Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19457_v3 Cicer arietinum L. HOM05D000401 ORTHO05D000252 3.0e-67 258.8 181 100.0
TPR.G4658 Trifolium pratense HOM05D000401 ORTHO05D000252 1.1e-40 170.6 165 56.4
Medtr4g052040 Medicago truncatula HOM05D000401 ORTHO05D000252 1.6e-39 166.8 172 53.5
Psat7g186960 Pisum sativum HOM05D000401 ORTHO05D000252 3.3e-37 159.1 166 56.0
Medtr4g052060 Medicago truncatula HOM05D000401 ORTHO05D000252 2.9e-33 146.0 161 52.8
arahy.Tifrunner.gnm1.ann1.C47IXG Arachis hypogaea HOM05D000401 ORTHO05D000252 2.7e-31 139.4 190 45.3
VMungo1127G1596 Vigna mungo HOM05D000401 ORTHO05D000252 1.0e-30 137.5 181 45.3
arahy.Tifrunner.gnm1.ann1.WRPW7I Arachis hypogaea HOM05D000401 ORTHO05D000252 2.5e-29 132.9 173 46.2
Phvul.011G097500 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 8.9e-27 124.4 183 43.7
Lj3g0004934 Lotus japonicus HOM05D000401 ORTHO05D000252 3.4e-26 122.5 190 52.6
Lalb_Chr03g0028321 Lupinus albus HOM05D000401 ORTHO05D000252 1.7e-25 120.2 187 40.6
Glyma.11G180300 Glycine max HOM05D000401 ORTHO05D000252 1.1e-24 117.5 183 50.8
Glyma.12G093200 Glycine max HOM05D000401 ORTHO05D000252 6.0e-23 111.7 181 49.7
Lalb_Chr24g0393421 Lupinus albus HOM05D000401 ORTHO05D000252 1.1e-21 107.5 177 42.9
Glyma.12G187500 Glycine max HOM05D000401 ORTHO05D000252 1.9e-21 106.7 164 45.7
Lj3g0016701 Lotus japonicus HOM05D000401 ORTHO05D000252 2.8e-20 102.8 169 48.5
Medtr5g079710 Medicago truncatula HOM05D000401 ORTHO05D000252 6.2e-20 101.7 170 49.4
Psat5g222800 Pisum sativum HOM05D000401 ORTHO05D000252 1.2e-18 97.4 170 45.9
TPR.G3489 Trifolium pratense HOM05D000401 ORTHO05D000252 1.2e-18 97.4 168 37.5
arahy.Tifrunner.gnm1.ann1.27Q2VK Arachis hypogaea HOM05D000401 ORTHO05D000252 4.4e-18 95.5 175 36.0
arahy.Tifrunner.gnm1.ann1.4G75Y2 Arachis hypogaea HOM05D000401 ORTHO05D000252 4.4e-18 95.5 175 36.0
Haze_23332 Corylus avellana HOM05D000401 ORTHO05D000252 4.4e-18 95.5 158 36.7
CiPaw.13G131900 Carya illinoinensis HOM05D000401 ORTHO05D000252 5.8e-18 95.1 170 35.9
Phvul.005G121000 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 9.9e-18 94.4 165 37.0
TPR.G39869 Trifolium pratense HOM05D000401 ORTHO05D000252 1.9e-16 90.1 165 37.6
QL01p011633 Quercus lobata HOM05D000401 ORTHO05D000252 1.2e-15 87.4 165 32.1
QL01p011376 Quercus lobata HOM05D000401 ORTHO05D000252 2.7e-15 86.3 156 33.3
VMungo1080G1155 Vigna mungo HOM05D000401 ORTHO05D000252 5.1e-14 82.0 156 35.3
Duzib170G0836 Durio zibethinus HOM05D000401 ORTHO05D000252 8.6e-14 81.3 169 32.5
Glyma.13G314000 Glycine max HOM05D000401 ORTHO05D000252 1.6e-12 77.0 163 44.2
Gohir.D09G097400 Gossypium hirsutum HOM05D000401 ORTHO05D000252 2.8e-12 76.3 178 28.7
Thecc.09G276200 Theobroma cacao HOM05D000401 ORTHO05D000252 2.8e-12 76.3 167 33.5
TWI79G1481 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 8.1e-12 74.7 175 32.0
CSS0000964 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 8.9e-11 71.2 166 31.9
Manes.11G165100 Manihot esculenta HOM05D000401 ORTHO05D000252 2.0e-10 70.1 166 26.5
Cfa009971 Carpinus fangiana HOM05D000401 ORTHO05D000252 5.8e-10 68.6 167 41.3
Gorai.006G114100 Gossypium raimondii HOM05D000401 ORTHO05D000252 1.7e-09 67.0 195 27.2
Atru.chr3.3144 Acer truncatum HOM05D000401 ORTHO05D000252 3.8e-09 65.9 183 30.1
SalBow6G3591 Salvia bowleyana HOM05D000401 ORTHO05D000252 1.3e-06 57.4 161 31.7
FvH4_3g25970 Fragaria vesca HOM05D000401 ORTHO05D000252 3.0e-06 56.2 179 29.1
MD03G1152300 Malus domestica HOM05D000401 ORTHO05D000252 3.0e-06 56.2 173 27.2
MD11G1172500 Malus domestica HOM05D000401 ORTHO05D000252 3.0e-06 56.2 177 37.3
Cc01_g08630 Coffea canephora HOM05D000401 ORTHO05D000252 3.9e-06 55.8 156 29.5
Prupe.6G139400 Prunus persica HOM05D000401 ORTHO05D000252 3.9e-06 55.8 169 32.0
Potri.004G200500 Populus trichocarpa HOM05D000401 ORTHO05D000252 6.6e-06 55.1 171 28.1


User provided reference genes

Program Settings