Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 1.2e-112 409.8 203 100.0
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 2.2e-82 309.3 204 73.5
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 1.4e-81 306.6 206 77.2
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 5.4e-81 304.7 204 75.0
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 1.0e-79 300.4 203 72.9
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 1.7e-79 299.7 205 72.7
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 2.3e-79 299.3 205 73.2
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 6.2e-77 291.2 204 70.6
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 6.8e-76 287.7 165 84.8
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.2e-75 287.0 192 73.4
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 2.9e-74 282.3 204 70.6
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.9e-73 279.6 206 68.4
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 7.1e-73 277.7 202 68.3
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 6.8e-68 261.2 204 63.2
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 2.2e-66 256.1 203 64.0
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 6.4e-66 254.6 205 62.9
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 1.1e-65 253.8 208 62.0
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 4.1e-65 251.9 200 64.0
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 1.2e-64 250.4 206 60.2
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 1.6e-64 250.0 198 60.1
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 3.5e-64 248.8 208 59.6
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 7.8e-64 247.7 209 60.3
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.0e-63 247.3 210 60.5
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 3.0e-63 245.7 209 59.3
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 3.9e-63 245.4 201 60.7
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 5.1e-63 245.0 208 57.7
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 6.6e-63 244.6 200 61.5
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.9e-62 243.0 177 65.5
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 3.3e-62 242.3 210 60.0
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 3.3e-62 242.3 205 60.5
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 1.6e-61 240.0 200 60.5
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 2.1e-61 239.6 206 59.2
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 2.8e-61 239.2 197 60.4
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 2.8e-61 239.2 204 57.8
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 4.7e-61 238.4 206 59.7
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 6.2e-61 238.0 204 60.3
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 6.2e-61 238.0 209 58.9
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.4e-60 236.1 207 58.9
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 6.8e-60 234.6 207 59.4
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.5e-59 233.4 206 59.7
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.0e-59 233.0 207 58.9
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 2.0e-59 233.0 198 59.1
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 3.4e-59 232.3 217 57.6
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 3.4e-59 232.3 198 58.1
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 4.4e-59 231.9 200 60.0
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 4.4e-59 231.9 182 62.6
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 4.4e-59 231.9 201 58.7
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 5.8e-59 231.5 174 64.9
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 7.6e-59 231.1 182 62.1
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 9.9e-59 230.7 193 62.2
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 9.9e-59 230.7 207 58.5
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 1.7e-58 229.9 210 57.1
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.7e-58 229.9 183 63.9
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 2.2e-58 229.6 228 54.8
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 2.2e-58 229.6 181 63.5
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 2.2e-58 229.6 195 57.9
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 2.2e-58 229.6 175 61.7
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 6.4e-58 228.0 176 61.9
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.4e-57 226.9 200 58.0
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.4e-57 226.9 200 57.5
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.4e-57 226.9 209 57.9
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 9.3e-57 224.2 204 55.9
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.2e-56 223.8 203 57.1
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.6e-56 223.4 187 58.8
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 3.5e-56 222.2 198 58.1
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 4.6e-56 221.9 187 58.3
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 6.0e-56 221.5 177 58.8
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 7.8e-56 221.1 169 61.5
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 7.8e-56 221.1 175 64.0
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.7e-55 219.9 210 57.1
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 1.7e-55 219.9 181 60.2
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 1.7e-55 219.9 234 52.6
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.7e-55 219.9 169 62.1
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 2.3e-55 219.5 206 56.3
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 3.9e-55 218.8 184 58.2
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 6.6e-55 218.0 194 58.8
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 2.5e-54 216.1 174 63.2
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 4.3e-54 215.3 210 56.2
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 5.6e-54 214.9 173 62.4
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 7.3e-54 214.5 173 60.1
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 2.8e-53 212.6 178 56.2
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 3.6e-53 212.2 170 62.4
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 3.6e-53 212.2 194 56.2
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 3.6e-53 212.2 194 56.2
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 3.6e-53 212.2 194 56.2
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 4.8e-53 211.8 194 55.7
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 6.2e-53 211.5 216 53.7
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 2.4e-52 209.5 194 55.2
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 3.1e-52 209.1 173 60.1
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 6.9e-52 208.0 192 57.3
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 3.4e-51 205.7 199 55.3
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 5.8e-51 204.9 183 56.8
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 5.8e-51 204.9 228 47.8
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 8.4e-50 201.1 164 61.0
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.4e-49 199.5 202 49.5
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 3.2e-49 199.1 212 49.1
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 2.1e-48 196.4 201 53.7
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 3.5e-48 195.7 145 63.4
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 7.9e-48 194.5 203 52.2
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.3e-47 193.7 183 52.5
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 6.9e-44 181.4 202 49.5
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 4.9e-42 175.3 178 52.8
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 5.1e-39 165.2 119 68.9
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 4.5e-35 152.1 192 44.3
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 4.2e-33 145.6 212 39.2
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 4.6e-32 142.1 175 44.6
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 1.0e-31 141.0 172 44.2
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 1.3e-31 140.6 237 39.7
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 1.3e-31 140.6 184 44.6
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 2.8e-29 132.9 161 46.0
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.3e-23 114.0 197 33.0
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 3.9e-23 112.5 100 56.0
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 4.3e-22 109.0 204 33.3
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 4.8e-21 105.5 89 60.7
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 2.4e-20 103.2 183 33.3
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 1.9e-17 93.6 97 54.6
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 1.9e-17 93.6 198 29.3
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 4.2e-17 92.4 131 38.2
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 9.7e-14 81.3 100 44.0
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.5e-11 73.9 172 29.1
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 2.6e-06 56.6 105 31.4


User provided reference genes

Program Settings