Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 5.7e-56 220.7 114 100.0
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 3.3e-35 151.8 117 72.6
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 4.0e-33 144.8 80 87.5
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 2.9e-31 138.7 126 62.7
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 8.4e-31 137.1 120 65.0
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 1.5e-27 126.3 123 61.0
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 1.8e-25 119.4 129 62.0
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 4.0e-25 118.2 85 71.8
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 1.7e-23 112.8 82 72.0
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 2.2e-23 112.5 83 75.9
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.9e-22 109.4 113 50.4
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 8.7e-20 100.5 116 47.4
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 3.3e-19 98.6 83 60.2
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 5.6e-19 97.8 75 66.7
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 5.6e-19 97.8 83 57.8
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 5.6e-19 97.8 121 47.9
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 5.6e-19 97.8 85 58.8
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 9.6e-19 97.1 108 50.9
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 1.3e-18 96.7 119 45.4
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 1.3e-18 96.7 83 61.4
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 2.8e-18 95.5 119 47.1
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 4.8e-18 94.7 89 57.3
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 8.1e-18 94.0 82 61.0
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 8.1e-18 94.0 82 58.5
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 1.1e-17 93.6 120 45.0
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 4.0e-17 91.7 103 51.5
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 6.9e-17 90.9 81 56.8
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 6.9e-17 90.9 81 56.8
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 9.0e-17 90.5 111 45.9
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 2.6e-16 89.0 74 56.8
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 2.6e-16 89.0 73 58.9
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 2.6e-16 89.0 73 58.9
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 4.5e-16 88.2 78 52.6
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 5.8e-16 87.8 83 54.2
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 5.8e-16 87.8 78 61.5
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 7.6e-16 87.4 74 60.8
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 7.6e-16 87.4 76 56.6
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 1.7e-15 86.3 73 60.3
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 2.4e-14 82.4 81 56.8
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 4.2e-14 81.6 76 60.5
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 1.6e-13 79.7 64 62.5
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 2.7e-13 79.0 81 55.6
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 4.6e-13 78.2 114 48.2
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 6.0e-13 77.8 79 54.4
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 7.9e-13 77.4 99 45.5
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 7.9e-13 77.4 62 64.5
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 1.8e-12 76.3 75 53.3
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 3.0e-12 75.5 101 44.6
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 3.0e-12 75.5 101 44.6
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 3.9e-12 75.1 76 51.3
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 6.7e-12 74.3 98 45.9
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 6.7e-12 74.3 79 53.2
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 8.7e-12 73.9 74 52.7
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 2.5e-11 72.4 75 53.3
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 2.5e-11 72.4 75 48.0
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 2.5e-11 72.4 79 51.9
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 2.5e-11 72.4 79 51.9
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 2.5e-11 72.4 73 50.7
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 2.5e-11 72.4 73 53.4
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 7.4e-11 70.9 68 61.8
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 3.6e-10 68.6 67 53.7
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 2.4e-09 65.9 61 59.0
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 1.2e-08 63.5 68 48.5
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 1.2e-08 63.5 68 48.5
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 9.9e-08 60.5 78 43.6
Cpa.g.sc30.141 Carica papaya HOM05D008198 ORTHO05D010220 5.5e-06 54.7 77 40.3


User provided reference genes

Program Settings