2.2e-117 426.0 260 80.8
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 2.2e-117 426.0 240 85.4
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 3.7e-117 425.2 274 77.0
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 3.7e-117 425.2 241 85.1
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 1.1e-116 423.7 264 79.2
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 1.1e-116 423.7 281 73.7
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 1.1e-116 423.7 277 76.2
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 4.1e-116 421.8 273 78.4
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 7.0e-116 421.0 276 76.4
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 7.0e-116 421.0 281 73.3
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 7.0e-116 421.0 243 84.4
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 7.0e-116 421.0 245 84.1
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 1.6e-115 419.9 278 75.5
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 2.7e-115 419.1 285 73.7
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 4.6e-115 418.3 249 81.5
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 1.3e-114 416.8 274 75.9
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.7e-114 416.4 273 76.9
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 5.0e-114 414.8 250 82.4
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 6.6e-114 414.5 224 87.9
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 5.6e-113 411.4 241 83.8
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 7.3e-113 411.0 255 79.6
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 1.2e-112 410.2 279 73.8
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 2.1e-112 409.5 274 74.5
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 2.8e-112 409.1 237 81.9
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 3.6e-112 408.7 276 74.6
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 3.6e-112 408.7 241 82.6
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 6.2e-112 407.9 240 83.8
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 6.2e-112 407.9 277 74.0
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 1.8e-111 406.4 240 83.8
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 4.0e-111 405.2 277 73.6
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 4.0e-111 405.2 277 73.6
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 1.2e-110 403.7 240 81.2
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 1.2e-110 403.7 240 82.9
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 1.5e-110 403.3 265 76.2
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 2.0e-110 402.9 277 73.3
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 2.0e-110 402.9 240 79.6
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 3.4e-110 402.1 256 77.3
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 3.4e-110 402.1 235 81.3
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 4.4e-110 401.7 262 75.6
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 5.8e-110 401.4 250 79.2
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 7.5e-110 401.0 248 78.2
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 3.7e-109 398.7 262 75.2
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 3.7e-109 398.7 250 78.8
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 8.3e-109 397.5 265 74.0
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 1.9e-108 396.4 292 72.3
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 2.4e-108 396.0 403 56.1
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 3.2e-108 395.6 267 73.4
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 4.1e-108 395.2 242 77.7
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 1.6e-107 393.3 273 72.2
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 2.7e-107 392.5 258 76.0
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 6.0e-107 391.3 252 75.8
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 3.0e-106 389.0 272 71.3
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 3.0e-106 389.0 247 76.5
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 5.1e-106 388.3 259 73.0
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 8.6e-106 387.5 241 79.3
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 2.5e-105 386.0 273 72.5
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 3.3e-105 385.6 250 76.0
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 5.6e-105 384.8 283 70.0
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 8.1e-104 380.9 241 74.3
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 3.1e-103 379.0 248 75.0
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 3.1e-103 379.0 262 71.4
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 7.6e-102 374.4 225 78.2
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 1.3e-101 373.6 242 76.9
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 3.2e-100 369.0 235 76.2
Lj3g0025926 Lotus japonicus HOM05D004677 ORTHO05D005746 7.8e-99 364.4 192 92.7
