Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 4.9e-88 327.8 168 100.0
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 2.4e-74 282.3 163 86.5
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 5.8e-73 277.7 170 85.3
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 1.4e-71 273.1 169 82.2
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 1.9e-71 272.7 168 79.2
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 9.3e-71 270.4 168 81.5
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 3.0e-69 265.4 168 76.2
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 3.9e-69 265.0 168 78.6
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 2.5e-68 262.3 166 78.3
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 2.5e-68 262.3 166 78.3
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 8.2e-67 257.3 169 76.3
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 2.9e-64 248.8 161 77.0
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 2.5e-63 245.7 161 77.6
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 5.9e-57 224.6 161 68.9
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 1.0e-56 223.8 139 80.6
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.7e-56 223.0 163 68.1
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 6.5e-56 221.1 168 67.3
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 8.5e-56 220.7 163 68.7
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 1.9e-55 219.5 164 67.1
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 3.2e-55 218.8 163 66.9
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 4.2e-55 218.4 162 67.3
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 7.2e-55 217.6 164 67.1
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 2.7e-54 215.7 166 68.1
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 3.6e-54 215.3 162 67.9
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 7.9e-54 214.2 166 67.5
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.0e-53 213.8 160 68.1
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 1.4e-53 213.4 163 67.5
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 3.9e-53 211.8 164 65.9
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 5.1e-53 211.5 161 64.6
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 5.1e-53 211.5 176 63.6
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 6.7e-53 211.1 162 65.4
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 6.7e-53 211.1 160 66.2
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 6.7e-53 211.1 160 66.2
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 6.7e-53 211.1 163 66.3
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.1e-52 210.3 174 63.8
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.1e-52 210.3 164 66.5
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 1.1e-52 210.3 166 66.3
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.5e-52 209.9 163 65.6
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 1.5e-52 209.9 163 65.6
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 1.5e-52 209.9 155 67.7
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 2.0e-52 209.5 158 65.8
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 2.0e-52 209.5 178 62.9
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 2.5e-52 209.1 177 62.7
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 3.3e-52 208.8 178 62.9
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 4.3e-52 208.4 160 65.6
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 5.7e-52 208.0 154 66.9
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 7.4e-52 207.6 159 67.3
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 7.4e-52 207.6 159 67.3
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 9.7e-52 207.2 174 62.1
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 9.7e-52 207.2 165 64.8
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 1.7e-51 206.5 177 62.7
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 2.2e-51 206.1 165 64.2
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 3.7e-51 205.3 155 63.9
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 3.7e-51 205.3 166 62.7
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 6.3e-51 204.5 163 60.7
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 8.2e-51 204.1 163 60.7
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 1.1e-50 203.8 163 60.1
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.1e-50 203.8 162 63.6
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 1.1e-50 203.8 162 63.0
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 1.1e-50 203.8 155 65.2
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 1.4e-50 203.4 161 62.1
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.4e-50 203.4 174 59.8
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 1.8e-50 203.0 165 60.0
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 2.4e-50 202.6 159 64.2
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 2.4e-50 202.6 163 60.1
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 4.1e-50 201.8 176 60.8
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 4.1e-50 201.8 163 60.1
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 4.1e-50 201.8 163 60.1
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 9.1e-50 200.7 162 59.3
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 9.1e-50 200.7 162 59.3
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 9.1e-50 200.7 162 61.1
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 1.2e-49 200.3 162 59.3
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 1.2e-49 200.3 162 58.6
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 1.2e-49 200.3 162 59.3
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 1.2e-49 200.3 166 61.4
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.0e-49 199.5 164 62.2
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 2.6e-49 199.1 154 64.9
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 4.5e-49 198.4 162 61.7
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 5.9e-49 198.0 163 62.0
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 5.9e-49 198.0 173 61.3
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 5.9e-49 198.0 162 63.0
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 7.7e-49 197.6 161 62.1
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-48 197.2 165 58.8
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 2.9e-48 195.7 168 60.7
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 2.9e-48 195.7 154 63.6
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 3.8e-48 195.3 155 60.0
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 8.5e-48 194.1 165 58.2
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 1.4e-47 193.4 163 57.1
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 2.5e-47 192.6 157 61.8
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 1.0e-45 187.2 225 48.0
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 1.0e-45 187.2 149 61.1
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 2.3e-45 186.0 200 51.5
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 8.8e-45 184.1 143 62.9
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 2.2e-43 179.5 150 60.7
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 6.3e-43 177.9 139 66.2
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 8.2e-43 177.6 134 67.9
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 4.1e-42 175.3 134 65.7
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 7.0e-42 174.5 162 56.2
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 2.0e-41 172.9 132 63.6
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 7.7e-41 171.0 147 57.1
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 1.0e-40 170.6 147 60.5
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 1.0e-40 170.6 174 54.6
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 3.8e-40 168.7 147 55.8
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 5.0e-40 168.3 134 60.4
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 1.1e-39 167.2 144 59.7
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.9e-39 166.4 135 63.0
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 4.7e-38 161.8 132 64.4
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.2e-35 152.9 109 64.2
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 2.8e-35 152.5 146 58.9
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 4.5e-33 145.2 91 73.6
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 7.7e-33 144.4 137 54.0
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 1.0e-32 144.1 127 63.0
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 7.2e-31 137.9 103 67.0
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 5.2e-29 131.7 109 59.6
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 2.6e-28 129.4 110 60.9
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.1e-26 124.0 83 67.5
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 9.1e-26 120.9 131 47.3
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 1.0e-24 117.5 134 53.0
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 1.9e-23 113.2 116 49.1
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 2.5e-23 112.8 115 54.8
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 6.1e-22 108.2 66 71.2
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 3.0e-21 105.9 75 65.3
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 2.0e-17 93.2 55 72.7
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.1e-15 87.4 84 54.8
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.5e-15 86.3 54 72.2
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 7.3e-15 84.7 53 71.7
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 7.3e-15 84.7 58 69.0
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.2e-12 77.4 73 61.6
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.2e-12 77.4 73 61.6
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 4.9e-11 72.0 81 38.3
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 5.4e-10 68.6 48 62.5


User provided reference genes

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