Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 1.8e-213 745.7 405 100.0
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.0e-187 660.2 405 84.7
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 7.2e-186 654.1 405 82.0
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 1.5e-183 646.4 405 87.4
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 5.5e-178 627.9 407 78.6
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 2.9e-171 605.5 407 76.2
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 8.9e-168 594.0 405 80.0
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 3.7e-166 588.6 405 72.6
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 5.0e-163 578.2 406 74.9
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 1.5e-162 576.6 406 74.1
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 3.3e-162 575.5 413 71.4
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 8.9e-160 567.4 332 82.8
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.7e-150 536.6 326 77.6
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 3.5e-148 528.9 330 75.8
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 1.3e-147 526.9 331 76.4
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 8.6e-147 524.2 331 74.6
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.5e-146 523.5 407 68.3
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 3.3e-146 522.3 334 74.6
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 6.2e-145 518.1 405 70.1
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.1e-144 517.3 323 75.5
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 1.5e-143 513.5 406 67.7
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.5e-143 513.5 323 73.7
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.5e-143 513.5 328 73.8
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 3.4e-143 512.3 406 69.0
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 4.4e-143 511.9 325 73.8
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 5.8e-143 511.5 325 73.5
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 5.8e-143 511.5 324 72.8
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 9.9e-143 510.8 406 66.0
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.7e-142 510.0 406 65.8
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 6.4e-142 508.1 325 74.2
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 8.4e-142 507.7 326 72.4
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 2.4e-141 506.1 325 72.9
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 3.2e-141 505.8 334 72.2
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 3.2e-141 505.8 334 72.2
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 3.2e-141 505.8 406 65.8
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 2.3e-139 499.6 336 69.6
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 8.7e-139 497.7 337 70.3
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 1.1e-136 490.7 333 70.9
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 1.4e-136 490.3 335 71.0
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.8e-136 490.0 313 72.5
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 6.9e-136 488.0 327 70.6
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 9.0e-136 487.6 333 69.7
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 9.0e-136 487.6 324 71.0
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 2.0e-135 486.5 408 66.7
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 4.4e-135 485.3 408 63.2
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 4.4e-135 485.3 327 70.3
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 1.3e-134 483.8 412 62.4
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 2.2e-134 483.0 322 70.2
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 2.2e-134 483.0 333 68.2
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.9e-134 482.6 334 67.7
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 3.8e-134 482.3 406 60.8
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 6.4e-134 481.5 329 69.3
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 8.4e-134 481.1 408 66.9
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 3.2e-133 479.2 330 68.2
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 4.2e-133 478.8 410 60.2
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 4.2e-133 478.8 405 61.2
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 9.3e-133 477.6 324 68.5
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 9.3e-133 477.6 340 69.1
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.2e-132 477.2 332 68.1
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 2.1e-132 476.5 328 68.0
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.7e-132 476.1 335 66.9
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 3.5e-132 475.7 333 67.0
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 1.0e-131 474.2 332 66.0
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 1.3e-131 473.8 331 66.5
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.7e-131 473.4 324 67.3
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 2.3e-131 473.0 329 67.8
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 2.3e-131 473.0 390 68.2
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 3.0e-131 472.6 405 62.7
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 3.9e-131 472.2 331 66.8
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 3.9e-131 472.2 331 66.5
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 1.1e-130 470.7 326 68.4
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.1e-130 470.7 326 67.5
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 1.1e-130 470.7 326 68.4
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.1e-130 470.7 326 67.5
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.5e-130 470.3 330 66.1
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 1.9e-130 469.9 410 60.2
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 2.5e-130 469.5 326 68.1
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 3.3e-130 469.2 333 67.9
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 7.3e-130 468.0 331 69.5
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 7.3e-130 468.0 333 67.0
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.3e-129 467.2 408 61.5
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 8.1e-129 464.5 324 67.3
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.1e-128 464.2 347 65.1
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.4e-128 463.8 314 70.4
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 1.4e-128 463.8 333 66.1
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.4e-128 463.0 341 65.7
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 9.0e-128 461.1 411 63.5
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 3.4e-127 459.1 437 55.4
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 3.8e-126 455.7 328 67.4
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 3.5e-124 449.1 325 67.1
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 3.3e-122 442.6 334 65.9
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 4.3e-122 442.2 313 66.8
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 1.4e-120 437.2 320 66.6
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 6.9e-120 434.9 287 70.7
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 6.9e-120 434.9 297 68.4
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 7.6e-119 431.4 334 61.7
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 1.9e-117 426.8 323 62.5
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 1.9e-109 400.2 267 72.7
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.7e-108 396.4 343 57.1
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 3.5e-108 396.0 311 63.7
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 4.6e-100 369.0 250 68.4
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 2.3e-99 366.7 323 54.8
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 1.3e-97 360.9 318 56.6
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.8e-97 359.0 326 54.9
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 8.8e-91 338.2 314 52.9
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.1e-90 337.8 314 53.2
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.9e-83 312.8 229 66.4
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 7.0e-40 169.1 99 74.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 1.1e-35 155.2 327 35.5
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 1.2e-34 151.8 93 72.0
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 2.3e-30 137.5 130 55.4
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 1.9e-21 107.8 77 62.3
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.8e-20 104.0 65 66.2
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 6.9e-19 99.4 49 91.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 7.6e-18 95.9 60 75.0
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.3e-17 95.1 272 27.6
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 6.6e-14 82.8 53 69.8
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 1.8e-11 74.7 128 37.5


User provided reference genes

Program Settings