Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 2.0e-46 188.7 92 100.0
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 1.2e-40 169.5 92 91.3
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 6.1e-40 167.2 92 89.1
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.0e-39 166.4 92 89.1
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 1.0e-39 166.4 92 89.1
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 1.4e-39 166.0 92 88.0
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 7.4e-38 160.2 91 84.6
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 2.0e-35 152.1 89 83.1
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 2.6e-35 151.8 82 92.7
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 1.0e-34 149.8 89 83.1
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 1.7e-34 149.1 89 83.1
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.1e-33 146.4 87 80.5
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 3.6e-32 141.4 86 79.1
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 3.6e-32 141.4 90 76.7
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 6.1e-32 140.6 86 79.1
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 6.1e-32 140.6 86 79.1
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 1.8e-31 139.0 90 75.6
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 1.8e-31 139.0 90 77.8
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 3.0e-31 138.3 86 79.1
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 4.0e-31 137.9 90 75.6
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 5.2e-31 137.5 86 76.7
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 5.2e-31 137.5 88 76.1
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 5.2e-31 137.5 87 74.7
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 5.2e-31 137.5 90 74.4
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 5.2e-31 137.5 90 75.6
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 6.7e-31 137.1 86 77.9
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 6.7e-31 137.1 90 76.7
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 8.8e-31 136.7 90 73.3
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 8.8e-31 136.7 90 76.7
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 8.8e-31 136.7 87 73.6
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 8.8e-31 136.7 88 76.1
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 8.8e-31 136.7 90 74.4
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 1.2e-30 136.3 90 75.6
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 1.2e-30 136.3 90 75.6
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.5e-30 136.0 90 73.3
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.0e-30 135.6 90 73.3
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 2.0e-30 135.6 86 76.7
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 2.0e-30 135.6 90 75.6
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 2.0e-30 135.6 86 76.7
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 2.0e-30 135.6 86 76.7
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 2.0e-30 135.6 86 75.6
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 2.6e-30 135.2 90 74.4
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 2.6e-30 135.2 86 75.6
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 2.6e-30 135.2 86 75.6
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 2.6e-30 135.2 86 76.7
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.3e-30 134.8 86 77.9
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 5.7e-30 134.0 90 72.2
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 5.7e-30 134.0 90 74.4
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 7.5e-30 133.7 86 76.7
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 7.5e-30 133.7 86 75.6
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 7.5e-30 133.7 90 71.1
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 7.5e-30 133.7 86 77.9
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 9.7e-30 133.3 86 75.6
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 9.7e-30 133.3 86 75.6
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 9.7e-30 133.3 86 75.6
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.7e-29 132.5 86 76.7
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 1.7e-29 132.5 90 71.1
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 1.7e-29 132.5 90 71.1
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 2.2e-29 132.1 90 72.2
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 2.2e-29 132.1 86 74.4
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.8e-29 131.7 90 72.2
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.7e-29 131.3 92 70.7
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 3.7e-29 131.3 86 74.4
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 3.7e-29 131.3 86 74.4
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 4.8e-29 131.0 90 71.1
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 6.3e-29 130.6 87 75.9
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 8.2e-29 130.2 86 72.1
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 8.2e-29 130.2 83 78.3
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.1e-28 129.8 90 68.9
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 1.1e-28 129.8 90 67.8
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 1.1e-28 129.8 90 71.1
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 1.4e-28 129.4 90 71.1
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.8e-28 129.0 82 76.8
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 1.8e-28 129.0 86 73.3
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 5.3e-28 127.5 90 67.8
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 9.1e-28 126.7 83 77.1
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 2.0e-27 125.6 90 66.7
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 2.0e-27 125.6 86 67.4
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 2.7e-27 125.2 83 74.7
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 4.5e-27 124.4 87 69.0
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 4.5e-27 124.4 86 72.1
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 8.5e-26 120.2 74 78.4
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 1.9e-25 119.0 79 72.2
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 1.9e-25 119.0 90 62.2
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 2.5e-25 118.6 86 67.4
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 1.6e-24 115.9 84 70.2
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 1.6e-24 115.9 85 65.9
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 3.6e-24 114.8 84 66.7
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 1.4e-23 112.8 85 62.4
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 4.0e-23 111.3 84 63.1
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 8.8e-23 110.2 85 62.4
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.2e-22 109.8 84 61.9
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 1.2e-22 109.8 71 73.2
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 1.5e-22 109.4 84 61.9
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 4.4e-22 107.8 86 60.5
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 7.5e-22 107.1 84 65.5
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 9.8e-22 106.7 82 61.0
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.3e-21 106.3 82 61.0
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 1.7e-21 105.9 82 59.8
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 2.8e-21 105.1 82 58.5
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 2.8e-21 105.1 82 58.5
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 2.8e-21 105.1 82 58.5
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 2.8e-21 105.1 82 58.5
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 1.1e-20 103.2 82 57.3
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 1.8e-20 102.4 82 57.3
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 1.8e-20 102.4 82 57.3
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 3.5e-19 98.2 79 60.8
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 5.9e-19 97.4 86 51.2
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 7.7e-19 97.1 61 77.0
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 8.5e-18 93.6 85 60.0
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 3.2e-17 91.7 60 73.3
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 5.5e-17 90.9 90 54.4
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 1.0e-15 86.7 61 70.5
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 2.3e-15 85.5 68 60.3
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 8.8e-15 83.6 50 84.0
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.5e-14 82.8 60 68.3
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 2.6e-14 82.0 50 82.0
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 7.5e-14 80.5 82 48.8
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 8.3e-13 77.0 83 50.6
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 1.2e-11 73.2 44 79.5
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 1.1e-09 66.6 60 55.0
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 7.3e-09 63.9 49 63.3
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 7.3e-09 63.9 49 63.3
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.6e-08 62.8 49 63.3


User provided reference genes

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