Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 9.4e-162 573.5 307 100.0
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 2.1e-145 519.2 308 90.3
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 9.2e-141 503.8 308 89.0
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 4.7e-137 491.5 308 87.7
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 1.5e-135 486.5 307 86.3
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 3.4e-135 485.3 308 86.7
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 1.4e-133 479.9 315 84.1
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 7.0e-133 477.6 311 84.9
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 7.8e-132 474.2 313 83.1
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 3.9e-131 471.9 311 83.9
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 1.5e-130 469.9 311 83.6
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 2.6e-127 459.1 306 82.0
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 1.7e-118 429.9 294 80.3
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 3.2e-117 425.6 302 78.8
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 7.1e-117 424.5 299 79.6
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 7.1e-117 424.5 294 79.9
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 9.2e-117 424.1 285 81.8
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 4.6e-116 421.8 305 76.4
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 6.0e-116 421.4 297 79.5
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 6.0e-116 421.4 294 79.3
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 7.8e-116 421.0 285 81.1
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 2.3e-115 419.5 306 77.1
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 3.0e-115 419.1 302 77.8
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 5.1e-115 418.3 284 79.2
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 8.6e-115 417.5 298 77.9
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.9e-114 416.4 294 78.6
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 5.6e-114 414.8 295 77.6
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 7.3e-114 414.5 292 79.8
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 9.5e-114 414.1 303 78.5
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 1.2e-113 413.7 291 80.4
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 2.8e-113 412.5 298 78.5
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 3.1e-112 409.1 309 75.7
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 4.0e-112 408.7 285 77.9
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 6.8e-112 407.9 292 79.5
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 6.8e-112 407.9 290 78.6
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 6.8e-112 407.9 295 78.3
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 8.9e-112 407.5 291 77.3
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 1.5e-111 406.8 293 78.8
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 2.0e-111 406.4 286 78.3
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 3.4e-111 405.6 301 76.4
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 9.9e-111 404.1 291 76.6
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 1.7e-110 403.3 296 77.4
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 2.2e-110 402.9 292 78.4
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 2.9e-110 402.5 296 77.4
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 2.9e-110 402.5 306 73.2
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 3.7e-110 402.1 290 78.6
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 3.7e-110 402.1 295 76.9
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 6.4e-110 401.4 299 75.6
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 1.4e-109 400.2 252 82.1
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 1.4e-109 400.2 300 74.0
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 1.9e-109 399.8 285 76.1
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 2.7e-108 396.0 303 74.3
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 6.0e-108 394.8 290 75.9
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 1.0e-107 394.0 294 75.5
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.9e-106 389.8 299 73.9
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 3.3e-106 389.0 290 75.5
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 5.6e-106 388.3 295 74.6
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 7.3e-106 387.9 298 73.5
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 3.6e-105 385.6 279 77.1
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 4.7e-105 385.2 290 73.1
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 1.4e-104 383.6 291 72.9
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 6.8e-104 381.3 300 72.7
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 2.9e-102 375.9 290 73.1
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 6.4e-102 374.8 303 70.0
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 8.4e-102 374.4 287 73.9
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 8.4e-102 374.4 292 69.2
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 4.3e-98 362.1 287 73.9
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 5.6e-98 361.7 296 71.6
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 2.8e-97 359.4 287 70.0
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 3.6e-97 359.0 247 76.9
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 1.4e-96 357.1 263 74.1
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 1.2e-95 354.0 286 69.6
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 9.9e-95 350.9 287 69.7
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 4.0e-88 328.9 290 66.9
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 2.6e-87 326.2 238 71.0
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 3.5e-84 315.8 260 63.5
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 5.1e-83 312.0 288 64.9
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 2.5e-82 309.7 236 70.3
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 1.0e-78 297.7 213 77.5
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 2.7e-68 263.1 174 81.6
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 1.8e-67 260.4 199 68.8
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 5.1e-67 258.8 157 86.0
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 1.1e-61 241.1 242 56.6
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 2.0e-58 230.3 232 59.5
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 3.4e-55 219.5 150 82.7
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.2e-52 211.1 129 88.4
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 2.1e-52 210.3 190 66.8
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 1.8e-51 207.2 283 52.7
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 2.8e-41 173.3 110 86.4
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 3.7e-33 146.4 97 78.4
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 8.3e-33 145.2 180 53.9
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 5.7e-26 122.5 119 58.0
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 2.3e-22 110.5 130 53.8
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.0e-14 85.1 59 78.0
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 6.8e-11 72.4 47 76.6


User provided reference genes

Program Settings