Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 3.0e-183 645.2 362 100.0
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 1.2e-147 526.9 367 83.4
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.9e-129 466.5 362 72.4
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.0e-127 460.7 348 75.3
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.3e-125 453.8 369 72.4
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 3.0e-122 442.6 351 73.2
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 3.1e-111 406.0 352 67.0
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 4.9e-109 398.7 350 64.3
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 5.4e-108 395.2 350 66.9
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 9.2e-108 394.4 363 64.7
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.6e-107 393.7 360 64.7
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 2.1e-107 393.3 369 66.1
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.6e-104 383.6 355 65.1
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 6.2e-104 381.7 350 61.4
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 5.2e-103 378.6 398 61.1
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 8.9e-103 377.9 367 59.4
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.6e-102 376.3 352 62.5
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.4e-102 375.9 341 60.7
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 3.4e-102 375.9 360 61.4
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.2e-101 373.2 341 59.8
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 2.2e-101 373.2 350 62.0
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.9e-101 372.9 360 60.8
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 4.9e-101 372.1 341 62.2
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.4e-101 371.3 341 59.5
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 8.4e-101 371.3 347 64.3
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 7.1e-100 368.2 337 58.8
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 7.1e-100 368.2 355 58.6
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 9.2e-100 367.9 361 57.9
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 2.7e-99 366.3 366 67.5
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 4.6e-99 365.5 353 63.7
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 7.8e-99 364.8 353 61.2
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 8.6e-98 361.3 355 58.6
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 3.3e-97 359.4 367 60.2
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 4.3e-97 359.0 353 60.9
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.2e-96 357.5 362 58.0
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.2e-96 357.5 362 58.0
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.2e-96 357.5 362 57.7
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 4.7e-96 355.5 357 59.7
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 8.1e-96 354.8 365 56.7
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 8.1e-96 354.8 364 57.7
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 8.1e-96 354.8 365 56.2
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 1.1e-95 354.4 362 57.5
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 1.1e-95 354.4 344 62.5
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.8e-95 353.6 364 57.4
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.4e-95 353.2 328 60.1
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.2e-94 350.9 376 56.9
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.5e-94 350.5 366 55.7
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 7.6e-94 348.2 353 60.3
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 1.3e-93 347.4 370 55.4
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 2.2e-93 346.7 331 63.7
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 2.9e-93 346.3 354 59.6
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 3.8e-93 345.9 353 63.7
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 6.4e-93 345.1 377 57.0
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.9e-92 343.6 377 56.5
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 3.2e-92 342.8 372 58.3
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.2e-91 340.9 406 52.5
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 2.7e-91 339.7 368 56.5
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 7.8e-91 338.2 360 57.2
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.5e-89 334.0 352 57.7
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 3.3e-89 332.8 374 57.2
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 5.6e-89 332.0 376 55.3
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 9.6e-89 331.3 400 55.0
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 1.6e-88 330.5 346 55.2
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 6.2e-88 328.6 288 67.4
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 1.8e-87 327.0 287 65.9
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 5.3e-87 325.5 364 59.3
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 2.0e-86 323.6 348 59.8
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 7.6e-86 321.6 350 58.3
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.9e-85 318.9 280 62.1
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 4.9e-85 318.9 355 57.2
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 5.4e-84 315.5 396 51.3
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 1.6e-83 313.9 341 57.5
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 2.3e-82 310.1 304 62.8
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 3.9e-82 309.3 371 55.3
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 1.9e-81 307.0 366 54.4
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 2.5e-81 306.6 381 55.4
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 2.8e-80 303.1 364 51.1
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 8.1e-80 301.6 362 52.8
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 2.4e-79 300.1 364 49.7
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 5.3e-79 298.9 365 53.7
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 3.2e-76 289.7 366 51.4
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 3.2e-76 289.7 365 53.4
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 3.5e-75 286.2 353 53.3
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 3.7e-72 276.2 346 51.7
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 1.1e-71 274.6 290 60.0
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.8e-71 273.9 367 53.1
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 6.9e-71 271.9 353 49.0
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 4.9e-69 265.8 393 49.4
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 6.5e-69 265.4 353 52.4
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 5.0e-61 239.2 257 61.9
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 4.2e-60 236.1 312 54.5
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 2.1e-59 233.8 313 52.4
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 3.0e-58 229.9 379 42.2
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 9.7e-57 224.9 372 41.7
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.8e-56 223.4 351 42.5
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.1e-51 207.2 272 51.8
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.3e-49 199.9 291 47.8
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 9.7e-49 198.4 118 90.7
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.4e-47 193.7 249 55.0
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 5.3e-47 192.6 400 39.8
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 2.5e-44 183.7 273 42.1
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 2.1e-43 180.6 168 57.7
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 3.0e-42 176.8 356 37.4
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.2e-38 164.9 148 58.8
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.0e-37 161.8 312 43.9
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.2e-33 148.3 172 52.3
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 2.7e-30 137.1 195 46.7
TPR.G34759 Trifolium pratense HOM05D006889 ORTHO05D008614 3.4e-25 120.2 99 65.7
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 5.4e-23 112.8 62 93.5
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 1.6e-19 101.3 69 78.3
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 1.4e-18 98.2 198 43.9
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 1.7e-16 91.3 298 34.9
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 7.0e-15 85.9 298 33.2
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 5.0e-13 79.7 174 40.8
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.5e-12 78.2 174 40.2
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 4.0e-10 70.1 123 35.0
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.2e-09 68.6 37 83.8
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.7e-08 63.5 251 27.5
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 4.9e-08 63.2 65 61.5
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 1.4e-07 61.6 87 39.1
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 9.2e-07 58.9 81 48.1


User provided reference genes

Program Settings