Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19183_v3 Cicer arietinum L. HOM05D004887 ORTHO05D006168 5.7e-147 524.2 267 100.0
TPR.G10217 Trifolium pratense HOM05D004887 ORTHO05D006168 2.6e-131 472.2 266 90.6
Medtr4g063570 Medicago truncatula HOM05D004887 ORTHO05D006168 1.3e-130 469.9 266 88.7
Glyma.11G141400 Glycine max HOM05D004887 ORTHO05D006168 8.5e-127 457.2 266 88.3
Lj3g0008400 Lotus japonicus HOM05D004887 ORTHO05D006168 1.0e-124 450.3 266 86.8
VMungo1127G0043 Vigna mungo HOM05D004887 ORTHO05D006168 1.4e-124 449.9 266 86.5
Glyma.12G064800 Glycine max HOM05D004887 ORTHO05D006168 2.6e-123 445.7 266 86.1
Phvul.011G065900 Phaseolus vulgaris HOM05D004887 ORTHO05D006168 2.8e-122 442.2 266 85.3
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea HOM05D004887 ORTHO05D006168 1.4e-121 439.9 267 84.6
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea HOM05D004887 ORTHO05D006168 1.4e-121 439.9 267 84.6
Lalb_Chr01g0003761 Lupinus albus HOM05D004887 ORTHO05D006168 1.5e-118 429.9 267 84.6
PGR102G2111 Punica granatum HOM05D004887 ORTHO05D006168 1.1e-110 403.7 257 78.2
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 1.2e-109 400.2 277 75.1
Duzib150G1309 Durio zibethinus HOM05D004887 ORTHO05D006168 2.8e-109 399.1 255 78.4
COL.COLO4_18471 Corchorus olitorius HOM05D004887 ORTHO05D006168 2.3e-108 396.0 257 77.0
QL01p032955 Quercus lobata HOM05D004887 ORTHO05D006168 2.3e-108 396.0 257 77.0
Actinidia07046 Actinidia chinensis HOM05D004887 ORTHO05D006168 6.8e-108 394.4 262 75.2
Cpa.g.sc190.13 Carica papaya HOM05D004887 ORTHO05D006168 1.2e-107 393.7 266 75.6
MD03G1097100 Malus domestica HOM05D004887 ORTHO05D006168 1.5e-107 393.3 257 76.3
MD11G1143700 Malus domestica HOM05D004887 ORTHO05D006168 1.5e-107 393.3 257 77.0
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea HOM05D004887 ORTHO05D006168 3.4e-107 392.1 280 74.3
Thecc.09G325700 Theobroma cacao HOM05D004887 ORTHO05D006168 4.4e-107 391.7 251 78.1
Psat7g217880 Pisum sativum HOM05D004887 ORTHO05D006168 1.3e-106 390.2 293 73.4
Gohir.A03G039700 Gossypium hirsutum HOM05D004887 ORTHO05D006168 2.9e-106 389.0 255 74.9
Gohir.D03G128400 Gossypium hirsutum HOM05D004887 ORTHO05D006168 6.4e-106 387.9 255 74.9
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 2.4e-105 386.0 257 76.3
Gorai.003G135100 Gossypium raimondii HOM05D004887 ORTHO05D006168 3.2e-105 385.6 255 74.5
Prupe.6G081500 Prunus persica HOM05D004887 ORTHO05D006168 5.4e-105 384.8 252 75.8
Atru.chr3.3838 Acer truncatum HOM05D004887 ORTHO05D006168 7.0e-105 384.4 266 74.8
FAN16G2077 Fragaria x ananassa HOM05D001446 ORTHO05D001360 1.2e-104 383.6 250 77.6
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 1.6e-104 383.3 257 73.2
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 2.0e-104 382.9 250 77.6
THA.LOC104799466 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 2.0e-104 382.9 266 72.9
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 7.8e-104 380.9 250 77.2
Manes.04G032300 Manihot esculenta HOM05D004887 ORTHO05D006168 7.8e-104 380.9 266 72.9
Ciclev10028710m.g Citrus clementina HOM05D004887 ORTHO05D006168 1.7e-103 379.8 265 73.6
FAN11G2539 Fragaria x ananassa HOM05D004887 ORTHO05D006168 1.7e-103 379.8 250 77.2
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 1.7e-103 379.8 257 76.3
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 3.0e-103 379.0 261 75.9
Actinidia37217 Actinidia chinensis HOM05D004887 ORTHO05D006168 3.9e-103 378.6 261 75.5
FAN25G2556 Fragaria x ananassa HOM05D004887 ORTHO05D006168 3.9e-103 378.6 250 76.4
AL8G36530 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 5.0e-103 378.3 265 72.5
Psat7g218040 Pisum sativum HOM05D004887 ORTHO05D006168 5.0e-103 378.3 211 89.1
AL781U10010 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 1.1e-102 377.1 258 73.6
Manes.11G133000 Manihot esculenta HOM05D004887 ORTHO05D006168 1.1e-102 377.1 266 72.2
AT5G59960 Arabidopsis thaliana HOM05D004887 ORTHO05D006168 1.5e-102 376.7 265 72.5
