Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.4e-130 469.9 298 100.0
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.7e-65 253.1 278 54.7
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.5e-58 230.7 296 51.4
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 5.7e-55 218.8 297 46.5
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.4e-48 197.6 308 44.5
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 5.2e-48 195.7 309 52.1
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.6e-47 193.4 307 52.8
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 3.1e-45 186.4 282 45.7
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 5.4e-45 185.7 290 47.9
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 7.0e-45 185.3 281 47.3
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 2.7e-44 183.3 302 43.7
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 5.0e-43 179.1 302 42.4
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 3.6e-41 172.9 228 48.2
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.5e-39 167.5 279 42.3
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 3.4e-39 166.4 279 43.0
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.7e-38 164.1 176 54.0
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.8e-38 163.3 199 53.3
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 4.9e-38 162.5 286 42.3
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 6.3e-38 162.2 275 43.3
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.4e-37 159.1 273 41.8
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.5e-34 151.0 181 50.3
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 7.3e-34 148.7 158 53.8
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 9.5e-34 148.3 268 40.7
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 1.6e-33 147.5 163 54.0
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 6.1e-33 145.6 158 53.2
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.8e-32 144.1 155 56.1
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 8.9e-32 141.7 192 50.5
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.2e-31 141.4 162 53.1
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.4e-31 139.4 173 52.0
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 8.3e-30 135.2 139 56.1
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.8e-29 134.0 187 49.2
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 3.2e-29 133.3 152 50.7
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.2e-29 133.3 152 50.7
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 3.5e-28 129.8 274 35.8
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.6e-28 129.4 192 46.4
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 7.8e-28 128.6 166 49.4
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.3e-27 127.9 120 59.2
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.3e-27 127.1 166 49.4
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.9e-27 126.3 172 46.5
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.1e-26 124.8 181 45.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.9e-26 124.0 173 45.1
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.5e-26 123.6 167 49.1
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.3e-26 123.2 274 36.1
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 3.3e-26 123.2 242 39.3
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 4.3e-26 122.9 184 45.7
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 5.6e-26 122.5 153 51.6
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 7.3e-26 122.1 143 50.3
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 7.3e-26 122.1 165 47.9
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 6.2e-25 119.0 165 46.7
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 1.4e-24 117.9 155 48.4
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.8e-24 117.5 174 45.4
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 2.3e-24 117.1 172 47.1
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 3.1e-24 116.7 130 57.7
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 8.9e-24 115.2 148 52.0
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.2e-23 114.8 152 48.0
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 2.0e-23 114.0 159 47.2
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 5.8e-23 112.5 123 51.2
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 7.5e-23 112.1 174 40.2
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.3e-22 111.3 248 37.5
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-22 110.9 117 59.8
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 2.4e-21 107.1 280 33.2
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.4e-21 107.1 133 50.4
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.4e-21 107.1 141 49.6
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 2.4e-21 107.1 143 49.7
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 2.4e-21 107.1 165 44.8
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.1e-21 106.3 117 58.1
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 5.4e-21 105.9 119 58.0
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.6e-20 104.4 171 40.9
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.7e-20 103.6 147 48.3
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.7e-20 103.6 164 45.1
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 3.5e-20 103.2 160 43.1
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.5e-20 103.2 110 54.5
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.7e-19 100.9 116 52.6
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.3e-19 100.5 163 44.8
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 3.0e-19 100.1 249 35.7
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 3.0e-19 100.1 142 44.4
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 5.0e-19 99.4 132 49.2
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 5.0e-19 99.4 137 48.9
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.0e-19 99.4 160 44.4
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.0e-19 99.4 160 44.4
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.6e-19 99.0 160 44.4
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.5e-18 97.8 116 60.3
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 9.5e-18 95.1 128 47.7
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 3.6e-17 93.2 146 47.9
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.1e-16 91.7 166 39.8
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.4e-16 91.3 117 49.6
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 5.2e-16 89.4 131 43.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 6.8e-16 89.0 173 43.9
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.5e-15 87.8 123 44.7
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.0e-15 87.4 131 46.6
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 2.0e-15 87.4 129 47.3
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.6e-15 87.0 128 45.3
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 3.4e-15 86.7 146 43.2
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 5.8e-15 85.9 119 47.1
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.8e-15 85.9 163 41.7
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.8e-15 85.9 163 41.7
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.3e-14 84.7 174 38.5
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 2.9e-14 83.6 174 38.5
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.9e-14 83.6 116 48.3
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 8.3e-14 82.0 163 36.8
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.4e-13 81.3 171 38.6
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.4e-13 80.5 146 41.8
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 3.2e-13 80.1 184 39.7
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 5.4e-13 79.3 138 42.8
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.2e-12 78.2 133 44.4
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.6e-12 77.8 119 49.6
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.6e-12 77.8 96 42.7
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.0e-12 75.9 119 49.6
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 7.8e-12 75.5 138 40.6
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 1.0e-11 75.1 135 44.4
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 2.5e-10 70.5 173 37.0
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 2.1e-09 67.4 82 46.3
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 3.6e-09 66.6 138 38.4
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 4.7e-09 66.2 128 40.6
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.1e-08 65.1 183 33.3
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 4.4e-07 59.7 161 32.9
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 5.8e-07 59.3 83 38.6
Oeu001396.1 Olea europaea HOM05D045950 ORTHO05D007888 1.3e-06 58.2 66 51.5
Oeu001394.1 Olea europaea HOM05D045950 ORTHO05D007888 3.8e-06 56.6 72 48.6


User provided reference genes

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