Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 3.2e-57 224.9 118 100.0
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.1e-44 183.3 119 85.7
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 2.6e-43 178.7 118 81.4
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 1.1e-41 173.3 108 85.2
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 1.6e-40 169.5 118 78.8
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 3.9e-39 164.9 110 79.1
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 1.6e-37 159.5 100 83.0
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 2.1e-37 159.1 114 76.3
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.8e-37 158.7 107 76.6
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 4.7e-37 157.9 112 76.8
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 8.1e-37 157.1 99 80.8
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 8.1e-37 157.1 111 76.6
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 4.0e-36 154.8 106 77.4
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 2.0e-35 152.5 112 73.2
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 2.0e-35 152.5 112 73.2
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.6e-35 152.1 104 81.7
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 2.6e-35 152.1 100 80.0
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 4.4e-35 151.4 109 77.1
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 4.4e-35 151.4 108 76.9
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 4.4e-35 151.4 109 77.1
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 5.8e-35 151.0 94 85.1
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 9.9e-35 150.2 102 79.4
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.7e-34 149.4 114 71.9
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.7e-34 149.4 94 79.8
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 3.8e-34 148.3 108 71.3
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 3.8e-34 148.3 100 80.0
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 3.8e-34 148.3 108 72.2
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 4.9e-34 147.9 109 76.1
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 6.4e-34 147.5 108 71.3
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.1e-33 146.7 109 70.6
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 2.4e-33 145.6 112 69.6
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.4e-33 145.6 112 69.6
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.1e-33 144.8 103 72.8
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 9.2e-33 143.7 108 70.4
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.2e-32 143.3 109 75.2
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 1.2e-32 143.3 110 68.2
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 1.6e-32 142.9 111 69.4
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 1.6e-32 142.9 113 70.8
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.7e-32 142.1 108 68.5
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 2.7e-32 142.1 100 76.0
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 2.7e-32 142.1 106 72.6
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.7e-32 142.1 101 71.3
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 2.7e-32 142.1 114 66.7
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 3.5e-32 141.7 108 68.5
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 4.6e-32 141.4 102 75.5
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.3e-31 139.8 108 71.3
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 1.7e-31 139.4 99 73.7
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 3.0e-31 138.7 108 69.4
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 3.9e-31 138.3 108 67.6
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 3.9e-31 138.3 106 75.5
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 5.1e-31 137.9 107 71.0
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 8.6e-31 137.1 106 72.6
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.1e-30 136.7 106 72.6
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 3.3e-30 135.2 108 70.4
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 3.3e-30 135.2 101 71.3
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 5.6e-30 134.4 104 72.1
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 7.3e-30 134.0 112 67.0
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.2e-29 133.3 108 67.6
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 1.6e-29 132.9 107 70.1
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 2.8e-29 132.1 97 73.2
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 4.7e-29 131.3 94 69.1
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.1e-28 130.2 104 67.3
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.1e-28 130.2 101 66.3
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 1.8e-28 129.4 113 68.1
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 1.8e-28 129.4 104 68.3
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 2.4e-28 129.0 111 64.0
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 2.4e-28 129.0 104 67.3
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 2.4e-28 129.0 93 73.1
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 8.9e-28 127.1 111 60.4
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 8.9e-28 127.1 107 65.4
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 1.5e-27 126.3 94 66.0
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 2.0e-27 125.9 101 62.4
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 2.6e-27 125.6 101 67.3
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 3.4e-27 125.2 93 66.7
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 9.9e-27 123.6 101 62.4
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 1.1e-25 120.2 103 61.2
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 1.9e-25 119.4 168 48.8
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 4.2e-25 118.2 101 57.4
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 4.2e-25 118.2 92 63.0
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 4.2e-25 118.2 92 63.0
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 4.2e-25 118.2 78 79.5
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 1.6e-24 116.3 92 62.0
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.6e-24 116.3 92 62.0
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 2.3e-23 112.5 79 73.4
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 1.5e-22 109.8 70 84.3
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 1.9e-22 109.4 127 49.6
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.1e-21 105.9 106 53.8
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 3.6e-21 105.1 110 51.8
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 1.8e-20 102.8 87 67.8
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 2.4e-20 102.4 91 65.9
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 9.0e-20 100.5 113 54.0
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 1.5e-19 99.8 106 57.5
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 1.5e-19 99.8 102 53.9
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 2.6e-19 99.0 68 76.5
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 2.6e-19 99.0 81 71.6
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 5.8e-19 97.8 60 85.0
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.7e-18 96.3 80 61.2
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 1.4e-17 93.2 109 47.7
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.3e-13 80.1 108 44.4
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 1.3e-13 80.1 85 51.8
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 4.8e-13 78.2 88 47.7
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 2.4e-12 75.9 109 42.2
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.3e-10 70.1 106 45.3
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 2.5e-06 55.8 65 47.7
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 7.4e-06 54.3 57 52.6


User provided reference genes

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