Cfa011464 Carpinus fangiana HOM05D004887 ORTHO05D006168 1.9e-102 376.3 265 72.8
Thhalv10013947m.g Eutrema salsugineum HOM05D004887 ORTHO05D006168 4.3e-102 375.2 261 73.6
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 7.3e-102 374.4 260 75.8
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 1.6e-101 373.2 260 74.6
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 3.6e-101 372.1 261 73.6
BcaB08g36206 Brassica carinata HOM05D004887 ORTHO05D006168 6.2e-101 371.3 261 71.6
Potri.009G028500 Populus trichocarpa HOM05D004887 ORTHO05D006168 6.2e-101 371.3 257 74.7
Hund18927 Selenicereus undatus HOM05D004887 ORTHO05D006168 1.1e-100 370.5 261 72.8
Haze_24049 Corylus avellana HOM05D004887 ORTHO05D006168 2.3e-100 369.4 258 73.6
BcaC04g19652 Brassica carinata HOM05D004887 ORTHO05D006168 3.1e-100 369.0 261 71.6
C09p52470 Brassica napus HOM05D004887 ORTHO05D006168 3.1e-100 369.0 261 71.6
BolC9t58114H Brassica oleracea HOM05D004887 ORTHO05D006168 3.1e-100 369.0 261 71.6
BraA10t43799Z Brassica rapa HOM05D004887 ORTHO05D006168 3.1e-100 369.0 261 71.6
Aqoxy4G02983 Aquilegia oxysepala HOM05D004887 ORTHO05D006168 5.2e-100 368.2 256 74.6
Sp6g21640 Schrenkiella parvula HOM05D004887 ORTHO05D006168 5.2e-100 368.2 261 71.6
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 8.9e-100 367.5 254 73.6
A10p17180 Brassica napus HOM05D004887 ORTHO05D006168 1.2e-99 367.1 261 71.3
TAR623G0510 Trochodendron aralioides HOM05D004887 ORTHO05D006168 1.5e-99 366.7 249 75.9
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 3.4e-99 365.5 261 73.6
Gorai.004G004400 Gossypium raimondii HOM05D004887 ORTHO05D006168 3.4e-99 365.5 249 73.5
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 4.4e-99 365.2 261 72.4
Psat7g218000 Pisum sativum HOM05D004887 ORTHO05D006168 7.5e-99 364.4 195 91.3
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.3e-98 363.6 261 73.2
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 2.9e-98 362.5 260 69.6
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 3.7e-98 362.1 261 72.8
Gohir.D08G010900 Gossypium hirsutum HOM05D004887 ORTHO05D006168 4.9e-98 361.7 249 73.1
SGA_v2.0_scaffold61G21266 Striga asiatica HOM05D004887 ORTHO05D006168 4.9e-98 361.7 252 74.6
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 6.4e-98 361.3 261 72.8
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 1.1e-97 360.5 263 71.9
CAN.G661.4 Capsicum annuum HOM05D004887 ORTHO05D006168 1.4e-97 360.1 257 70.8
THA.LOC104810819 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 1.4e-97 360.1 266 69.5
Duzib168G0637 Durio zibethinus HOM05D004887 ORTHO05D006168 4.1e-97 358.6 250 74.0
Solyc11g073300.2 Solanum lycopersicum HOM05D004887 ORTHO05D006168 5.4e-97 358.2 254 72.4
Sopen11g030920 Solanum pennellii HOM05D004887 ORTHO05D006168 5.4e-97 358.2 254 72.0
Cc01_g12500 Coffea canephora HOM05D004887 ORTHO05D006168 2.1e-96 356.3 257 72.4
PSO384G2944 Papaver somniferum HOM05D004887 ORTHO05D006168 2.7e-96 355.9 255 70.6
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 4.6e-96 355.1 250 72.0
Sc21g0005570 Simmondsia chinensis HOM05D004887 ORTHO05D006168 4.6e-96 355.1 261 68.6
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 1.0e-95 354.0 261 69.3
PSO339G5095 Papaver somniferum HOM05D004887 ORTHO05D006168 2.3e-95 352.8 255 70.2
AUR62001822 Chenopodium quinoa HOM05D004887 ORTHO05D006168 3.0e-95 352.4 261 69.0
A03p11380 Brassica napus HOM05D004887 ORTHO05D006168 1.1e-94 350.5 266 68.4
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 1.5e-94 350.1 261 67.4
Aa31LG1G12090 Aethionema arabicum HOM05D004887 ORTHO05D006168 2.5e-94 349.4 265 68.7
Dinv03548 Davidia involucrata HOM05D004887 ORTHO05D006168 2.5e-94 349.4 231 77.1
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 4.3e-94 348.6 259 71.0
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 4.3e-94 348.6 261 70.1
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 4.0e-92 342.0 286 62.9
