Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 3.9e-55 218.4 154 100.0
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 3.9e-47 191.8 147 73.5
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.5e-46 189.9 146 73.3
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 6.8e-44 181.0 152 67.1
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 2.6e-43 179.1 150 67.3
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 4.4e-43 178.3 154 65.6
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 4.4e-43 178.3 154 65.6
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 5.8e-43 177.9 152 67.1
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.3e-42 176.8 153 64.1
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 6.4e-42 174.5 150 66.7
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 3.5e-40 168.7 153 71.9
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 3.5e-40 168.7 150 65.3
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 6.0e-40 167.9 152 78.3
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.3e-39 166.8 152 63.8
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.3e-39 166.8 156 62.2
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 3.9e-39 165.2 152 63.8
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 5.1e-39 164.9 145 64.8
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 8.6e-39 164.1 148 79.7
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 8.6e-39 164.1 148 75.7
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 8.6e-39 164.1 156 62.2
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 2.5e-38 162.5 147 63.9
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 2.5e-38 162.5 151 62.3
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 4.3e-38 161.8 153 61.4
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 5.6e-38 161.4 155 61.3
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 5.6e-38 161.4 153 62.1
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 9.5e-38 160.6 152 61.8
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 9.5e-38 160.6 150 60.7
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.2e-37 160.2 152 61.8
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.6e-37 159.8 150 60.0
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.6e-37 159.8 150 60.0
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.1e-37 159.5 145 62.8
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 2.1e-37 159.5 151 60.9
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 2.1e-37 159.5 150 62.0
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 2.8e-37 159.1 154 58.4
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 2.8e-37 159.1 150 61.3
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 2.8e-37 159.1 155 60.0
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 2.8e-37 159.1 148 61.5
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 2.8e-37 159.1 150 58.0
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 3.6e-37 158.7 152 61.2
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 3.6e-37 158.7 154 57.1
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 3.6e-37 158.7 154 57.1
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 3.6e-37 158.7 154 60.4
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 3.6e-37 158.7 154 57.8
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 3.6e-37 158.7 149 76.5
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 4.7e-37 158.3 156 60.3
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 4.7e-37 158.3 144 63.2
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 6.2e-37 157.9 148 62.2
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 8.1e-37 157.5 153 61.4
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.1e-36 157.1 142 60.6
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 1.1e-36 157.1 154 57.8
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 1.4e-36 156.8 154 57.1
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.4e-36 156.8 149 61.1
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.4e-36 156.8 149 61.1
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.4e-36 156.8 149 61.1
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 1.4e-36 156.8 148 62.2
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 1.8e-36 156.4 154 56.5
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 1.8e-36 156.4 154 57.1
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 1.8e-36 156.4 154 57.1
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.8e-36 156.4 154 56.5
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.8e-36 156.4 154 57.1
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.8e-36 156.4 148 59.5
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 1.8e-36 156.4 153 60.1
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.8e-36 156.4 148 60.8
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 1.8e-36 156.4 154 57.1
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 1.8e-36 156.4 151 58.3
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.3e-36 156.0 148 60.8
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 4.0e-36 155.2 149 60.4
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 4.0e-36 155.2 148 59.5
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.0e-36 155.2 149 60.4
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.0e-36 155.2 149 60.4
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 4.0e-36 155.2 150 60.0
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.5e-35 153.3 148 60.8
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 2.0e-35 152.9 154 55.8
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.0e-35 152.9 149 59.7
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 2.6e-35 152.5 146 59.6
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 4.4e-35 151.8 174 55.2
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 7.6e-35 151.0 151 56.3
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 7.6e-35 151.0 154 55.8
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 7.6e-35 151.0 151 56.3
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 7.6e-35 151.0 157 73.9
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 1.3e-34 150.2 149 56.4
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 2.9e-34 149.1 149 57.0
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.9e-34 149.1 147 57.1
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 3.7e-34 148.7 150 59.3
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 4.9e-34 148.3 154 59.1
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 6.4e-34 147.9 147 74.8
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 6.4e-34 147.9 146 58.2
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 6.4e-34 147.9 146 58.2
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 6.4e-34 147.9 149 57.7
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 4.1e-33 145.2 143 56.6
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 1.6e-32 143.3 148 55.4
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 1.0e-31 140.6 145 53.8
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.3e-31 140.2 158 71.5
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.3e-31 140.2 97 78.4
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.0e-31 139.0 157 70.7
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 3.0e-31 139.0 146 54.8
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.9e-31 138.7 145 54.5
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 1.1e-30 137.1 97 77.3
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.1e-30 137.1 131 59.5
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 1.1e-30 137.1 154 55.8
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 7.3e-30 134.4 154 53.9
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 3.1e-28 129.0 92 73.9
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 8.9e-28 127.5 151 72.2
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 1.2e-27 127.1 90 74.4
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 2.0e-27 126.3 94 74.5
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 4.4e-27 125.2 148 53.4
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 7.6e-27 124.4 157 66.9
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 7.6e-27 124.4 157 66.9
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 7.6e-27 124.4 95 66.3
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 7.6e-27 124.4 90 73.3
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 9.9e-27 124.0 177 62.7
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 6.4e-26 121.3 97 69.1
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 8.4e-26 120.9 144 47.9
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 1.4e-25 120.2 95 69.5
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 3.9e-23 112.1 219 38.8
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 5.6e-22 108.2 126 75.4
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 2.1e-21 106.3 136 41.2
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 7.6e-19 97.8 142 43.0
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.3e-18 97.1 139 38.1
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 1.1e-17 94.0 52 88.5
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 1.6e-16 90.1 136 37.5
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 9.6e-14 80.9 92 54.3
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 4.5e-11 72.0 128 60.9
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 8.4e-10 67.8 81 51.9
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.0e-07 60.8 47 59.6


User provided reference genes

Program Settings