Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 3.5e-52 208.0 103 100.0
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 5.9e-52 207.2 103 99.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.3e-50 201.4 103 96.1
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 8.9e-48 193.4 103 93.2
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 2.0e-47 192.2 103 93.2
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 7.5e-47 190.3 103 91.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 7.5e-47 190.3 103 91.3
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.3e-46 189.5 103 92.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 4.9e-46 187.6 103 88.3
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 1.6e-44 182.6 103 86.4
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 2.3e-43 178.7 103 80.6
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 3.0e-43 178.3 105 79.0
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.1e-42 176.4 103 81.6
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 3.3e-42 174.9 100 80.0
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 9.5e-42 173.3 99 80.8
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.2e-41 172.9 102 81.4
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.2e-41 172.9 102 81.4
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.2e-41 172.9 102 81.4
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.2e-41 172.9 100 78.0
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 3.6e-41 171.4 100 77.0
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 4.7e-41 171.0 99 78.8
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.1e-40 169.9 105 77.1
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 3.1e-40 168.3 104 76.9
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 3.1e-40 168.3 99 77.8
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 5.2e-40 167.5 97 80.4
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 5.2e-40 167.5 100 77.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 8.9e-40 166.8 97 79.4
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 1.2e-39 166.4 97 78.4
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 2.0e-39 165.6 96 78.1
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 7.5e-39 163.7 103 73.8
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 9.8e-39 163.3 103 73.8
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 9.8e-39 163.3 99 75.8
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.3e-38 162.9 102 75.5
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.7e-38 162.5 106 73.6
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 2.2e-38 162.2 99 72.7
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.9e-38 161.8 97 74.2
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.9e-38 161.8 105 74.3
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 6.4e-38 160.6 95 80.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.4e-37 159.5 104 73.1
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 1.9e-37 159.1 104 72.1
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.9e-37 159.1 102 73.5
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.9e-37 159.1 98 72.4
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 2.4e-37 158.7 99 72.7
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 3.2e-37 158.3 104 72.1
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 3.2e-37 158.3 98 72.4
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 3.2e-37 158.3 104 72.1
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 3.2e-37 158.3 104 72.1
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 3.2e-37 158.3 100 73.0
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.1e-37 157.9 96 75.0
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 5.4e-37 157.5 100 73.0
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 7.0e-37 157.1 97 71.1
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 9.2e-37 156.8 106 68.9
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 9.2e-37 156.8 105 71.4
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.2e-36 156.4 100 72.0
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.2e-36 156.4 102 72.5
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 1.2e-36 156.4 99 71.7
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-36 156.4 102 72.5
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.2e-36 156.4 102 72.5
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.2e-36 156.4 100 72.0
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.2e-36 156.4 98 72.4
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.2e-36 156.4 100 72.0
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.6e-36 156.0 100 72.0
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.6e-36 156.0 101 73.3
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.6e-36 156.0 98 71.4
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.6e-36 156.0 102 73.5
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 6.0e-36 154.1 94 73.4
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.0e-35 153.3 81 93.8
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 2.3e-35 152.1 99 70.7
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.3e-35 152.1 96 69.8
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 3.0e-35 151.8 137 58.4
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 5.1e-35 151.0 100 70.0
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 5.1e-35 151.0 105 69.5
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 6.6e-35 150.6 102 71.6
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 6.6e-35 150.6 101 68.3
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.1e-34 149.8 80 90.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 3.3e-34 148.3 93 75.3
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 3.3e-34 148.3 96 76.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.3e-34 147.9 101 72.3
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.3e-34 147.9 101 72.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 7.3e-34 147.1 96 70.8
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 7.3e-34 147.1 103 70.9
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.2e-33 146.4 102 68.6
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 1.6e-33 146.0 101 71.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.1e-33 145.6 143 53.8
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 2.1e-33 145.6 93 75.3
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.4e-32 142.9 95 72.6
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.8e-32 142.5 101 69.3
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.8e-32 142.5 90 73.3
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.1e-32 141.7 104 65.4
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 5.2e-32 141.0 90 72.2
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 6.8e-32 140.6 80 82.5
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 8.9e-32 140.2 96 66.7
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 2.2e-30 135.6 87 74.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.9e-30 135.2 86 76.7
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 1.9e-29 132.5 80 76.2
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.2e-29 131.7 106 64.2
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 3.2e-29 131.7 88 72.7
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 3.5e-28 128.3 91 63.7
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 6.0e-28 127.5 88 67.0
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.3e-27 125.6 91 64.8
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 3.0e-27 125.2 82 73.2
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.4e-24 115.5 95 54.7
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 8.9e-24 113.6 82 67.1
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 3.4e-23 111.7 88 55.7
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 4.4e-23 111.3 78 67.9
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 2.2e-22 109.0 87 63.2
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 8.4e-22 107.1 77 67.5
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 4.2e-21 104.8 71 71.8
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 3.9e-19 98.2 57 73.7
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.9e-18 95.9 54 79.6
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.1e-17 92.4 71 57.7
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 2.8e-17 92.0 54 72.2
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 9.3e-13 77.0 52 67.3
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.7e-12 75.5 53 73.6
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 5.6e-10 67.8 53 64.2
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.6e-09 65.1 50 62.0


User provided reference genes

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