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 8.9e-92 340.9 261 70.1
MSTRG.17840 Avicennia marina HOM05D004887 ORTHO05D006168 2.0e-91 339.7 252 69.8
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 3.4e-91 339.0 259 68.3
ATR0559G318 Amborella trichopoda HOM05D004887 ORTHO05D006168 4.9e-90 335.1 253 67.6
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea HOM05D004887 ORTHO05D006168 4.9e-90 335.1 211 80.6
ECA247G3571 Erigeron canadensis HOM05D004887 ORTHO05D006168 8.4e-90 334.3 266 67.3
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 1.9e-89 333.2 259 68.3
Lsat_1_v5_gn_8_77921 Lactuca sativa HOM05D004887 ORTHO05D006168 2.7e-88 329.3 258 67.4
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 8.6e-87 324.3 263 65.0
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 1.9e-86 323.2 254 65.7
Nn2g10420 Nelumbo nucifera HOM05D004887 ORTHO05D006168 5.6e-86 321.6 218 73.4
TWI79G0894 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 7.3e-86 321.2 201 77.1
Os01g0151600 Oryza sativa ssp. japonica HOM05D004887 ORTHO05D006168 4.7e-85 318.5 249 64.7
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.1e-84 317.4 263 66.9
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 3.1e-84 315.8 254 66.5
HPP92_015526 Vanilla planifolia HOM05D004887 ORTHO05D006168 6.8e-84 314.7 263 64.6
Sabra16G0142900 Salix brachista HOM05D001446 ORTHO05D001360 2.6e-83 312.8 352 53.4
SalBow2G3032 Salvia bowleyana HOM05D004887 ORTHO05D006168 5.8e-83 311.6 253 65.6
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 1.3e-82 310.5 264 61.7
unitig_899.g14894 Utricularia gibba HOM05D004887 ORTHO05D006168 2.9e-82 309.3 252 62.7
Gohir.A08G000181 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.1e-81 307.4 227 68.3
Duzib170G0837 Durio zibethinus HOM05D004887 ORTHO05D006168 7.8e-80 301.2 270 61.5
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 1.9e-78 296.6 225 69.8
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 3.3e-78 295.8 303 56.4
Zm00001eb124290 Zea mays HOM05D004887 ORTHO05D006168 1.3e-77 293.9 244 62.3
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 1.4e-76 290.4 212 67.0
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 4.2e-73 278.9 249 63.9
vmacro03096 Vaccinium macrocarpon HOM05D004887 ORTHO05D006168 2.7e-72 276.2 273 57.9
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 3.9e-71 272.3 193 69.9
Carub.0008s2049 Capsella rubella HOM05D004887 ORTHO05D006168 1.7e-66 256.9 166 76.5
Pp3c8_24390 Physcomitrium patens HOM05D004887 ORTHO05D006168 2.7e-64 249.6 263 49.4
Pp3c24_20310 Physcomitrium patens HOM05D004887 ORTHO05D006168 2.3e-63 246.5 256 50.0
TWI31G1179 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 3.9e-63 245.7 258 55.0
BraA03t10452Z Brassica rapa HOM05D004887 ORTHO05D006168 1.9e-62 243.4 166 72.3
Mapoly0001s0555 Marchantia polymorpha HOM05D004887 ORTHO05D006168 4.8e-61 238.8 255 48.2
CARHR273600 Cardamine hirsuta HOM05D004887 ORTHO05D006168 8.1e-61 238.0 163 73.0
SMO118G0033 Selaginella moellendorffii HOM05D004887 ORTHO05D006168 8.1e-61 238.0 269 48.3
PSO384G0451 Papaver somniferum HOM05D004887 ORTHO05D006168 3.4e-59 232.6 187 64.7
CBR_g46654 Chara braunii HOM05D004887 ORTHO05D006168 5.9e-51 205.3 242 43.0
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis HOM05D004887 ORTHO05D006168 5.0e-50 202.2 197 50.8
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 6.5e-50 201.8 145 71.7
Sabra09G0019700 Salix brachista HOM05D004887 ORTHO05D006168 2.5e-46 189.9 184 59.2
CARHR273590 Cardamine hirsuta HOM05D004887 ORTHO05D006168 4.4e-30 136.0 102 67.6
C03p13130 Brassica napus HOM05D004887 ORTHO05D006168 3.3e-22 109.8 109 56.9
Duzib205G1865 Durio zibethinus HOM05D004887 ORTHO05D006168 1.2e-14 84.7 111 45.9
Nitab4.5_0000610g0050 Nicotiana tabacum HOM05D004887 ORTHO05D006168 2.0e-11 73.9 237 30.8
HanXRQChr07g0192801 Helianthus annuus HOM05D004887 ORTHO05D225384 1.5e-06 57.8 55 54.5


User provided reference genes

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