Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18906_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 6.9e-122 440.7 224 100.0
Medtr8g005070 Medicago truncatula HOM05D007287 ORTHO05D008965 9.6e-31 137.9 198 45.5
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 1.4e-29 134.0 209 44.0
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 1.7e-27 127.1 202 42.6
Psat2g191120 Pisum sativum HOM05D007287 ORTHO05D008965 3.2e-26 122.9 170 47.6
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 5.5e-26 122.1 207 41.5
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 5.1e-24 115.5 199 40.7
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 1.5e-23 114.0 199 40.2
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 6.5e-19 98.6 251 37.1
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 7.9e-17 91.7 189 37.0
Ca_18907_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 6.7e-16 88.6 135 43.7
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 1.1e-15 87.8 191 36.6
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.5e-15 87.4 211 37.9
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 3.3e-15 86.3 188 35.1
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 5.7e-15 85.5 186 38.2
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.3e-14 84.3 188 35.1
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 1.3e-14 84.3 188 35.1
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 2.8e-14 83.2 196 33.7
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.7e-14 82.8 187 33.7
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.4e-13 80.9 189 36.5
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 1.4e-13 80.9 172 37.2
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 2.4e-13 80.1 178 35.4
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 2.0e-12 77.0 189 34.4
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 2.0e-12 77.0 207 35.3
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 4.5e-12 75.9 197 32.0
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 4.5e-12 75.9 133 39.1
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 7.7e-12 75.1 182 33.0
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 7.7e-12 75.1 225 32.9
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 7.7e-12 75.1 225 32.9
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 1.0e-11 74.7 222 31.5
Medtr4g079340 Medicago truncatula HOM05D007287 ORTHO05D008965 1.0e-11 74.7 126 43.7
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 1.0e-11 74.7 218 30.7
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 1.3e-11 74.3 176 36.4
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.7e-11 73.9 191 34.0
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 3.8e-11 72.8 208 32.7
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 1.4e-10 70.9 188 31.4
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.2e-10 69.7 141 39.0
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 5.5e-10 68.9 195 31.8
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 5.5e-10 68.9 107 42.1
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 7.2e-10 68.6 175 38.3
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 1.6e-09 67.4 195 31.8
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 1.6e-09 67.4 171 32.2
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 2.1e-09 67.0 202 31.7
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 2.1e-09 67.0 183 32.2
TPR.G34860 Trifolium pratense HOM05D007287 ORTHO05D008965 2.1e-09 67.0 131 38.9
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 2.7e-09 66.6 146 36.3
Psat7g166880 Pisum sativum HOM05D007287 ORTHO05D008965 7.9e-09 65.1 115 40.9
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 1.4e-08 64.3 243 28.0
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 1.8e-08 63.9 162 30.9
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 3.9e-08 62.8 164 32.9
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 1.1e-07 61.2 200 30.5
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 1.5e-07 60.8 175 32.6
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 5.7e-07 58.9 173 30.1
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 9.7e-07 58.2 164 33.5
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 1.3e-06 57.8 124 36.3
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.3e-06 57.8 192 29.7
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 2.8e-06 56.6 188 32.4
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 4.8e-06 55.8 188 32.4
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 4.8e-06 55.8 172 30.8
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 6.3e-06 55.5 164 32.9
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 8.2e-06 55.1 164 29.3


User provided reference genes

Program Settings