Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 0.0e+00 1290.0 647 100.0
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 0.0e+00 1095.1 682 82.7
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 0.0e+00 1084.7 672 83.9
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 2.3e-290 1001.9 670 77.9
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 6.2e-280 967.2 686 74.3
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 3.1e-279 964.9 681 74.2
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 1.7e-277 959.1 682 74.2
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 6.4e-277 957.2 682 74.2
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 2.8e-272 941.8 683 73.1
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 8.1e-272 940.3 683 73.1
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 2.1e-264 915.6 683 71.4
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 9.0e-255 883.6 683 69.7
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 1.9e-228 796.2 687 62.7
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 2.7e-227 792.3 693 62.5
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 2.5e-225 785.8 669 64.4
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.4e-223 780.0 670 63.0
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 2.4e-223 779.2 681 61.5
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 2.0e-222 776.2 673 62.6
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 7.7e-222 774.2 674 62.2
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 7.2e-220 767.7 667 62.8
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 6.1e-219 764.6 683 60.9
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 1.0e-218 763.8 687 61.1
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 6.7e-218 761.1 679 59.9
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.7e-216 756.5 707 60.7
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 3.1e-215 752.3 672 61.3
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 9.1e-215 750.7 670 60.4
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 3.8e-213 745.3 671 60.4
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 1.9e-212 743.0 679 59.6
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 7.9e-211 737.6 673 60.9
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 8.8e-210 734.2 672 60.3
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 4.4e-209 731.9 666 60.4
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 7.4e-209 731.1 678 59.3
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 8.2e-208 727.6 680 59.1
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.1e-207 725.7 669 60.1
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 3.1e-207 725.7 672 59.7
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.1e-207 725.3 680 58.8
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 7.0e-207 724.5 678 58.8
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 7.0e-207 724.5 678 59.4
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 1.2e-206 723.8 685 58.1
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 1.2e-206 723.8 608 64.1
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 3.4e-206 722.2 675 59.1
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 4.5e-206 721.8 673 59.4
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 5.9e-206 721.5 677 59.5
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 5.9e-206 721.5 671 58.0
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 7.7e-206 721.1 677 58.6
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 1.1e-204 717.2 675 58.7
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 4.2e-204 715.3 690 58.0
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 9.4e-204 714.1 672 58.8
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.1e-203 713.0 669 58.4
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 2.1e-203 713.0 683 57.4
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 4.7e-203 711.8 678 57.7
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 8.0e-203 711.1 675 58.5
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 3.9e-202 708.8 691 56.9
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 5.7e-201 704.9 696 56.3
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 7.4e-201 704.5 672 57.1
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 1.8e-199 699.9 677 57.9
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 2.4e-199 699.5 679 56.8
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 2.2e-197 693.0 675 56.6
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 2.2e-197 693.0 676 58.3
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 1.1e-196 690.6 682 57.0
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 1.1e-196 690.6 675 56.4
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.9e-196 689.9 680 57.1
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 1.9e-196 689.9 675 56.3
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 4.7e-195 685.3 677 56.0
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 4.0e-194 682.2 596 61.9
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 4.0e-194 682.2 672 56.0
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 2.6e-193 679.5 675 56.0
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 9.7e-193 677.6 675 55.0
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 9.7e-193 677.6 677 54.7
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.4e-191 673.7 673 56.8
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 1.4e-191 673.7 656 56.9
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 1.8e-191 673.3 675 54.4
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 2.4e-191 672.9 690 53.6
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 3.1e-191 672.5 675 54.7
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 2.0e-190 669.8 688 55.7
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 2.7e-190 669.5 667 56.5
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 2.7e-190 669.5 672 56.1
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 2.9e-189 666.0 678 56.3
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 5.5e-188 661.8 682 57.0
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 1.2e-187 660.6 679 54.1
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 4.7e-187 658.7 673 56.2
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 2.3e-186 656.4 682 53.8
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 3.4e-185 652.5 686 54.4
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.4e-183 647.1 691 53.7
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 2.4e-183 646.4 689 54.6
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 5.4e-183 645.2 678 54.6
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 7.0e-183 644.8 667 54.6
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 9.1e-183 644.4 713 53.2
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 1.6e-182 643.7 611 56.6
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 2.0e-182 643.3 677 53.3
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 7.7e-182 641.3 667 54.3
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.3e-181 640.6 713 51.9
