Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18217_v3 Cicer arietinum L. HOM05D005477 ORTHO05D006721 2.1e-39 165.2 82 100.0
Psat7g087320 Pisum sativum HOM05D005477 ORTHO05D006721 1.3e-38 162.5 82 97.6
TPR.G27391 Trifolium pratense HOM05D005477 ORTHO05D006721 1.9e-37 158.7 82 95.1
Glyma.05G134900 Glycine max HOM05D005477 ORTHO05D006721 3.3e-37 157.9 81 95.1
Glyma.08G090100 Glycine max HOM05D005477 ORTHO05D006721 3.3e-37 157.9 81 95.1
Phvul.002G187200 Phaseolus vulgaris HOM05D005477 ORTHO05D006721 4.8e-36 154.1 82 92.7
Lj4g0025411 Lotus japonicus HOM05D005477 ORTHO05D006721 8.1e-36 153.3 82 91.5
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea HOM05D005477 ORTHO05D006721 3.1e-35 151.4 82 90.2
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea HOM05D005477 ORTHO05D006721 3.1e-35 151.4 82 90.2
Manes.03G072100 Manihot esculenta HOM05D005477 ORTHO05D006721 5.3e-35 150.6 82 90.2
Lalb_Chr07g0188151 Lupinus albus HOM05D005477 ORTHO05D006721 6.9e-35 150.2 82 90.2
Medtr4g094792 Medicago truncatula HOM05D005477 ORTHO05D006721 9.0e-35 149.8 76 97.4
Potri.001G074901 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.5e-34 149.1 82 86.6
Potri.003G156301 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.5e-34 149.1 82 89.0
COL.COLO4_25033 Corchorus olitorius HOM05D005477 ORTHO05D006721 4.4e-34 147.5 82 86.6
Lalb_Chr13g0293041 Lupinus albus HOM05D005477 ORTHO05D006721 5.8e-34 147.1 82 85.4
Dinv17881 Davidia involucrata HOM05D005477 ORTHO05D006721 7.6e-34 146.7 82 86.6
Gohir.A12G050600 Gossypium hirsutum HOM05D005477 ORTHO05D006721 9.9e-34 146.4 82 84.1
Gohir.A12G050700 Gossypium hirsutum HOM05D005477 ORTHO05D006721 9.9e-34 146.4 82 84.1
Gohir.D12G048900 Gossypium hirsutum HOM05D005477 ORTHO05D006721 9.9e-34 146.4 82 84.1
Gohir.D12G049000 Gossypium hirsutum HOM05D005477 ORTHO05D006721 9.9e-34 146.4 82 84.1
Gorai.008G051800 Gossypium raimondii HOM05D005477 ORTHO05D006721 9.9e-34 146.4 82 84.1
Prupe.4G120200 Prunus persica HOM05D005477 ORTHO05D006721 1.3e-33 146.0 82 85.4
Thecc.02G001600 Theobroma cacao HOM05D005477 ORTHO05D006721 1.3e-33 146.0 82 85.4
Ciclev10017510m.g Citrus clementina HOM05D005477 ORTHO05D006721 1.7e-33 145.6 82 85.4
Gorai.008G051900 Gossypium raimondii HOM05D005477 ORTHO05D006721 1.7e-33 145.6 82 82.9
CANSAT35G0922 Cannabis sativa HOM05D005477 ORTHO05D006721 2.2e-33 145.2 82 85.4
Atru.chr10.245 Acer truncatum HOM05D005477 ORTHO05D006721 2.9e-33 144.8 80 86.2
CiPaw.09G140100 Carya illinoinensis HOM05D005477 ORTHO05D006721 2.9e-33 144.8 82 84.1
Eucgr.E04324 Eucalyptus grandis HOM05D005477 ORTHO05D006721 4.9e-33 144.1 82 82.9
Sabra01G0054000 Salix brachista HOM05D005477 ORTHO05D006721 6.4e-33 143.7 77 87.0
Sabra03G0113300 Salix brachista HOM05D005477 ORTHO05D006721 6.4e-33 143.7 77 88.3
Ah.08g212300 Amaranthus hybridus HOM05D003310 ORTHO05D006721 1.1e-32 142.9 77 87.0
Ah.15g091860 Amaranthus hybridus HOM05D005477 ORTHO05D006721 1.1e-32 142.9 80 85.0
