Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18497_v3 Cicer arietinum L. HOM05D048157 ORTHO05D044361 2.9e-87 325.1 155 100.0
Ca_20369_v3 Cicer arietinum L. HOM05D048157 ORTHO05D044361 9.8e-75 283.5 155 89.0
Phvul.008G122133 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 2.5e-14 82.8 90 38.9
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.3e-14 82.0 78 47.4
Phvul.007G129300 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 5.7e-14 81.6 170 32.4
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 5.7e-14 81.6 101 42.6
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 7.4e-14 81.3 95 41.1
Phvul.L003637 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 2.8e-13 79.3 89 38.2
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.8e-13 78.6 91 40.7
Phvul.007G155600 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.1e-12 77.4 73 41.1
TPR.G7855 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-12 77.0 89 42.7
Phvul.006G191400 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 3.1e-12 75.9 89 36.0
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 1.5e-11 73.6 67 52.2
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.5e-11 73.6 84 40.5
Phvul.007G143500 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 2.0e-11 73.2 89 39.3
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 2.6e-11 72.8 85 43.5
Phvul.003G117700 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 2.6e-11 72.8 89 36.0
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 3.4e-11 72.4 89 36.0
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 4.5e-11 72.0 95 43.2
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 4.5e-11 72.0 95 43.2
Lj6g0004966 Lotus japonicus HOM05D011527 ORTHO05D009491 5.9e-11 71.6 93 40.9
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 2.9e-10 69.3 178 30.9
TPR.G17919 Trifolium pratense HOM05D011527 ORTHO05D009491 5.0e-10 68.6 113 38.1
Lj6g0022193 Lotus japonicus HOM05D010643 ORTHO05D013332 1.9e-09 66.6 90 37.8
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 1.9e-09 66.6 87 36.8
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 1.9e-09 66.6 87 36.8
TPR.G35040 Trifolium pratense HOM05D011524 ORTHO05D009491 2.5e-09 66.2 111 38.7
arahy.Tifrunner.gnm1.ann1.SFEY24 Arachis hypogaea HOM05D000353 ORTHO05D000174 4.2e-09 65.5 85 36.5
TPR.G26714 Trifolium pratense HOM05D011524 ORTHO05D009491 7.2e-09 64.7 92 41.3
TPR.G30682 Trifolium pratense HOM05D000096 ORTHO05D000045 7.2e-09 64.7 90 37.8
TPR.G19823 Trifolium pratense HOM05D011527 ORTHO05D009491 3.6e-08 62.4 92 42.4
arahy.Tifrunner.gnm1.ann1.CT1CGZ Arachis hypogaea HOM05D007499 ORTHO05D009491 1.0e-07 60.8 94 34.0
arahy.Tifrunner.gnm1.ann1.GFA6QK Arachis hypogaea HOM05D007499 ORTHO05D009491 1.0e-07 60.8 94 34.0
TPR.G34472 Trifolium pratense HOM05D011524 ORTHO05D009491 1.0e-07 60.8 100 35.0
TPR.G36881 Trifolium pratense HOM05D011524 ORTHO05D009491 1.0e-07 60.8 93 36.6
arahy.Tifrunner.gnm1.ann1.H3FPA3 Arachis hypogaea HOM05D010000 ORTHO05D009491 1.4e-07 60.5 93 34.4
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.0e-07 59.3 87 32.2
TPR.G8670 Trifolium pratense HOM05D007499 ORTHO05D009491 3.9e-07 58.9 168 27.4
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 5.1e-07 58.5 87 33.3
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 5.1e-07 58.5 87 33.3
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 5.1e-07 58.5 87 33.3
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 5.1e-07 58.5 87 33.3
TPR.G20476 Trifolium pratense HOM05D011524 ORTHO05D009491 5.1e-07 58.5 100 35.0
TPR.G39727 Trifolium pratense HOM05D028938 ORTHO05D009491 5.1e-07 58.5 85 35.3
TPR.G8849 Trifolium pratense HOM05D007499 ORTHO05D009491 5.1e-07 58.5 85 37.6
Psat1g061440 Pisum sativum HOM05D005144 ORTHO05D006112 6.7e-07 58.2 76 42.1
Lj1g0004030 Lotus japonicus HOM05D000353 ORTHO05D000174 3.3e-06 55.8 91 30.8
TPR.G16855 Trifolium pratense HOM05D007499 ORTHO05D009491 3.3e-06 55.8 85 31.8
TPR.G38734 Trifolium pratense HOM05D027356 ORTHO05D009491 5.7e-06 55.1 85 34.1
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 7.4e-06 54.7 87 32.2
LjContig00357g0026360 Lotus japonicus HOM05D007499 ORTHO05D009491 7.4e-06 54.7 85 31.8
TPR.G27599 Trifolium pratense HOM05D007499 ORTHO05D009491 7.4e-06 54.7 85 34.1
TPR.G38513 Trifolium pratense HOM05D007499 ORTHO05D009491 7.4e-06 54.7 85 34.1
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 9.7e-06 54.3 134 24.6


User provided reference genes

Program Settings