Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 8.8e-64 246.9 134 100.0
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 3.7e-54 214.9 135 88.9
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 3.1e-53 211.8 128 89.1
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 7.0e-53 210.7 138 84.8
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 3.2e-50 201.8 124 84.7
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 1.2e-49 199.9 124 84.7
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 1.0e-48 196.8 128 82.0
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 1.4e-48 196.4 127 83.5
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 5.2e-48 194.5 126 84.1
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 4.4e-47 191.4 119 84.9
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 6.3e-46 187.6 126 81.0
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 1.6e-44 183.0 126 80.2
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 2.1e-41 172.6 124 79.0
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 3.6e-41 171.8 130 70.8
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 4.7e-41 171.4 134 73.1
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 1.0e-40 170.2 131 72.5
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 1.4e-40 169.9 115 77.4
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 1.8e-40 169.5 109 81.7
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 2.0e-39 166.0 127 72.4
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 5.7e-39 164.5 127 72.4
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 5.7e-39 164.5 105 79.0
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 7.5e-39 164.1 126 73.8
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 7.5e-39 164.1 134 68.7
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 9.8e-39 163.7 132 72.0
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 1.7e-38 162.9 122 75.4
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 4.9e-38 161.4 130 71.5
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 6.4e-38 161.0 130 69.2
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 8.3e-38 160.6 133 69.2
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 1.1e-37 160.2 133 68.4
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 1.1e-37 160.2 133 68.4
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 1.4e-37 159.8 102 81.4
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 1.6e-36 156.4 131 71.0
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 2.0e-36 156.0 121 72.7
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 2.0e-36 156.0 107 77.6
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 3.5e-36 155.2 110 77.3
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 4.6e-36 154.8 134 67.2
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 5.9e-36 154.5 131 67.2
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 7.8e-36 154.1 129 66.7
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 7.8e-36 154.1 125 68.0
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.0e-35 153.7 110 75.5
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 1.3e-35 153.3 129 64.3
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 1.3e-35 153.3 132 66.7
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 1.7e-35 152.9 130 64.6
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.3e-35 152.5 130 68.5
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 2.9e-35 152.1 135 66.7
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.9e-35 152.1 119 73.1
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 3.9e-35 151.8 100 74.0
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 5.0e-35 151.4 130 64.6
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 6.6e-35 151.0 121 67.8
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 8.6e-35 150.6 97 76.3
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.1e-34 150.2 128 68.0
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 1.5e-34 149.8 123 66.7
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 1.9e-34 149.4 142 62.7
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 1.9e-34 149.4 115 76.5
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 3.3e-34 148.7 99 73.7
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 3.3e-34 148.7 99 73.7
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 3.3e-34 148.7 99 73.7
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 5.6e-34 147.9 122 65.6
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 7.3e-34 147.5 145 57.9
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 1.2e-33 146.7 127 68.5
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 1.6e-33 146.4 102 69.6
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 1.6e-33 146.4 131 65.6
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 1.6e-33 146.4 117 70.1
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 1.6e-33 146.4 120 70.0
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 2.1e-33 146.0 145 57.2
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 2.1e-33 146.0 130 66.2
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 2.1e-33 146.0 118 69.5
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 2.1e-33 146.0 117 70.1
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 3.6e-33 145.2 99 70.7
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 3.6e-33 145.2 99 71.7
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 3.6e-33 145.2 118 69.5
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 1.0e-32 143.7 90 80.0
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 1.0e-32 143.7 144 60.4
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 1.4e-32 143.3 107 71.0
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 2.3e-32 142.5 99 69.7
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 2.3e-32 142.5 132 64.4
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 3.1e-32 142.1 116 69.8
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 3.1e-32 142.1 100 74.0
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 4.0e-32 141.7 148 62.8
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 6.8e-32 141.0 134 59.0
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 8.9e-32 140.6 146 58.2
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 2.6e-31 139.0 91 76.9
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 4.4e-31 138.3 99 74.7
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 5.8e-31 137.9 130 62.3
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 7.5e-31 137.5 130 60.0
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 9.8e-31 137.1 139 58.3
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 2.2e-30 136.0 91 75.8
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 2.9e-30 135.6 86 77.9
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 3.7e-30 135.2 131 58.0
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 3.7e-30 135.2 135 59.3
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 4.1e-29 131.7 88 72.7
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 5.4e-29 131.3 92 75.0
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 9.2e-29 130.6 134 58.2
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 9.2e-29 130.6 96 72.9
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 1.2e-28 130.2 92 71.7
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 1.6e-28 129.8 142 53.5
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 2.0e-28 129.4 142 52.1
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 2.7e-28 129.0 96 71.9
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 7.8e-28 127.5 107 67.3
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 1.0e-27 127.1 142 52.8
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 1.7e-27 126.3 155 52.3
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 6.6e-27 124.4 132 53.8
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 7.3e-26 120.9 105 61.0
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 1.8e-24 116.3 133 54.1
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 8.9e-24 114.0 141 49.6
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 5.8e-23 111.3 139 49.6
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 7.1e-21 104.4 139 46.8
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 3.3e-18 95.5 109 47.7
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 1.2e-17 93.6 121 45.5
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 3.6e-17 92.0 105 54.3
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 3.7e-14 82.0 115 40.0
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.1e-11 71.6 53 67.9
COL.COLO4_19857 Corchorus olitorius HOM05D006639 ORTHO05D008339 1.5e-10 70.1 62 69.4
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.5e-10 70.1 52 67.3
Nn053s41924 Nelumbo nucifera HOM05D006639 ORTHO05D008339 7.3e-10 67.8 69 55.1
Nn1g05216 Nelumbo nucifera HOM05D006639 ORTHO05D008339 7.3e-10 67.8 69 55.1
Nn1g05215 Nelumbo nucifera HOM05D006639 ORTHO05D008339 9.6e-10 67.4 52 65.4
Lalb_Chr03g0028111 Lupinus albus HOM05D006639 ORTHO05D008339 1.1e-08 63.9 39 79.5
Lsat_1_v5_gn_6_29620 Lactuca sativa HOM05D000297 ORTHO05D000193 3.4e-07 58.9 90 37.8
AUR62009752 Chenopodium quinoa HOM05D006639 ORTHO05D008339 1.3e-06 57.0 48 58.3
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 6.4e-06 54.7 49 65.3


User provided reference genes

Program Settings