MELO3C006999.2 Cucumis melo HOM05D005477 ORTHO05D006721 1.4e-32 142.5 82 81.7
Dinv01135 Davidia involucrata HOM05D005477 ORTHO05D006721 1.4e-32 142.5 82 82.9
Nn7g38416 Nelumbo nucifera HOM05D005477 ORTHO05D006721 1.4e-32 142.5 80 85.0
PGR042G1348 Punica granatum HOM05D005477 ORTHO05D006721 1.4e-32 142.5 80 83.8
MD10G1225400 Malus domestica HOM05D005477 ORTHO05D006721 2.4e-32 141.7 82 81.7
HanXRQChr14g0439061 Helianthus annuus HOM05D005477 ORTHO05D006721 3.2e-32 141.4 82 82.9
MD05G1243500 Malus domestica HOM05D005477 ORTHO05D006721 3.2e-32 141.4 82 80.5
Cpa.g.sc2054.1 Carica papaya HOM05D005477 ORTHO05D006721 5.4e-32 140.6 75 88.0
PSO675G9273 Papaver somniferum HOM05D005477 ORTHO05D006721 5.4e-32 140.6 82 80.5
FvH4_3g13280 Fragaria vesca HOM05D005477 ORTHO05D006721 9.3e-32 139.8 82 79.3
FAN11G1325 Fragaria x ananassa HOM05D005477 ORTHO05D006721 9.3e-32 139.8 82 79.3
FAN16G3377 Fragaria x ananassa HOM05D005477 ORTHO05D006721 9.3e-32 139.8 82 79.3
FAN21G3865 Fragaria x ananassa HOM05D005477 ORTHO05D006721 9.3e-32 139.8 82 79.3
Sed0007385 Sechium edule HOM05D005477 ORTHO05D006721 9.3e-32 139.8 82 80.5
Hund08547 Selenicereus undatus HOM05D005477 ORTHO05D006721 1.2e-31 139.4 80 82.5
EL10Ac7g17253 Beta vulgaris HOM05D005477 ORTHO05D006721 1.6e-31 139.0 76 86.8
HanXRQChr09g0257861 Helianthus annuus HOM05D005477 ORTHO05D006721 1.6e-31 139.0 80 81.2
TAR624G0209 Trochodendron aralioides HOM05D005477 ORTHO05D006721 1.6e-31 139.0 82 79.3
QL11p010970 Quercus lobata HOM05D005477 ORTHO05D006721 2.1e-31 138.7 75 88.0
CSS0024293 Camellia sinensis var. sinensis HOM05D005477 ORTHO05D006721 2.7e-31 138.3 80 80.0
Cfa001157 Carpinus fangiana HOM05D005477 ORTHO05D006721 3.5e-31 137.9 75 88.0
AUR62040995 Chenopodium quinoa HOM05D005477 ORTHO05D006721 3.5e-31 137.9 77 84.4
Haze_05194 Corylus avellana HOM05D005477 ORTHO05D006721 3.5e-31 137.9 75 88.0
FAN25G0727 Fragaria x ananassa HOM05D005477 ORTHO05D006721 3.5e-31 137.9 82 78.0
vmacro03568 Vaccinium macrocarpon HOM05D005477 ORTHO05D006721 3.5e-31 137.9 75 86.7
AUR62042809 Chenopodium quinoa HOM05D005477 ORTHO05D006721 4.6e-31 137.5 76 85.5
Aqoxy1G01389 Aquilegia oxysepala HOM05D005477 ORTHO05D006721 6.0e-31 137.1 81 77.8
ClCG01G025920 Citrullus lanatus HOM05D005477 ORTHO05D006721 6.0e-31 137.1 75 85.3
RcHm_v2.0_Chr5g0021751 Rosa chinensis HOM05D005477 ORTHO05D006721 6.0e-31 137.1 82 78.0
THA.LOC104812922 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 7.8e-31 136.7 82 79.3
Lsat_1_v5_gn_2_59701 Lactuca sativa HOM05D005477 ORTHO05D006721 1.0e-30 136.3 75 85.3
CiPaw.10G107900 Carya illinoinensis HOM05D005477 ORTHO05D006721 1.3e-30 136.0 75 85.3
Os07g0498300 Oryza sativa ssp. japonica HOM05D005477 ORTHO05D006721 1.3e-30 136.0 82 78.0
THA.LOC104811905 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 1.7e-30 135.6 82 78.0
MSTRG.16378 Avicennia marina HOM05D005477 ORTHO05D006721 2.3e-30 135.2 82 76.8
