Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 2.3e-145 518.8 254 100.0
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 4.8e-87 325.1 490 43.9
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 4.1e-86 322.0 476 44.3
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 3.6e-82 308.9 490 40.6
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 9.7e-80 300.8 483 42.2
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 8.2e-79 297.7 481 40.3
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 1.5e-75 287.0 489 38.2
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 4.7e-74 282.0 489 37.6
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 6.8e-73 278.1 489 37.8
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 2.6e-72 276.2 482 38.4
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 5.7e-72 275.0 489 37.6
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 2.0e-69 266.5 473 38.5
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 3.5e-69 265.8 426 38.5
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 3.1e-62 242.7 483 34.2
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 5.4e-62 241.9 487 34.5
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 2.7e-61 239.6 483 33.7
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 7.7e-61 238.0 484 33.3
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 1.0e-60 237.7 433 35.3
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 2.9e-60 236.1 485 33.8
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 5.0e-60 235.3 482 34.6
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 2.5e-59 233.0 478 34.9
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 5.6e-59 231.9 483 32.5
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 9.5e-59 231.1 519 32.4
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 9.5e-59 231.1 483 32.5
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 1.2e-58 230.7 468 33.3
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 2.1e-58 229.9 133 79.7
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 1.4e-57 227.3 485 33.8
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 8.9e-57 224.6 489 33.3
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 2.0e-56 223.4 485 33.4
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 5.7e-56 221.9 447 34.2
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 9.8e-56 221.1 476 33.0
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 2.2e-55 219.9 486 32.7
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 4.9e-55 218.8 485 32.4
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 6.4e-55 218.4 480 31.5
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 1.8e-54 216.9 483 32.1
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.4e-54 216.5 492 31.7
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 3.2e-54 216.1 487 31.4
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 4.1e-54 215.7 483 32.1
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 9.2e-54 214.5 486 31.7
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 1.2e-53 214.2 483 31.7
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 2.0e-53 213.4 454 32.8
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 5.9e-53 211.8 338 37.6
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 5.0e-52 208.8 484 31.8
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.5e-51 207.2 481 31.4
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 1.5e-51 207.2 489 31.5
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 1.9e-51 206.8 479 31.1
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 1.2e-50 204.1 482 30.5
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 2.1e-50 203.4 483 31.3
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 2.8e-50 203.0 485 31.5
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 4.7e-50 202.2 519 30.1
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 6.2e-50 201.8 473 31.5
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 8.0e-50 201.4 482 31.3
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 1.0e-49 201.1 483 30.0
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 1.4e-49 200.7 478 31.2
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 1.4e-49 200.7 487 31.2
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 1.8e-49 200.3 481 30.1
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 1.8e-49 200.3 485 31.8
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 5.2e-49 198.7 478 30.1
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 1.5e-48 197.2 492 29.5
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 2.6e-48 196.4 491 30.3
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 3.4e-48 196.1 478 30.3
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 9.8e-48 194.5 481 30.4
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 1.3e-47 194.1 126 67.5
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 3.7e-47 192.6 548 28.6
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 4.9e-47 192.2 126 68.3
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 4.9e-47 192.2 478 30.1
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 6.4e-47 191.8 128 66.4
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 1.4e-46 190.7 126 68.3
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 2.4e-46 189.9 478 29.7
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 2.4e-46 189.9 128 67.2
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 9.2e-46 188.0 499 29.3
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 2.7e-45 186.4 481 29.1
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 2.7e-45 186.4 462 30.3
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 3.5e-45 186.0 537 28.1
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 6.0e-45 185.3 121 66.9
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 1.0e-44 184.5 125 66.4
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.3e-44 184.1 490 29.0
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 2.3e-44 183.3 482 28.4
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 6.6e-44 181.8 490 29.2
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 1.1e-43 181.0 490 29.2
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 1.5e-43 180.6 490 29.0
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 1.6e-42 177.2 125 65.6
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 2.1e-42 176.8 123 63.4
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 2.8e-42 176.4 464 30.2
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 2.8e-42 176.4 101 88.1
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 2.8e-42 176.4 101 88.1
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 6.2e-42 175.3 126 64.3
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 1.1e-41 174.5 478 28.9
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 8.9e-41 171.4 479 29.2
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 8.9e-41 171.4 120 65.0
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.3e-39 167.5 426 29.3
CAN.G256.23 Capsicum annuum HOM05D005198 ORTHO05D006839 3.7e-39 166.0 126 59.5
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 2.7e-37 159.8 481 28.1
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 6.0e-37 158.7 96 85.4
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 1.7e-36 157.1 127 59.8
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 3.0e-36 156.4 127 59.1
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 1.5e-35 154.1 101 75.2
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 5.6e-35 152.1 125 56.8
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 7.3e-35 151.8 497 25.8
CSS0015120 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 4.7e-34 149.1 102 70.6
SHI30330 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-33 147.9 126 53.2
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 2.3e-33 146.7 479 25.3
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 6.8e-33 145.2 101 71.3
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 3.4e-32 142.9 126 51.6
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 9.9e-32 141.4 118 52.5
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 2.4e-30 136.7 96 65.6
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 4.1e-30 136.0 432 28.0
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.1e-30 136.0 118 60.2
SEGI_27162 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 5.4e-30 135.6 128 49.2
BolC3t18675H Brassica oleracea HOM05D005198 ORTHO05D006839 2.3e-28 130.2 128 50.8
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 3.0e-28 129.8 419 27.2
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 8.6e-28 128.3 96 71.9
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 6.2e-26 122.1 166 41.0
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 3.4e-24 116.3 127 45.7
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 1.1e-22 111.3 96 57.3
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.4e-22 110.9 103 62.1
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 1.7e-20 104.0 181 36.5
Glyma.03G132500 Glycine max HOM05D005198 ORTHO05D006839 2.5e-19 100.1 74 62.2
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 7.3e-19 98.6 100 55.0
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 4.5e-16 89.4 178 32.0
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 3.8e-15 86.3 126 35.7
Dinv33202 Davidia involucrata HOM05D005198 ORTHO05D006839 4.2e-14 82.8 48 77.1
Medtr2g088350 Medicago truncatula HOM05D000088 ORTHO05D000830 3.5e-13 79.7 84 56.0
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 1.8e-12 77.4 110 40.9
BolC2t09126H Brassica oleracea HOM05D005198 ORTHO05D042013 2.3e-12 77.0 64 54.7
C02p30710 Brassica napus HOM05D005198 ORTHO05D042013 5.1e-12 75.9 64 53.1
Os02g0606100 Oryza sativa ssp. japonica HOM05D005198 ORTHO05D006839 2.8e-10 70.1 78 52.6
Psat1g217120 Pisum sativum HOM05D005198 ORTHO05D006839 2.9e-07 60.1 38 68.4
BraA02t06891Z Brassica rapa HOM05D005198 ORTHO05D040308 5.5e-06 55.8 56 50.0


User provided reference genes

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