Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 2.4e-193 678.7 359 100.0
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.9e-169 599.4 360 88.9
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 4.0e-164 581.6 363 85.1
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 5.8e-163 577.8 361 86.1
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.1e-158 563.5 361 84.8
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 7.4e-158 560.8 361 84.8
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 4.5e-155 551.6 364 82.4
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 1.2e-152 543.5 363 82.4
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 7.9e-152 540.8 339 85.3
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.2e-144 516.9 297 91.9
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 4.3e-142 508.4 364 77.5
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 5.3e-140 501.5 359 74.9
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 6.9e-140 501.1 361 77.0
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 9.1e-140 500.7 359 75.8
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.5e-139 500.0 364 75.0
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.5e-139 500.0 359 75.8
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.0e-139 499.6 360 75.6
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.0e-139 499.6 339 77.6
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 2.6e-139 499.2 360 73.9
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 2.9e-138 495.7 340 77.6
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 5.0e-138 495.0 361 75.3
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 8.5e-138 494.2 336 78.0
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 8.5e-138 494.2 336 79.2
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 2.5e-137 492.7 337 77.7
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 3.2e-137 492.3 360 74.2
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 3.2e-137 492.3 364 73.6
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 4.2e-137 491.9 348 75.6
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 5.5e-137 491.5 360 74.7
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 7.2e-137 491.1 332 78.9
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 9.4e-137 490.7 364 73.6
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 9.4e-137 490.7 351 76.6
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.2e-136 490.3 338 78.7
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.6e-136 490.0 360 74.4
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 1.6e-136 490.0 360 74.4
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.6e-136 490.0 365 73.2
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 2.1e-136 489.6 360 73.6
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.7e-136 489.2 360 73.6
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 3.6e-136 488.8 365 72.9
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 3.6e-136 488.8 336 78.0
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 7.9e-136 487.6 360 73.9
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 7.9e-136 487.6 364 72.8
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 2.3e-135 486.1 336 76.8
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 3.0e-135 485.7 364 73.6
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 3.9e-135 485.3 336 76.5
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 5.1e-135 485.0 374 72.5
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.1e-135 485.0 345 76.2
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 8.8e-135 484.2 345 75.9
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 1.5e-134 483.4 362 74.0
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.5e-134 483.4 359 73.0
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 3.3e-134 482.3 336 76.5
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 9.7e-134 480.7 338 78.1
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 9.7e-134 480.7 365 72.3
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.3e-133 480.3 360 73.9
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 1.7e-133 479.9 336 75.9
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 4.8e-133 478.4 340 75.0
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 4.8e-133 478.4 342 76.0
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 4.8e-133 478.4 342 76.0
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 4.8e-133 478.4 371 72.2
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.1e-132 477.2 368 70.7
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 1.4e-132 476.9 371 72.0
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.4e-132 476.9 350 74.6
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 7.0e-132 474.6 342 73.7
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 9.1e-132 474.2 348 73.9
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.5e-131 473.4 364 70.9
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 2.6e-131 472.6 361 72.0
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 4.5e-131 471.9 337 75.4
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 1.0e-130 470.7 368 69.8
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 8.5e-130 467.6 366 69.7
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 1.1e-129 467.2 364 69.2
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.5e-129 466.1 351 71.8
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 4.2e-129 465.3 365 69.9
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.7e-128 462.6 336 73.2
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 8.0e-128 461.1 353 72.2
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.0e-127 460.7 360 70.3
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.0e-127 460.7 365 69.9
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.0e-127 460.7 365 69.9
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 1.4e-127 460.3 332 72.6
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 3.9e-127 458.8 364 69.0
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 6.7e-127 458.0 364 69.5
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 6.7e-127 458.0 360 70.3
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 6.7e-127 458.0 365 69.9
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 3.3e-126 455.7 339 72.9
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 5.7e-126 454.9 360 70.0
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 5.7e-126 454.9 338 72.5
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 1.3e-125 453.8 365 69.0
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 2.6e-123 446.0 330 70.9
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 8.8e-119 431.0 269 82.2
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 2.0e-118 429.9 360 67.2
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 9.1e-116 421.0 269 80.3
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.3e-109 400.6 348 61.8
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 6.1e-104 381.7 357 61.6
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.2e-102 377.5 357 58.8
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.7e-98 363.6 294 69.4
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 5.0e-98 362.1 338 58.3
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 6.6e-82 308.5 291 62.5
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 3.3e-81 306.2 246 70.7
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.2e-75 287.7 262 62.6
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 1.1e-73 281.2 363 51.8
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 2.5e-73 280.0 271 60.5
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 3.1e-71 273.1 347 47.0
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 7.6e-70 268.5 227 66.1
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 1.2e-67 261.2 336 46.7
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 5.6e-65 252.3 289 51.6
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.2e-61 240.4 322 45.3
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.2e-61 240.4 154 79.9
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.8e-61 239.6 192 68.8
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.6e-56 224.2 167 76.0
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 8.1e-56 221.9 185 65.9
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 9.3e-52 208.4 184 64.1
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 2.8e-48 196.8 191 57.1
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.1e-40 170.6 159 61.6
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 2.6e-38 163.7 257 42.0
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.0e-37 161.8 91 89.0
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.1e-36 158.3 115 74.8
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 2.0e-25 120.9 133 51.9
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 1.4e-23 114.8 66 86.4
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 6.5e-21 105.9 57 91.2
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 5.1e-18 96.3 88 58.0
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.0e-13 82.0 143 47.6
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 5.0e-13 79.7 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 2.5e-12 77.4 46 82.6


User provided reference genes

Program Settings