MBI18_g35539_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 2.3e-30 135.2 80 78.8
Sc24g0002840 Simmondsia chinensis HOM05D005477 ORTHO05D006721 2.3e-30 135.2 76 82.9
CsaV3_6G053130 Cucumis sativus L. HOM05D005477 ORTHO05D006721 3.9e-30 134.4 75 82.7
Thhalv10026700m.g Eutrema salsugineum HOM05D005477 ORTHO05D006721 5.1e-30 134.0 82 76.8
Sopen10g001220 Solanum pennellii HOM05D005477 ORTHO05D006721 5.1e-30 134.0 82 76.8
BcaNung03492 Brassica carinata HOM05D005477 ORTHO05D006721 8.7e-30 133.3 82 75.6
Duzib132G0617 Durio zibethinus HOM05D005477 ORTHO05D006721 8.7e-30 133.3 82 78.0
Sp7g18580 Schrenkiella parvula HOM05D005477 ORTHO05D006721 8.7e-30 133.3 82 76.8
AL7G33670 Arabidopsis lyrata HOM05D005477 ORTHO05D006721 1.1e-29 132.9 82 76.8
Carub.0007s2098 Capsella rubella HOM05D005477 ORTHO05D006721 1.1e-29 132.9 82 76.8
CARHR226980 Cardamine hirsuta HOM05D005477 ORTHO05D006721 1.1e-29 132.9 82 75.6
ECA238G4156 Erigeron canadensis HOM05D005477 ORTHO05D006721 1.1e-29 132.9 82 75.6
BcaB03g11659 Brassica carinata HOM05D005477 ORTHO05D006721 1.5e-29 132.5 82 75.6
BcaC01g00657 Brassica carinata HOM05D005477 ORTHO05D006721 1.5e-29 132.5 82 75.6
BcaC06g30645 Brassica carinata HOM05D005477 ORTHO05D006721 1.5e-29 132.5 82 75.6
Peaxi162Scf00700g00728 Petunia axillaris HOM05D005477 ORTHO05D006721 1.5e-29 132.5 81 75.3
AT4G20150 Arabidopsis thaliana HOM05D005477 ORTHO05D006721 1.9e-29 132.1 82 75.6
BcaNung03709 Brassica carinata HOM05D005477 ORTHO05D006721 2.5e-29 131.7 82 75.6
Peaxi162Scf00203g01320 Petunia axillaris HOM05D005477 ORTHO05D006721 3.3e-29 131.3 82 74.4
GSVIVG01010508001 Vitis vinifera HOM05D005477 ORTHO05D006721 3.3e-29 131.3 82 75.6
A03p52320 Brassica napus HOM05D005477 ORTHO05D006721 4.3e-29 131.0 75 80.0
Nitab4.5_0001299g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 4.3e-29 131.0 80 75.0
Oeu046914.1 Olea europaea HOM05D005477 ORTHO05D006721 7.3e-29 130.2 75 80.0
CDE12G0557 Ceratophyllum demersum HOM05D005477 ORTHO05D006721 9.6e-29 129.8 82 74.4
Aa31LG6G2560 Aethionema arabicum HOM05D005477 ORTHO05D006721 1.3e-28 129.4 75 78.7
unitig_748.g7487 Utricularia gibba HOM05D005477 ORTHO05D006721 1.3e-28 129.4 80 75.0
C07p50750 Brassica napus HOM05D005477 ORTHO05D006721 2.1e-28 128.6 75 77.3
Oeu005613.1 Olea europaea HOM05D005477 ORTHO05D006721 2.1e-28 128.6 75 78.7
Cc09_g04680 Coffea canephora HOM05D005477 ORTHO05D006721 2.8e-28 128.3 82 70.7
A08p14650 Brassica napus HOM05D005477 ORTHO05D006721 3.6e-28 127.9 75 77.3
C03p82800 Brassica napus HOM05D005477 ORTHO05D006721 3.6e-28 127.9 75 77.3
BolC3t20562H Brassica oleracea HOM05D005477 ORTHO05D006721 3.6e-28 127.9 75 77.3
BolC7t45576H Brassica oleracea HOM05D005477 ORTHO05D006721 3.6e-28 127.9 75 77.3
BraA03t14308Z Brassica rapa HOM05D005477 ORTHO05D006721 3.6e-28 127.9 75 77.3
BraA08t33453Z Brassica rapa HOM05D005477 ORTHO05D006721 3.6e-28 127.9 75 77.3
