Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 2.0e-46 188.7 94 100.0
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 6.4e-29 130.6 79 74.7
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 1.1e-23 113.2 83 68.7
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 1.4e-23 112.8 83 68.7
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 1.8e-23 112.5 98 62.2
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 2.4e-23 112.1 91 63.7
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 5.3e-23 110.9 96 62.5
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 5.3e-23 110.9 86 64.0
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 6.9e-23 110.5 83 65.1
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 6.9e-23 110.5 83 67.5
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 1.2e-22 109.8 83 67.5
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 2.0e-22 109.0 87 67.8
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 2.6e-22 108.6 89 64.0
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 3.4e-22 108.2 86 61.6
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 7.6e-22 107.1 86 59.3
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 1.3e-21 106.3 83 65.1
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 1.7e-21 105.9 86 62.8
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 4.9e-21 104.4 86 59.3
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 8.4e-21 103.6 82 58.5
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 8.4e-21 103.6 86 58.1
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 1.1e-20 103.2 94 59.6
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 1.1e-20 103.2 86 58.1
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 1.4e-20 102.8 87 63.2
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 1.4e-20 102.8 87 63.2
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 1.4e-20 102.8 86 57.0
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 1.9e-20 102.4 86 60.5
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 2.5e-20 102.1 73 63.0
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 3.2e-20 101.7 73 63.0
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 3.2e-20 101.7 88 63.6
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 9.3e-20 100.1 94 60.6
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 9.3e-20 100.1 83 60.2
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 9.3e-20 100.1 89 60.7
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 1.2e-19 99.8 87 57.5
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 1.2e-19 99.8 86 59.3
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 1.2e-19 99.8 93 59.1
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 1.2e-19 99.8 81 56.8
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 1.2e-19 99.8 86 55.8
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 1.6e-19 99.4 86 55.8
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 1.6e-19 99.4 86 54.7
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 2.1e-19 99.0 93 54.8
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 2.7e-19 98.6 86 59.3
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.5e-19 98.2 86 54.7
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 3.5e-19 98.2 94 53.2
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 4.6e-19 97.8 83 56.6
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 6.0e-19 97.4 86 53.5
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 6.0e-19 97.4 86 53.5
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.0e-18 96.7 86 53.5
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.0e-18 96.7 86 53.5
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.0e-18 96.7 83 55.4
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.3e-18 96.3 84 53.6
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.3e-18 96.3 83 55.4
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.3e-18 96.3 83 55.4
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 1.8e-18 95.9 75 61.3
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 2.3e-18 95.5 86 58.1
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 2.3e-18 95.5 87 56.3
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 3.0e-18 95.1 86 57.0
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 3.9e-18 94.7 83 57.8
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 3.9e-18 94.7 83 57.8
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 3.9e-18 94.7 92 55.4
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 6.7e-18 94.0 87 54.0
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 6.7e-18 94.0 83 57.8
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 6.7e-18 94.0 83 57.8
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 6.7e-18 94.0 83 51.8
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 1.1e-17 93.2 96 52.1
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 2.5e-17 92.0 95 57.9
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 3.3e-17 91.7 86 52.3
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 3.3e-17 91.7 99 51.5
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 9.7e-17 90.1 72 65.3
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 9.7e-17 90.1 72 65.3
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 9.7e-17 90.1 86 51.2
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 1.3e-16 89.7 71 59.2
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 3.7e-16 88.2 93 49.5
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 6.3e-16 87.4 85 52.9
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 8.2e-16 87.0 93 52.7
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 1.1e-15 86.7 86 53.5
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 1.1e-15 86.7 87 54.0
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 1.4e-15 86.3 76 53.9
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 1.4e-15 86.3 83 55.4
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 1.8e-15 85.9 77 57.1
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 1.8e-15 85.9 93 50.5
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 5.3e-15 84.3 77 57.1
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 6.9e-15 84.0 93 48.4
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 6.9e-15 84.0 89 51.7
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 6.9e-15 84.0 75 56.0
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 1.2e-14 83.2 102 44.1
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 1.5e-14 82.8 75 56.0
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 2.0e-14 82.4 75 56.0
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 2.6e-14 82.0 76 50.0
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 2.6e-14 82.0 74 55.4
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 3.4e-14 81.6 92 47.8
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 3.4e-14 81.6 92 51.1
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 5.9e-14 80.9 73 58.9
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 5.9e-14 80.9 76 55.3
