Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 7.1e-170 600.5 305 100.0
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 2.4e-157 558.9 305 92.8
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 3.1e-157 558.5 307 93.2
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 4.8e-150 534.6 306 90.8
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.1e-138 496.9 307 84.7
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 2.5e-138 495.7 305 83.6
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 6.7e-136 487.6 303 82.8
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 9.7e-135 483.8 311 83.0
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 4.8e-134 481.5 306 82.7
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 1.4e-133 479.9 303 81.5
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.4e-133 479.9 303 81.5
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 3.2e-130 468.8 310 78.7
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 4.5e-124 448.4 306 75.5
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 5.0e-123 444.9 305 74.8
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 2.3e-120 436.0 307 74.6
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.0e-120 435.6 305 74.1
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.0e-120 435.6 305 73.8
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 4.0e-120 435.3 305 73.4
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 5.2e-120 434.9 305 73.8
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.2e-120 434.9 305 73.8
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 6.8e-120 434.5 305 75.1
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 6.8e-120 434.5 305 74.1
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 4.4e-119 431.8 306 74.5
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 5.7e-119 431.4 307 72.3
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 1.3e-118 430.3 306 72.5
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.3e-118 430.3 305 73.1
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 2.8e-118 429.1 312 71.8
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 2.8e-118 429.1 305 73.1
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.4e-117 426.8 305 72.8
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 1.4e-117 426.8 310 72.6
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 4.1e-117 425.2 305 72.5
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 5.4e-117 424.9 308 70.8
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 1.6e-116 423.3 305 73.1
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 2.0e-116 422.9 312 71.5
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 2.7e-116 422.5 316 70.6
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 3.5e-116 422.2 305 72.1
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 3.5e-116 422.2 305 71.8
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 3.5e-116 422.2 316 69.6
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 5.9e-116 421.4 316 69.9
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 1.3e-115 420.2 316 69.9
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 2.3e-115 419.5 305 71.5
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 3.8e-115 418.7 305 71.5
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 3.8e-115 418.7 305 70.5
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 5.0e-115 418.3 309 72.2
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 5.0e-115 418.3 309 71.8
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 1.5e-114 416.8 335 67.8
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 1.5e-114 416.8 335 67.8
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 4.3e-114 415.2 316 69.9
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 5.6e-114 414.8 305 70.5
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 7.3e-114 414.5 305 71.5
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 6.1e-113 411.4 305 70.2
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 1.0e-112 410.6 305 69.5
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 1.4e-112 410.2 319 69.3
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 5.2e-112 408.3 305 68.5
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 8.9e-112 407.5 310 67.1
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 1.2e-111 407.1 310 67.7
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 1.5e-111 406.8 305 69.5
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 2.0e-111 406.4 310 67.7
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 2.0e-111 406.4 310 67.4
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 2.0e-111 406.4 305 70.2
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 2.6e-111 406.0 305 68.5
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 5.7e-111 404.8 310 67.1
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 5.7e-111 404.8 310 67.1
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 9.8e-111 404.1 310 67.4
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.7e-110 403.3 305 69.5
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 2.2e-110 402.9 310 67.1
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 2.2e-110 402.9 305 68.9
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 2.2e-110 402.9 305 68.9
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 2.9e-110 402.5 310 66.5
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 3.7e-110 402.1 305 68.9
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 4.9e-110 401.7 310 67.4
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 2.4e-109 399.4 311 66.6
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 3.2e-109 399.1 305 68.9
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 3.2e-109 399.1 310 66.5
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 4.1e-109 398.7 276 74.3
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 2.0e-108 396.4 288 71.9
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 1.0e-107 394.0 276 72.8
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.0e-107 394.0 288 70.8
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 2.3e-107 392.9 283 72.8
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 5.0e-107 391.7 273 73.3
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 5.0e-107 391.7 275 72.4
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 1.1e-106 390.6 339 61.7
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 3.3e-106 389.0 351 60.1
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 5.6e-106 388.3 315 66.3
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 2.8e-105 386.0 303 65.0
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 3.1e-104 382.5 324 66.0
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 9.2e-101 370.9 327 62.7
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 2.0e-100 369.8 305 64.9
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 1.9e-98 363.2 310 62.6
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.2e-97 360.5 275 68.0
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 2.2e-94 349.7 307 64.2
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 7.1e-93 344.7 324 59.0
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 3.5e-92 342.4 323 59.4
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.1e-90 337.4 345 55.9
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 5.8e-87 325.1 276 63.4
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 1.7e-86 323.6 319 55.2
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 2.3e-83 313.2 299 57.9
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 6.2e-81 305.1 230 69.6
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 4.4e-79 298.9 241 65.6
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 1.4e-77 293.9 237 65.4
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 1.2e-76 290.8 319 53.6
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 5.1e-75 285.4 258 60.5
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 5.6e-74 282.0 206 71.8
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 4.9e-70 268.9 212 67.9
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 1.3e-65 254.2 305 47.5
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 5.5e-61 238.8 267 48.3
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 3.4e-55 219.5 267 44.6
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 1.3e-51 207.6 196 61.2
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 3.4e-47 193.0 319 37.6
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 3.8e-46 189.5 300 36.7
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 4.5e-39 166.0 159 61.0
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 1.0e-38 164.9 248 37.1
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 1.9e-37 160.6 253 37.9
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.1e-32 141.7 182 47.3
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 1.5e-31 141.0 120 60.8
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 5.5e-29 132.5 243 36.2
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.7e-25 120.9 88 71.6
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 7.2e-21 105.5 74 68.9
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 1.5e-18 97.8 97 54.6
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 3.5e-15 86.7 78 55.1
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 1.1e-13 81.6 138 40.6
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 2.4e-08 63.9 60 45.0
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 9.1e-08 62.0 79 49.4


User provided reference genes

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