Solyc10g005230.3 Solanum lycopersicum HOM05D005477 ORTHO05D006721 4.8e-28 127.5 75 77.3
A01p11900 Brassica napus HOM05D005477 ORTHO05D006721 6.2e-28 127.1 75 77.3
BraA01t01132Z Brassica rapa HOM05D005477 ORTHO05D006721 6.2e-28 127.1 75 77.3
CiPaw.06G130100 Carya illinoinensis HOM05D005477 ORTHO05D006721 6.2e-28 127.1 75 80.0
MBI18_g18219_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 6.2e-28 127.1 75 78.7
PGSC0003DMG400011262 Solanum tuberosum HOM05D005477 ORTHO05D006721 6.2e-28 127.1 77 75.3
HPP92_026455 Vanilla planifolia HOM05D005477 ORTHO05D006721 6.2e-28 127.1 81 74.1
Nitab4.5_0004786g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 8.1e-28 126.7 75 77.3
DCAR_001258 Daucus carota HOM05D005477 ORTHO05D006721 1.4e-27 125.9 75 78.7
MBI18_g21701_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 1.4e-27 125.9 75 78.7
DCAR_004357 Daucus carota HOM05D005477 ORTHO05D006721 2.4e-27 125.2 77 76.6
Migut.M02030 Erythranthe guttata HOM05D005477 ORTHO05D006721 4.0e-27 124.4 81 72.8
Zm00001eb105410 Zea mays HOM05D005477 ORTHO05D006721 4.0e-27 124.4 76 76.3
SHI16868 Sapria himalayana HOM05D005477 ORTHO05D006721 9.0e-27 123.2 70 80.0
Zm00001eb321910 Zea mays HOM05D005477 ORTHO05D006721 9.0e-27 123.2 76 75.0
ATR0763G104 Amborella trichopoda HOM05D005477 ORTHO05D006721 1.5e-26 122.5 76 72.4
DCAR_016635 Daucus carota HOM05D005477 ORTHO05D006721 3.4e-26 121.3 75 77.3
PSO675G4749 Papaver somniferum HOM05D005477 ORTHO05D006721 2.2e-25 118.6 82 72.0
CAN.G105.21 Capsicum annuum HOM05D005477 ORTHO05D006721 1.4e-24 115.9 75 69.3
TWI38G0021 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 1.4e-24 115.9 80 65.0
Lalb_Chr07g0188141 Lupinus albus HOM05D005477 ORTHO05D006721 6.0e-23 110.5 76 65.8
TWI15G0858 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 1.3e-20 102.8 80 52.5
Pp3c14_13800 Physcomitrium patens HOM05D005477 ORTHO05D006721 2.4e-19 98.6 76 56.6
Pp3c1_24730 Physcomitrium patens HOM05D005477 ORTHO05D006721 3.1e-19 98.2 80 53.8
Mapoly0053s0096 Marchantia polymorpha HOM05D005477 ORTHO05D006721 5.8e-18 94.0 76 55.3
CBR_g39209 Chara braunii HOM05D005477 ORTHO05D006721 2.2e-17 92.0 76 53.9
AagrBONN_evm.TU.Sc2ySwM_362.2068 Anthoceros agrestis HOM05D005477 ORTHO05D006721 2.1e-15 85.5 75 49.3
Oeu039133.1 Olea europaea HOM05D005477 ORTHO05D006721 2.7e-15 85.1 49 71.4
SMO134G0137 Selaginella moellendorffii HOM05D005477 ORTHO05D006721 1.9e-13 79.0 77 46.8
GSVIVG01010076001 Vitis vinifera HOM05D005477 ORTHO05D006721 4.8e-12 74.3 51 66.7
MCO10G264 Micromonas commoda HOM05D005477 ORTHO05D006721 1.4e-11 72.8 69 46.4
MBI15_g47666_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 9.0e-11 70.1 69 56.5
MBI15_g35018_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 2.0e-10 68.9 37 81.1
Aa31LG9G8470 Aethionema arabicum HOM05D005477 ORTHO05D006721 4.2e-08 61.2 37 73.0


User provided reference genes

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