Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 0.0e+00 1216.4 624 100.0
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 5.4e-273 944.1 630 81.0
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 5.4e-273 944.1 631 81.9
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 9.5e-262 906.7 631 79.9
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 1.0e-247 860.1 640 74.8
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 1.9e-246 855.9 640 74.5
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 1.4e-244 849.7 641 73.9
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.5e-243 846.3 641 74.6
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 2.2e-242 842.4 649 73.2
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 5.1e-231 804.7 634 71.5
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 6.9e-212 741.1 635 66.6
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 8.0e-176 621.3 637 57.8
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 1.0e-175 620.9 640 57.3
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 2.8e-168 596.3 637 57.1
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 1.0e-167 594.3 641 56.2
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 5.7e-166 588.6 643 56.6
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 3.6e-160 569.3 647 55.0
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.4e-159 567.4 647 55.0
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 2.0e-158 563.5 654 54.4
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 2.2e-157 560.1 693 51.7
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.9e-156 557.0 643 54.3
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 4.1e-156 555.8 678 52.7
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 6.0e-155 552.0 640 53.3
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 3.9e-154 549.3 643 54.9
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 8.6e-154 548.1 642 52.3
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 2.1e-152 543.5 642 53.4
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.4e-151 540.8 651 53.5
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 6.8e-151 538.5 643 52.6
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 8.9e-151 538.1 648 53.7
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 3.4e-150 536.2 665 51.7
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 9.8e-150 534.6 655 53.3
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 4.1e-148 529.3 642 52.2
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 4.1e-148 529.3 642 52.2
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 7.8e-147 525.0 657 49.8
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 2.3e-146 523.5 642 52.6
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.8e-144 516.5 640 51.4
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 8.1e-144 515.0 643 51.8
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 5.8e-142 508.8 652 50.8
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 2.9e-141 506.5 648 50.3
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.1e-135 488.0 658 47.4
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 1.8e-135 487.3 637 49.9
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.6e-134 483.4 652 50.2
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.9e-129 467.2 647 50.1
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 2.1e-128 463.8 660 48.2
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 3.6e-128 463.0 656 47.6
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 6.9e-127 458.8 658 48.2
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 2.0e-126 457.2 662 48.2
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.3e-125 454.5 659 46.1
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.3e-125 454.5 653 46.4
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.2e-125 453.8 665 47.7
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.2e-125 453.8 636 47.5
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 8.4e-125 451.8 657 46.9
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 8.4e-125 451.8 651 47.5
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.4e-124 451.1 687 47.3
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 3.2e-124 449.9 637 49.0
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 2.5e-121 440.3 661 45.2
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 3.6e-120 436.4 551 50.1
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 9.0e-119 431.8 698 43.1
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.5e-118 431.0 659 46.1
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 1.3e-117 427.9 660 46.2
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 1.3e-117 427.9 667 46.8
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 1.4e-116 424.5 662 44.3
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 1.9e-116 424.1 666 43.2
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 9.3e-116 421.8 600 46.8
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.1e-115 420.6 669 44.4
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 7.9e-115 418.7 649 45.1
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 1.0e-114 418.3 642 46.0
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 1.0e-114 418.3 503 51.9
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 5.1e-114 416.0 659 45.4
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 7.4e-113 412.1 642 46.7
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 1.3e-112 411.4 664 44.7
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 2.1e-112 410.6 664 44.3
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 6.2e-112 409.1 445 54.2
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 1.2e-110 404.8 675 43.3
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 3.4e-110 403.3 652 43.9
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 5.8e-110 402.5 639 44.3
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 8.4e-109 398.7 633 43.4
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 3.3e-105 386.7 642 44.4
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 5.7e-105 386.0 635 44.1
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 4.1e-103 379.8 539 45.6
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 3.4e-102 376.7 653 44.1
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 2.2e-101 374.0 618 44.2
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 4.2e-100 369.8 657 42.6
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 7.2e-100 369.0 661 43.7
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 1.0e-98 365.2 645 43.4
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 1.6e-96 357.8 642 43.0
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 2.2e-96 357.5 636 41.2
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 1.4e-95 354.8 659 40.2
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.4e-95 354.0 547 43.9
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 4.1e-95 353.2 500 45.4
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 4.5e-94 349.7 484 48.3
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 6.5e-93 345.9 663 41.5
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 2.5e-92 344.0 643 42.3
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 5.5e-92 342.8 446 49.3
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 1.5e-89 334.7 657 40.8
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 2.6e-86 323.9 640 41.1
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.3e-85 321.6 713 37.4
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.3e-85 321.6 597 42.0
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 6.5e-85 319.3 627 40.5
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 6.5e-85 319.3 636 40.7
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 2.7e-83 313.9 636 39.9
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.0e-82 312.0 644 39.4
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 2.3e-82 310.8 644 41.1
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 2.3e-82 310.8 638 40.1
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 3.0e-82 310.5 638 40.3
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 6.7e-82 309.3 635 39.4
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 6.7e-82 309.3 693 38.0
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 5.7e-81 306.2 454 44.7
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 1.8e-79 301.2 635 39.7
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 2.6e-78 297.4 660 40.0
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 3.5e-78 297.0 619 38.8
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 3.8e-77 293.5 363 51.8
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 5.0e-77 293.1 643 39.2
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.5e-76 291.6 481 42.6
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 9.4e-76 288.9 517 43.3
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 2.3e-74 284.3 642 37.5
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 7.5e-73 279.3 771 34.4
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 5.5e-60 236.5 433 40.6
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.6e-59 235.0 439 40.8
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.3e-53 215.3 737 34.3
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 1.1e-52 212.2 467 38.5
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 3.2e-47 194.1 112 83.0
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 9.2e-47 192.6 623 31.6
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 5.0e-45 186.8 163 65.0
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 2.8e-43 181.0 244 49.6
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 1.0e-42 179.1 194 57.2
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 1.5e-41 175.3 648 31.8
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 2.0e-38 164.9 647 32.1
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.9e-28 131.7 722 28.8
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 1.4e-26 125.6 181 44.2
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 1.6e-19 102.1 951 24.7
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 2.0e-17 95.1 116 50.0
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 3.4e-17 94.4 994 24.6
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 5.8e-17 93.6 426 30.0
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 2.7e-14 84.7 193 37.8
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 3.9e-13 80.9 121 44.6
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 1.9e-12 78.6 121 43.8
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.6e-12 77.0 88 55.7
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 2.0e-09 68.6 262 32.1


User provided reference genes

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