Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 9.8e-58 226.5 107 100.0
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 2.1e-52 208.8 107 90.7
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 4.4e-50 201.1 107 88.8
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 2.4e-48 195.3 107 86.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.5e-45 186.0 108 82.4
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 1.9e-45 185.7 108 81.5
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 4.7e-44 181.0 108 79.6
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 5.4e-40 167.5 104 76.9
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 2.1e-39 165.6 99 73.7
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 4.6e-39 164.5 109 74.3
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 3.0e-38 161.8 107 70.1
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 5.1e-38 161.0 107 67.3
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.6e-38 160.6 107 71.0
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 6.6e-38 160.6 107 68.2
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 6.6e-38 160.6 103 70.9
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 1.5e-37 159.5 107 68.2
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 1.9e-37 159.1 103 69.9
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 2.5e-37 158.7 105 68.6
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 2.5e-37 158.7 104 67.3
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 3.3e-37 158.3 101 74.3
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 3.3e-37 158.3 107 65.4
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 3.3e-37 158.3 103 70.9
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 3.3e-37 158.3 107 68.2
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 3.3e-37 158.3 107 72.0
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 4.3e-37 157.9 106 68.9
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 1.6e-36 156.0 103 69.9
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 2.1e-36 155.6 107 63.6
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 3.6e-36 154.8 111 64.9
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.6e-36 154.8 106 67.9
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 3.6e-36 154.8 106 67.9
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 6.2e-36 154.1 107 67.3
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 8.1e-36 153.7 98 70.4
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 8.1e-36 153.7 105 66.7
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.4e-35 152.9 102 69.6
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.4e-35 152.9 106 67.0
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.8e-35 152.5 106 67.0
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.8e-35 152.5 107 66.4
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 4.0e-35 151.4 107 66.4
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 4.0e-35 151.4 107 64.5
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 4.0e-35 151.4 107 66.4
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 4.0e-35 151.4 107 66.4
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.2e-35 151.0 106 66.0
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 1.2e-34 149.8 107 65.4
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 1.2e-34 149.8 108 63.9
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.5e-34 149.4 103 62.1
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.5e-34 149.4 107 66.4
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 2.0e-34 149.1 106 60.4
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.6e-34 148.7 106 66.0
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 3.4e-34 148.3 109 64.2
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 3.4e-34 148.3 104 61.5
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 5.8e-34 147.5 103 65.0
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 7.6e-34 147.1 107 65.4
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 9.9e-34 146.7 103 67.0
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 2.2e-33 145.6 110 64.5
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 2.9e-33 145.2 107 63.6
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 2.9e-33 145.2 88 69.3
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 3.8e-33 144.8 104 65.4
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 4.9e-33 144.4 104 66.3
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 4.9e-33 144.4 107 62.6
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 6.4e-33 144.1 104 65.4
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.4e-33 143.7 106 64.2
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 8.4e-33 143.7 127 56.7
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.1e-32 143.3 100 62.0
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.1e-32 143.3 96 65.6
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.4e-32 142.9 104 62.5
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 3.2e-32 141.7 105 64.8
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 5.4e-32 141.0 88 68.2
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 7.1e-32 140.6 110 62.7
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 1.2e-31 139.8 107 62.6
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.7e-31 138.7 104 64.4
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 1.3e-30 136.3 77 77.9
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.1e-30 134.4 114 59.6
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 5.1e-30 134.4 173 41.6
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 8.7e-30 133.7 141 46.8
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.5e-29 132.9 92 63.0
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 3.3e-29 131.7 106 59.4
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 3.3e-29 131.7 106 59.4
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 5.6e-29 131.0 107 56.1
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 7.3e-29 130.6 107 56.1
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 8.1e-28 127.1 107 57.0
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 8.1e-28 127.1 107 55.1
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 8.1e-28 127.1 107 57.0
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.4e-27 126.3 85 62.4
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 1.4e-27 126.3 100 61.0
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 2.4e-27 125.6 108 54.6
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 3.1e-27 125.2 107 53.3
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 3.1e-27 125.2 107 56.1
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 4.0e-27 124.8 94 59.6
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 6.9e-27 124.0 107 53.3
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 2.0e-26 122.5 107 55.1
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 2.0e-26 122.5 78 70.5
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 5.8e-26 120.9 92 52.2
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.3e-25 119.8 78 66.7
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 3.8e-25 118.2 106 52.8
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 3.8e-25 118.2 107 51.4
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 6.4e-25 117.5 102 49.0
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 8.4e-25 117.1 129 45.7
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 1.9e-24 115.9 126 47.6
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.9e-24 115.9 78 62.8
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 2.4e-24 115.5 124 48.4
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.4e-24 115.5 78 64.1
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 3.2e-24 115.2 74 67.6
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 5.4e-24 114.4 124 47.6
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 7.1e-24 114.0 98 48.0
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 7.1e-24 114.0 124 47.6
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 7.1e-24 114.0 124 47.6
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 2.7e-23 112.1 124 45.2
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 3.5e-23 111.7 70 68.6
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.6e-23 111.3 97 54.6
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 7.9e-23 110.5 73 64.4
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.8e-22 109.4 71 71.8
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.3e-22 109.0 69 65.2
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 6.7e-22 107.5 74 64.9
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 8.7e-22 107.1 71 67.6
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 1.3e-20 103.2 78 66.7
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 6.2e-20 100.9 69 62.3
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 6.2e-20 100.9 73 58.9
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.4e-19 99.8 73 64.4
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 4.2e-16 88.2 78 51.3
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 9.3e-16 87.0 51 76.5
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 1.2e-15 86.7 74 55.4
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 3.0e-14 82.0 124 38.7
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 8.7e-14 80.5 83 41.0
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 1.8e-11 72.8 40 72.5
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 5.3e-11 71.2 53 56.6
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 1.3e-09 66.6 96 33.3
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 8.7e-06 53.9 40 57.5


User provided reference genes

Program Settings