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 2.9e-181 639.4 686 52.2
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 1.1e-180 637.5 667 54.1
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 7.2e-180 634.8 679 52.6
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.6e-179 633.6 676 52.5
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 1.6e-179 633.6 685 54.0
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 8.0e-179 631.3 685 54.5
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 3.0e-178 629.4 673 53.2
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.7e-176 623.6 682 54.3
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 1.4e-175 620.5 669 52.5
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 7.0e-175 618.2 670 53.4
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 9.2e-175 617.8 672 52.8
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 3.5e-174 615.9 698 51.1
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 3.5e-174 615.9 705 50.4
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 7.3e-172 608.2 679 52.9
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 1.2e-171 607.4 650 53.1
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 5.2e-170 602.1 679 50.2
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 7.0e-167 591.7 670 51.6
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 4.6e-166 589.0 693 50.6
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 2.3e-162 576.6 662 51.2
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 2.6e-161 573.2 702 49.7
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.1e-159 567.8 667 49.8
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 6.0e-158 562.0 668 50.0
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 5.1e-157 558.9 652 51.2
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 5.6e-156 555.4 652 50.0
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 2.8e-155 553.1 663 49.6
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 3.2e-151 539.7 631 50.4
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 7.1e-151 538.5 508 56.9
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 1.2e-150 537.7 515 58.3
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.0e-149 533.1 667 48.4
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 6.6e-149 531.9 508 56.5
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.2e-147 525.4 645 48.1
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 2.9e-144 516.5 665 47.2
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.7e-142 510.0 675 46.2
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 8.7e-141 505.0 530 52.5
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 5.6e-140 502.3 696 43.7
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 4.4e-137 492.7 695 43.9
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 7.8e-134 481.9 513 54.0
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 6.4e-128 462.2 291 79.0
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.1e-127 461.5 687 43.4
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 7.1e-127 458.8 375 69.1
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 7.1e-119 432.2 547 47.7
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 3.0e-117 426.8 673 42.5
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 5.7e-116 422.5 618 41.7
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 2.8e-115 420.2 463 52.3
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.1e-114 418.3 400 57.5
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.4e-114 417.9 509 49.5
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 2.0e-113 414.1 655 41.8
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 3.4e-105 386.7 693 37.2
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 8.8e-101 372.1 462 48.9
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 2.5e-95 354.0 641 37.3
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.5e-95 354.0 587 40.0
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 4.2e-95 353.2 452 48.2
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 4.7e-94 349.7 702 36.2
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.9e-88 330.5 358 52.8
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 4.2e-87 326.6 409 46.2
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 5.5e-87 326.2 569 39.2
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 2.9e-80 303.9 270 62.2
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.2e-78 298.5 704 34.1
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 4.0e-77 293.5 724 32.6
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.7e-76 289.7 290 56.9
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.8e-72 276.9 332 46.4
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 8.8e-69 265.8 290 49.0
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 7.0e-66 256.1 412 42.0
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 1.4e-61 241.9 261 54.8
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 1.1e-58 232.3 640 32.0
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 6.6e-56 223.0 610 31.1
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 8.0e-54 216.1 224 51.3
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 3.3e-39 167.5 771 25.6
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 9.9e-36 156.0 147 59.9
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 4.3e-31 140.6 247 37.7
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 2.1e-30 138.3 142 52.8
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 8.7e-24 116.3 122 52.5
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 9.6e-23 112.8 140 52.1
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 1.8e-21 108.6 105 58.1
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 3.1e-21 107.8 61 90.2
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 1.9e-18 98.6 88 54.5
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 4.2e-18 97.4 81 60.5
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 3.9e-16 90.9 66 62.1
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.8e-14 84.7 105 47.6
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 6.2e-14 83.6 114 43.0
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 6.2e-14 83.6 49 75.5
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 1.4e-13 82.4 60 63.3
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 3.1e-13 81.3 68 52.9
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 3.1e-13 81.3 85 52.9
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 1.5e-12 79.0 60 61.7
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 4.5e-12 77.4 151 37.7
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-11 75.5 40 90.0
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 4.6e-09 67.4 48 64.6
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 2.3e-08 65.1 46 65.2
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 5.6e-07 60.5 55 67.3
Cre13.g589300 Chlamydomonas reinhardtii HOM05D003691 ORTHO05D004288 7.4e-07 60.1 201 23.4
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 8.1e-06 56.6 119 38.7


User provided reference genes

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