Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 1.5e-250 869.0 435 100.0
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 7.2e-232 807.0 434 92.4
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 7.9e-231 803.5 435 91.7
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 1.1e-229 799.7 435 91.7
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 3.6e-223 778.1 426 89.9
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 3.0e-222 775.0 441 88.4
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 5.7e-221 770.8 441 87.8
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 3.8e-217 758.1 436 87.2
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 2.3e-214 748.8 435 86.2
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 3.7e-212 741.5 440 85.2
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 1.6e-207 726.1 439 83.1
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 1.6e-207 726.1 434 84.3
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 2.5e-192 675.6 437 78.0
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 6.8e-190 667.5 457 74.8
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 6.8e-190 667.5 443 75.8
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 2.0e-189 666.0 435 76.3
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 5.7e-189 664.5 441 75.1
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.3e-188 663.3 435 75.4
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 2.8e-188 662.1 438 76.3
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 3.7e-188 661.8 443 75.6
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 4.9e-188 661.4 443 75.8
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 3.1e-187 658.7 435 76.8
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 7.0e-187 657.5 432 75.7
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 9.2e-187 657.1 443 76.3
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 4.5e-186 654.8 438 74.4
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 4.5e-186 654.8 447 74.7
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.0e-185 653.7 437 74.4
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 1.0e-185 653.7 426 75.8
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 2.3e-185 652.5 438 74.2
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 2.9e-185 652.1 431 75.6
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 8.6e-185 650.6 435 75.6
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.1e-184 650.2 438 73.7
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 1.9e-184 649.4 429 75.5
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 4.3e-184 648.3 442 75.6
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 5.6e-184 647.9 438 74.2
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 1.2e-183 646.7 437 74.6
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 2.8e-183 645.6 430 75.6
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 4.7e-183 644.8 434 75.1
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 8.0e-183 644.0 437 73.7
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.0e-182 643.7 445 73.9
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 3.1e-182 642.1 437 75.3
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 3.1e-182 642.1 440 74.3
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 5.8e-181 637.9 422 75.4
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.3e-180 636.7 439 74.5
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.9e-180 635.6 444 73.9
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 4.1e-179 631.7 438 73.3
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.7e-178 629.0 430 74.2
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 3.5e-178 628.6 432 74.3
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 6.0e-178 627.9 442 72.2
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.7e-177 626.3 439 72.2
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 8.6e-177 624.0 437 70.3
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 7.3e-176 620.9 439 71.5
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 9.5e-176 620.5 433 74.4
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 6.2e-175 617.8 440 68.9
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 1.8e-174 616.3 444 71.4
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.3e-174 615.9 435 70.1
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 6.8e-174 614.4 437 69.3
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 2.0e-173 612.8 432 71.3
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 4.4e-173 611.7 442 71.9
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 3.7e-172 608.6 429 70.2
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 8.3e-172 607.4 458 69.4
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 1.4e-171 606.7 436 70.2
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.4e-171 606.7 428 70.1
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 7.0e-171 604.4 440 69.1
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 1.2e-170 603.6 433 70.0
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 2.1e-170 602.8 435 69.0
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 4.6e-170 601.7 442 70.8
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 7.8e-170 600.9 436 68.8
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 7.3e-168 594.3 438 67.6
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 9.5e-168 594.0 437 68.2
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.8e-166 589.7 440 67.0
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 2.3e-166 589.3 429 70.4
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.1e-166 589.0 438 68.0
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 8.9e-166 587.4 443 68.4
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.0e-165 586.3 430 68.1
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.0e-165 586.3 430 68.1
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 3.4e-165 585.5 434 67.5
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 3.4e-165 585.5 434 67.5
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 4.4e-165 585.1 438 69.4
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 7.5e-165 584.3 428 68.9
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 2.9e-164 582.4 442 67.4
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.9e-163 579.7 431 67.5
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 1.9e-163 579.7 448 65.6
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 2.7e-162 575.9 420 67.9
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.5e-160 570.1 432 67.4
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 6.8e-158 561.2 493 63.3
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 2.6e-157 559.3 448 65.6
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 1.6e-154 550.1 432 64.6
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 2.3e-153 546.2 435 65.1
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 2.3e-153 546.2 381 71.7
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 1.5e-152 543.5 439 63.6
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 1.1e-150 537.3 338 79.9
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 6.9e-150 534.6 363 73.3
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 2.0e-149 533.1 424 64.4
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 2.0e-149 533.1 425 65.4
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.2e-146 523.9 445 62.7
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 3.3e-144 515.8 458 59.8
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.8e-142 510.0 336 76.8
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.6e-138 496.9 348 72.1
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 1.2e-133 480.7 449 59.7
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 5.8e-133 478.4 359 69.4
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 2.9e-132 476.1 441 58.0
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 1.4e-131 473.8 432 58.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 5.5e-131 471.9 348 70.1
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 1.1e-126 457.6 437 52.2
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 4.5e-125 452.2 328 69.8
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 1.3e-124 450.7 427 52.0
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 3.2e-123 446.0 605 44.6
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 5.5e-123 445.3 428 50.7
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 6.7e-121 438.3 430 51.4
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 8.2e-119 431.4 291 76.3
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 7.2e-91 338.6 446 42.8
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 2.3e-89 333.6 308 53.6
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.7e-84 317.4 202 77.7
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 1.8e-81 307.4 275 61.5
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.8e-78 297.4 333 51.1
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 7.2e-75 285.4 212 66.5
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.4e-48 196.4 157 61.1
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 7.3e-43 179.1 487 29.2
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-40 169.9 205 52.2
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 1.3e-36 158.3 119 65.5
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.1e-33 148.7 102 71.6
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 1.4e-22 111.7 62 83.9
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 2.7e-21 107.5 113 45.1
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 3.7e-18 97.1 99 45.5
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 6.5e-15 86.3 91 51.6
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 1.3e-12 78.6 40 92.5
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 9.6e-11 72.4 64 50.0
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 2.1e-10 71.2 115 38.3
Medtr2g027310 Medicago truncatula HOM05D006332 ORTHO05D034078 1.0e-07 62.4 34 82.4
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 6.5e-07 59.7 37 73.0
Haze_21185 Corylus avellana HOM05D000405 ORTHO05D000712 9.3e-06 55.8 31 77.4


User provided reference genes

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