Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 1.0e-151 540.0 279 100.0
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 8.1e-112 407.5 284 77.1
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 9.0e-111 404.1 284 78.2
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 2.0e-102 376.3 272 77.9
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 7.6e-86 321.2 285 65.6
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 9.3e-84 314.3 280 65.4
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.3e-82 310.5 279 62.4
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 3.7e-80 302.4 280 61.8
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 8.2e-80 301.2 279 61.3
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 5.9e-78 295.0 285 62.1
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 6.1e-75 285.0 282 61.7
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 4.1e-71 272.3 287 61.0
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 1.5e-70 270.4 286 58.0
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 1.5e-70 270.4 286 58.0
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 3.5e-62 242.7 291 51.2
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 5.0e-61 238.8 286 51.4
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 1.9e-60 236.9 285 54.0
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 2.5e-60 236.5 281 51.2
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 4.2e-60 235.7 284 51.1
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 5.5e-60 235.3 284 51.8
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.6e-59 233.8 284 50.7
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 2.7e-59 233.0 286 51.7
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 1.2e-57 227.6 285 49.8
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 3.7e-56 222.6 295 48.8
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 1.8e-55 220.3 290 48.6
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 9.1e-55 218.0 281 48.8
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 2.7e-54 216.5 300 50.0
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 3.5e-54 216.1 283 48.1
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 2.9e-53 213.0 280 46.1
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 3.8e-53 212.6 291 46.7
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 1.1e-52 211.1 283 46.6
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 1.9e-52 210.3 283 46.6
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 5.5e-52 208.8 275 48.7
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 1.2e-51 207.6 271 47.2
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 8.0e-51 204.9 290 47.9
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 7.5e-49 198.4 283 45.2
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 2.2e-48 196.8 270 45.6
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 8.3e-48 194.9 288 44.4
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 1.1e-47 194.5 274 46.4
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 2.4e-47 193.4 279 41.6
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 2.4e-47 193.4 265 47.2
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 9.1e-47 191.4 277 45.1
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 1.6e-46 190.7 280 44.6
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.9e-45 186.4 275 41.1
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 3.8e-45 186.0 265 43.0
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 5.0e-45 185.7 269 42.4
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 9.5e-44 181.4 269 42.8
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 6.1e-43 178.7 272 42.6
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 8.0e-43 178.3 292 43.2
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 8.0e-43 178.3 272 43.4
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 4.0e-42 176.0 267 45.7
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 6.8e-42 175.3 271 42.4
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 3.4e-41 172.9 252 46.8
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.6e-38 164.1 237 46.0
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 2.7e-38 163.3 295 41.4
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 3.5e-38 162.9 238 46.6
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 5.9e-38 162.2 235 46.0
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 7.8e-38 161.8 252 44.8
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 3.8e-37 159.5 237 45.1
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 5.0e-37 159.1 278 38.8
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 1.9e-36 157.1 244 43.9
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.9e-36 157.1 244 43.9
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.5e-36 156.8 265 39.2
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 4.3e-36 156.0 195 52.8
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 9.5e-36 154.8 250 42.4
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.2e-35 154.5 245 43.3
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.1e-35 153.7 272 40.4
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 2.8e-35 153.3 307 38.8
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 4.7e-35 152.5 292 40.8
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 1.0e-34 151.4 259 39.8
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 1.0e-34 151.4 259 39.8
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 1.0e-34 151.4 268 39.9
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 6.8e-34 148.7 289 38.1
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 2.0e-33 147.1 193 49.2
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 3.4e-33 146.4 220 44.5
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 2.2e-32 143.7 232 40.1
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 4.9e-32 142.5 284 38.7
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 1.1e-31 141.4 241 43.6
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 4.1e-31 139.4 218 42.7
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 7.0e-31 138.7 236 42.4
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 9.2e-31 138.3 303 37.0
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 1.6e-30 137.5 303 37.0
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 2.7e-30 136.7 227 43.2
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 2.7e-30 136.7 227 43.2
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 2.7e-30 136.7 240 40.8
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 4.6e-30 136.0 241 42.3
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 5.9e-30 135.6 234 41.9
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 7.8e-30 135.2 228 42.5
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 7.8e-30 135.2 228 42.5
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 2.3e-29 133.7 232 42.7
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 5.0e-29 132.5 212 42.0
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 3.6e-27 126.3 216 44.9
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 4.7e-27 125.9 337 35.0
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 3.1e-26 123.2 191 43.5
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 6.8e-26 122.1 131 55.7
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 8.9e-26 121.7 225 40.9
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 9.8e-25 118.2 226 38.9
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 4.9e-24 115.9 215 37.2
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 4.9e-24 115.9 215 37.2
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.9e-23 114.0 215 39.1
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 7.1e-15 85.5 146 41.1
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.4e-07 61.2 83 41.0


User provided reference genes

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