Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 2.7e-83 312.0 165 100.0
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 1.0e-74 283.5 164 84.1
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 1.6e-70 269.6 140 92.1
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 5.9e-70 267.7 138 92.0
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 5.0e-69 264.6 140 90.0
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 9.5e-68 260.4 142 88.7
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 1.6e-67 259.6 140 87.1
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 2.1e-67 259.2 164 79.3
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 3.0e-66 255.4 138 88.4
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 1.3e-64 250.0 141 82.3
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 1.3e-64 250.0 141 82.3
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 8.3e-64 247.3 140 80.0
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 1.4e-63 246.5 142 80.3
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 1.8e-63 246.1 134 82.8
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 1.8e-63 246.1 139 81.3
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 2.4e-63 245.7 136 83.1
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 3.2e-63 245.4 138 80.4
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 3.2e-63 245.4 133 82.7
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 3.2e-63 245.4 141 77.3
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 4.1e-63 245.0 134 82.1
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 5.4e-63 244.6 135 83.0
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 7.0e-63 244.2 134 81.3
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 9.2e-63 243.8 133 82.7
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 9.2e-63 243.8 135 83.0
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.6e-62 243.0 136 82.4
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 1.6e-62 243.0 131 82.4
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 2.7e-62 242.3 141 76.6
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 2.7e-62 242.3 134 82.1
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 2.7e-62 242.3 136 82.4
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.7e-62 242.3 136 82.4
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 2.7e-62 242.3 142 80.3
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 3.5e-62 241.9 140 77.9
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 3.5e-62 241.9 135 80.7
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 3.5e-62 241.9 134 80.6
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 3.5e-62 241.9 134 80.6
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 3.5e-62 241.9 133 82.0
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 3.5e-62 241.9 141 77.3
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 4.6e-62 241.5 133 82.0
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 7.8e-62 240.7 141 78.0
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 1.0e-61 240.4 141 76.6
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 1.3e-61 240.0 131 81.7
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 3.0e-61 238.8 133 80.5
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 3.0e-61 238.8 133 80.5
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 5.0e-61 238.0 131 83.2
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 6.6e-61 237.7 141 77.3
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 6.6e-61 237.7 141 75.2
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 6.6e-61 237.7 141 77.3
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 8.6e-61 237.3 137 78.1
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 8.6e-61 237.3 135 80.7
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 8.6e-61 237.3 133 81.2
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 1.1e-60 236.9 141 75.2
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 1.1e-60 236.9 141 75.2
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 1.1e-60 236.9 137 78.8
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 1.1e-60 236.9 137 78.8
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.1e-60 236.9 135 80.7
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 1.5e-60 236.5 133 81.2
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 1.5e-60 236.5 141 74.5
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 1.9e-60 236.1 134 79.9
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 1.9e-60 236.1 135 80.7
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 1.9e-60 236.1 135 80.7
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 1.9e-60 236.1 135 80.7
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 2.5e-60 235.7 142 76.1
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 2.5e-60 235.7 134 78.4
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 2.5e-60 235.7 134 78.4
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 2.5e-60 235.7 134 78.4
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 2.5e-60 235.7 134 78.4
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 2.5e-60 235.7 134 78.4
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 2.5e-60 235.7 141 73.8
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 4.3e-60 235.0 141 76.6
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 5.6e-60 234.6 141 73.8
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 5.6e-60 234.6 164 67.1
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 5.6e-60 234.6 132 78.8
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 5.6e-60 234.6 141 75.9
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 7.3e-60 234.2 141 74.5
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 7.3e-60 234.2 134 77.6
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 9.5e-60 233.8 133 80.5
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 1.2e-59 233.4 134 77.6
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 2.1e-59 232.6 141 78.0
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 2.8e-59 232.3 141 74.5
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.8e-59 232.3 141 75.2
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.8e-59 232.3 141 75.2
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 1.0e-58 230.3 134 79.9
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.4e-58 229.9 146 73.3
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 1.4e-58 229.9 132 77.3
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 1.4e-58 229.9 133 76.7
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.8e-58 229.6 135 77.8
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 2.3e-58 229.2 129 79.8
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 4.0e-58 228.4 133 75.9
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 4.0e-58 228.4 133 75.2
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 8.9e-58 227.3 141 73.0
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 1.2e-57 226.9 141 72.3
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 2.0e-57 226.1 141 71.6
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 2.6e-57 225.7 141 71.6
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 2.6e-57 225.7 141 71.6
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 5.8e-57 224.6 141 71.6
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 5.8e-57 224.6 141 71.6
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 1.3e-56 223.4 135 74.8
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 2.2e-56 222.6 132 74.2
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 2.2e-56 222.6 137 77.4
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 3.7e-56 221.9 130 77.7
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 4.9e-56 221.5 141 71.6
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 1.9e-55 219.5 140 70.7
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.9e-55 219.5 188 60.1
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.9e-55 219.5 183 60.7
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 2.4e-55 219.2 141 69.5
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.2e-54 216.9 183 60.7
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 1.0e-53 213.8 141 68.1
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 1.7e-53 213.0 132 71.2
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 1.1e-52 210.3 169 59.8
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 3.3e-52 208.8 136 69.9
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 6.2e-51 204.5 116 81.9
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 2.3e-50 202.6 127 72.4
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 3.2e-47 192.2 97 91.8
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 1.0e-45 187.2 145 64.1
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 5.2e-42 174.9 99 81.8
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 6.8e-42 174.5 134 57.5
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 2.6e-41 172.6 128 60.2
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 2.2e-40 169.5 134 60.4
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.1e-31 140.6 79 78.5
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 3.2e-23 112.5 83 62.7
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.3e-21 107.1 68 70.6
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 9.3e-15 84.3 76 53.9
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 1.2e-14 84.0 139 36.0
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 4.3e-12 75.5 107 36.4
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 1.6e-06 57.0 41 61.0


User provided reference genes

Program Settings