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 6.6e-98 361.3 224 77.7
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 9.6e-97 357.5 236 72.5
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 2.0e-94 349.7 250 70.4
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 4.9e-93 345.1 258 66.7
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 1.6e-91 340.1 285 63.5
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 2.7e-91 339.3 268 66.0
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 7.8e-91 337.8 229 72.5
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 1.1e-89 334.0 280 63.9
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 9.6e-89 330.9 246 68.3
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 1.3e-85 320.5 242 62.8
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 1.1e-84 317.4 238 66.4
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 2.1e-83 313.2 249 61.8
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 1.6e-80 303.5 238 61.8
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 1.1e-79 300.8 194 78.9
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 2.2e-77 293.1 226 66.8
TAR627G1178 Trochodendron aralioides HOM05D004677 ORTHO05D005746 2.4e-76 289.7 189 73.0
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 3.2e-76 289.3 284 56.7
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 3.9e-74 282.3 242 61.2
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 6.2e-72 275.0 216 64.8
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 1.8e-71 273.5 296 52.7
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 9.0e-63 244.6 236 55.1
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 1.1e-60 237.7 279 52.7
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 4.6e-59 232.3 171 63.7
unitig_0.g733 Utricularia gibba HOM05D004677 ORTHO05D005746 8.7e-58 228.0 135 83.7
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.6e-56 223.8 162 72.8
MD17G1099100 Malus domestica HOM05D004677 ORTHO05D005746 3.4e-54 216.1 127 82.7
MCO13G274 Micromonas commoda HOM05D004677 ORTHO05D005746 4.8e-48 195.7 223 43.9
CDE08G1094 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 1.0e-45 188.0 126 73.8
Cre06.g294000 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 3.2e-44 183.0 220 43.6
PRCOL_00005478 Prasinoderma coloniale HOM05D004677 ORTHO05D005746 7.9e-43 178.3 219 42.0
CDE08G0164 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 3.9e-42 176.0 108 79.6
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 2.2e-37 160.2 116 72.4
SGA_v2.0_scaffold228G43250 Striga asiatica HOM05D004677 ORTHO05D005746 5.7e-33 145.6 87 75.9
Nn1g04350 Nelumbo nucifera HOM05D004677 ORTHO05D005746 2.2e-32 143.7 84 81.0
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 1.1e-31 141.4 148 53.4
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 3.1e-31 139.8 120 61.7
Cre06.g258600 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 1.7e-24 117.5 254 31.5
MD17G1099200 Malus domestica HOM05D004677 ORTHO05D005746 1.7e-24 117.5 101 64.4
DCAR_013148 Daucus carota HOM05D004677 ORTHO05D005746 4.8e-24 115.9 99 64.6
Nn3g18971 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.0e-18 98.2 69 71.0
AagrBONN_evm.TU.Sc2ySwM_117.4165 Anthoceros agrestis HOM05D004677 ORTHO05D005746 1.8e-15 87.4 86 52.3
arahy.Tifrunner.gnm1.ann1.B7RHXH Arachis hypogaea HOM05D004677 ORTHO05D005746 4.1e-15 86.3 180 37.8
FAN09G2974 Fragaria x ananassa HOM05D004677 ORTHO05D005746 7.7e-14 82.0 48 83.3
arahy.Tifrunner.gnm1.ann1.G1NRGV Arachis hypogaea HOM05D004677 ORTHO05D005746 3.0e-10 70.1 72 54.2
arahy.Tifrunner.gnm1.ann1.LRB7BH Arachis hypogaea HOM05D004677 ORTHO05D005746 8.9e-10 68.6 70 55.7
Aqoxy5G02648 Aquilegia oxysepala HOM05D003774 ORTHO05D009174 1.2e-09 68.2 204 29.4
Nitab4.5_0005616g0010 Nicotiana tabacum HOM05D003774 ORTHO05D009174 8.3e-08 62.0 241 26.1
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 1.4e-07 61.2 223 28.7
Ciclev10001943m.g Citrus clementina HOM05D003774 ORTHO05D009174 1.8e-07 60.8 244 25.4
Nitab4.5_0001463g0050 Nicotiana tabacum HOM05D003774 ORTHO05D009174 5.4e-07 59.3 228 25.4
PGSC0003DMG402025647 Solanum tuberosum HOM05D003774 ORTHO05D009174 7.0e-07 58.9 242 26.0
VMungo1080G0925 Vigna mungo HOM05D003774 ORTHO05D009174 7.0e-07 58.9 242 24.8
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 9.2e-07 58.5 174 28.2
Sopen11g022610 Solanum pennellii HOM05D003774 ORTHO05D009174 9.2e-07 58.5 242 24.8
TWI59G1355 Tripterygium wilfordii HOM05D003774 ORTHO05D009174 9.2e-07 58.5 250 26.8
AagrBONN_evm.TU.Sc2ySwM_117.58 Anthoceros agrestis HOM05D004677 ORTHO05D074401 4.6e-06 56.2 53 49.1
Lsat_1_v5_gn_1_25820 Lactuca sativa HOM05D003774 ORTHO05D009174 4.6e-06 56.2 243 25.9
Solyc11g027840.2 Solanum lycopersicum HOM05D003774 ORTHO05D009174 4.6e-06 56.2 242 25.2
Ciclev10030258m.g Citrus clementina HOM05D004677 ORTHO05D005746 5.9e-06 55.8 37 70.3
MBI09_g10676_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D009174 7.8e-06 55.5 222 26.6


User provided reference genes

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