Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 3.5e-101 371.7 200 100.0
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.6e-85 319.7 198 87.4
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 6.5e-79 297.7 200 81.5
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 1.9e-78 296.2 198 81.8
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 1.2e-77 293.5 198 81.3
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 1.4e-76 290.0 199 79.9
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.3e-74 283.5 197 78.7
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 4.8e-74 281.6 197 78.2
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 5.3e-73 278.1 197 76.6
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 1.0e-71 273.9 197 76.6
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 6.5e-71 271.2 196 76.0
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 6.5e-71 271.2 197 75.6
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 2.5e-70 269.2 201 73.1
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 7.2e-70 267.7 200 73.5
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-69 266.9 196 75.5
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 3.6e-69 265.4 190 72.6
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 7.9e-69 264.2 200 71.0
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 1.0e-68 263.8 189 73.0
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 1.8e-68 263.1 170 75.9
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 2.3e-68 262.7 190 72.1
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 3.0e-68 262.3 189 72.5
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 3.0e-68 262.3 199 70.9
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 5.2e-68 261.5 198 73.2
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 5.2e-68 261.5 198 73.2
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 6.7e-68 261.2 200 70.0
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 1.1e-67 260.4 200 69.5
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.1e-67 260.4 200 71.5
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.5e-67 260.0 200 71.0
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 2.0e-67 259.6 198 69.2
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 2.0e-67 259.6 200 69.5
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 2.6e-67 259.2 200 69.0
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.6e-67 259.2 198 71.2
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.6e-67 259.2 198 71.2
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 3.3e-67 258.8 198 71.2
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 3.3e-67 258.8 198 71.2
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 3.3e-67 258.8 200 71.5
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.4e-67 258.5 197 70.6
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 5.7e-67 258.1 200 70.0
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 5.7e-67 258.1 200 70.0
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 7.4e-67 257.7 199 69.8
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 9.7e-67 257.3 198 69.2
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 9.7e-67 257.3 191 72.8
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 1.3e-66 256.9 201 69.2
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.7e-66 256.5 198 69.2
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.7e-66 256.5 196 69.9
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 2.2e-66 256.1 196 71.4
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 3.7e-66 255.4 198 69.2
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 4.8e-66 255.0 177 75.7
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 6.3e-66 254.6 200 68.5
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 6.3e-66 254.6 167 75.4
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 8.2e-66 254.2 190 71.1
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 1.1e-65 253.8 200 70.0
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 1.1e-65 253.8 200 70.0
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 1.1e-65 253.8 200 70.0
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 1.1e-65 253.8 200 70.0
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 1.1e-65 253.8 198 71.2
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 1.4e-65 253.4 200 67.5
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 1.4e-65 253.4 200 67.0
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.4e-65 253.4 201 70.6
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 1.4e-65 253.4 201 68.2
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 1.8e-65 253.1 200 69.5
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 1.8e-65 253.1 200 68.5
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 1.8e-65 253.1 161 78.3
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 3.1e-65 252.3 200 69.5
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 4.1e-65 251.9 197 70.6
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 4.1e-65 251.9 159 78.6
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 4.1e-65 251.9 197 68.0
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 4.1e-65 251.9 200 69.5
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 4.1e-65 251.9 200 69.0
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 5.3e-65 251.5 166 78.3
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 5.3e-65 251.5 200 69.5
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 5.3e-65 251.5 200 69.5
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 5.3e-65 251.5 167 74.3
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 7.0e-65 251.1 197 68.0
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 7.0e-65 251.1 194 69.1
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 9.1e-65 250.8 195 69.7
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.2e-64 250.4 200 66.0
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.2e-64 250.4 201 69.7
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.2e-64 250.4 194 70.1
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.6e-64 250.0 200 68.5
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 2.0e-64 249.6 159 79.2
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 2.0e-64 249.6 200 69.0
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 2.0e-64 249.6 200 68.0
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 2.6e-64 249.2 198 69.2
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 2.6e-64 249.2 198 69.2
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 3.5e-64 248.8 194 68.6
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 7.7e-64 247.7 194 68.6
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 7.7e-64 247.7 195 65.6
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.8e-63 245.4 200 69.0
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 3.8e-63 245.4 205 63.9
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 1.9e-62 243.0 148 82.4
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 5.5e-62 241.5 192 71.4
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 1.2e-61 240.4 210 64.8
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 1.2e-61 240.4 201 65.2
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 8.8e-60 234.2 200 64.0
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 8.8e-60 234.2 165 73.9
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 4.8e-58 228.4 200 61.0
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 1.9e-54 216.5 145 76.6
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 4.5e-48 195.3 207 51.2
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 5.0e-47 191.8 195 49.2
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.7e-42 175.6 160 53.8
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.7e-42 175.6 160 53.8
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 3.1e-41 172.6 159 52.8
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.4e-41 171.8 201 47.3
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 1.2e-40 170.6 157 52.9
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 2.7e-40 169.5 105 82.9
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.9e-40 168.3 201 46.3
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.5e-38 163.7 103 83.5
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 3.3e-38 162.5 143 65.0
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 4.7e-37 158.7 94 87.2
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.0e-35 153.3 102 76.5
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 9.8e-35 151.0 103 78.6
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 6.2e-29 131.7 108 66.7
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.8e-28 130.2 90 77.8
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 9.8e-27 124.4 88 67.0
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 8.6e-23 111.3 161 37.9
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 1.1e-22 110.9 71 80.3
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 6.8e-20 101.7 192 31.2
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-17 93.6 88 61.4
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 1.9e-17 93.6 164 31.7
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 2.7e-16 89.7 93 51.6
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 5.1e-15 85.5 104 48.1
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 8.6e-15 84.7 90 50.0
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 1.8e-12 77.0 156 32.1
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.4e-09 67.4 120 37.5
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 3.2e-09 66.2 38 78.9
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 5.1e-07 58.9 100 41.0


User provided reference genes

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