Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 3.2e-75 285.0 146 100.0
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 3.5e-58 228.4 146 79.5
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.1e-54 216.9 147 80.3
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 4.5e-53 211.5 145 77.9
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 5.8e-53 211.1 145 78.6
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 2.2e-52 209.1 145 75.9
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 8.4e-52 207.2 127 83.5
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 2.5e-48 195.7 131 74.0
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 4.8e-47 191.4 141 72.3
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.2e-45 186.8 131 69.5
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 1.5e-45 186.4 136 68.4
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.5e-45 186.4 133 71.4
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 2.6e-45 185.7 129 72.1
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 3.4e-45 185.3 132 71.2
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 5.8e-45 184.5 148 70.9
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 5.8e-45 184.5 132 70.5
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 7.6e-45 184.1 130 71.5
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.9e-44 182.2 139 67.6
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 2.9e-44 182.2 130 71.5
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 3.8e-44 181.8 139 67.6
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 4.9e-44 181.4 127 72.4
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 6.5e-44 181.0 145 62.1
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 6.5e-44 181.0 145 63.4
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 1.1e-43 180.3 148 69.6
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.1e-43 180.3 134 67.9
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.1e-43 180.3 143 62.2
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.1e-43 180.3 124 72.6
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 1.4e-43 179.9 129 72.1
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.9e-43 179.5 145 61.4
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 5.5e-43 177.9 131 71.8
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 1.2e-42 176.8 138 65.9
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.6e-42 176.4 114 72.8
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 2.1e-42 176.0 126 69.8
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 2.7e-42 175.6 120 72.5
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 7.9e-42 174.1 119 71.4
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 1.0e-41 173.7 143 62.9
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.3e-41 173.3 142 59.2
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.3e-41 173.3 136 67.6
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 2.3e-41 172.6 119 70.6
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 3.0e-41 172.2 119 70.6
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 5.1e-41 171.4 127 65.4
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.5e-40 169.9 146 61.0
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.5e-40 169.9 125 64.8
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.9e-40 169.5 149 59.7
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.5e-40 169.1 141 66.7
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.5e-40 169.1 141 66.7
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.5e-40 169.1 141 66.7
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 3.3e-40 168.7 134 65.7
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 4.3e-40 168.3 119 68.1
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 4.3e-40 168.3 134 63.4
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 5.7e-40 167.9 140 64.3
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 7.4e-40 167.5 136 67.6
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 7.4e-40 167.5 136 67.6
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 2.2e-39 166.0 137 64.2
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 2.2e-39 166.0 128 64.1
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 2.2e-39 166.0 132 63.6
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 2.8e-39 165.6 119 67.2
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 4.8e-39 164.9 141 65.2
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 4.8e-39 164.9 140 65.0
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 6.3e-39 164.5 133 66.2
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 6.3e-39 164.5 133 66.2
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 1.1e-38 163.7 140 65.7
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 1.8e-38 162.9 97 83.5
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 2.4e-38 162.5 117 70.9
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 5.3e-38 161.4 146 60.3
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 1.2e-37 160.2 113 72.6
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 1.5e-37 159.8 133 63.2
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 7.7e-37 157.5 133 59.4
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.7e-36 156.4 117 69.2
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 6.5e-36 154.5 117 65.0
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.1e-35 153.7 128 60.2
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.9e-35 152.9 153 53.6
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 1.9e-35 152.9 101 72.3
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 2.5e-35 152.5 121 61.2
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 7.2e-35 151.0 119 61.3
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.7e-34 149.1 134 56.7
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 2.3e-33 146.0 137 57.7
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 9.7e-32 140.6 108 65.7
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 3.7e-31 138.7 119 60.5
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 1.4e-30 136.7 128 54.7
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 7.7e-29 131.0 110 60.0
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.0e-28 130.6 113 61.9
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.3e-28 130.2 105 65.7
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 5.0e-28 128.3 134 56.0
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 4.2e-27 125.2 100 63.0
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 3.6e-26 122.1 92 66.3
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.4e-25 120.2 105 61.9
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 2.0e-24 116.3 94 64.9
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 2.6e-24 115.9 91 63.7
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 5.7e-24 114.8 100 63.0
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 9.7e-24 114.0 127 48.8
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 6.3e-23 111.3 120 46.7
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 1.1e-22 110.5 120 47.5
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 4.1e-22 108.6 71 60.6
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 2.0e-21 106.3 110 50.9
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 2.9e-20 102.4 159 42.1
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 3.2e-19 99.0 115 47.0
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 9.4e-19 97.4 147 44.2
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 8.0e-18 94.4 116 48.3
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 4.8e-15 85.1 115 42.6
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 9.1e-14 80.9 49 75.5
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.0e-13 79.7 117 40.2
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.6e-13 79.3 118 40.7
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 3.8e-12 75.5 125 41.6
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 3.8e-12 75.5 113 42.5
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 1.1e-06 57.4 83 48.2


User provided reference genes

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