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 5.9e-14 80.9 76 55.3
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 5.9e-14 80.9 74 54.1
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 7.7e-14 80.5 82 52.4
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 1.0e-13 80.1 95 46.3
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 1.0e-13 80.1 75 54.7
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 1.3e-13 79.7 90 50.0
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.3e-13 79.7 62 56.5
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 1.7e-13 79.3 75 56.0
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 2.9e-13 78.6 84 50.0
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 2.9e-13 78.6 93 48.4
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 3.8e-13 78.2 83 47.0
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 3.8e-13 78.2 73 60.3
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 6.5e-13 77.4 92 41.3
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 6.5e-13 77.4 72 56.9
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 6.5e-13 77.4 93 48.4
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 8.5e-13 77.0 70 55.7
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 1.1e-12 76.6 90 46.7
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 1.1e-12 76.6 93 47.3
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 1.4e-12 76.3 59 59.3
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.4e-12 76.3 92 48.9
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.9e-12 75.9 84 47.6
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 1.9e-12 75.9 82 48.8
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 2.5e-12 75.5 84 46.4
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 2.5e-12 75.5 93 45.2
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 2.5e-12 75.5 76 47.4
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 2.5e-12 75.5 96 44.8
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 3.2e-12 75.1 96 43.8
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 4.2e-12 74.7 84 50.0
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 4.2e-12 74.7 72 50.0
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 5.5e-12 74.3 79 46.8
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 5.5e-12 74.3 71 54.9
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 5.5e-12 74.3 83 47.0
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 7.2e-12 73.9 95 47.4
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 1.2e-11 73.2 92 40.2
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 1.2e-11 73.2 70 52.9
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 1.2e-11 73.2 85 48.2
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 1.2e-11 73.2 82 51.2
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 1.2e-11 73.2 82 51.2
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 1.2e-11 73.2 82 51.2
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 1.2e-11 73.2 81 50.6
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 1.2e-11 73.2 95 41.1
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 1.2e-11 73.2 95 43.2
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 2.1e-11 72.4 85 47.1
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 2.1e-11 72.4 85 47.1
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 2.1e-11 72.4 77 48.1
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 2.1e-11 72.4 79 46.8
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 2.7e-11 72.0 89 50.6
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 3.6e-11 71.6 84 44.0
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 3.6e-11 71.6 84 47.6
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 3.6e-11 71.6 84 45.2
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 4.6e-11 71.2 84 44.0
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 4.6e-11 71.2 97 42.3
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 6.1e-11 70.9 94 40.4
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 6.1e-11 70.9 84 45.2
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 7.9e-11 70.5 79 48.1
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 7.9e-11 70.5 79 48.1
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 7.9e-11 70.5 79 48.1
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 1.0e-10 70.1 80 45.0
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 1.0e-10 70.1 84 47.6
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.0e-10 70.1 80 45.0
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 1.4e-10 69.7 81 46.9
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 1.4e-10 69.7 89 47.2
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 1.4e-10 69.7 89 47.2
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 1.8e-10 69.3 89 47.2
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 1.8e-10 69.3 79 48.1
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 1.8e-10 69.3 89 47.2
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.8e-10 69.3 89 47.2
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 1.8e-10 69.3 79 48.1
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 1.8e-10 69.3 84 46.4
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 1.8e-10 69.3 84 41.7
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 3.0e-10 68.6 80 45.0
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 3.0e-10 68.6 80 45.0
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 3.9e-10 68.2 86 44.2
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 6.7e-10 67.4 84 46.4
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 6.7e-10 67.4 75 46.7
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 8.8e-10 67.0 80 43.8
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 8.8e-10 67.0 78 44.9
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 1.1e-09 66.6 84 46.4
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 1.5e-09 66.2 58 53.4
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 9.7e-09 63.5 65 52.3
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 1.3e-08 63.2 89 43.8
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 1.7e-08 62.8 75 49.3
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 2.2e-08 62.4 78 46.2
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 2.2e-08 62.4 76 48.7
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 2.2e-08 62.4 76 48.7
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 2.2e-08 62.4 83 41.0
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 2.8e-08 62.0 76 48.7
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 4.8e-08 61.2 51 52.9
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 6.3e-08 60.8 52 55.8
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 6.3e-08 60.8 52 55.8
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 1.4e-07 59.7 59 50.8
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 1.8e-07 59.3 69 44.9
Nitab4.5_0002302g0110 Nicotiana tabacum HOM05D003613 ORTHO05D004055 7.7e-06 53.9 47 61.7


User provided reference genes

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