Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 2.9e-157 558.5 282 100.0
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 4.4e-97 358.6 312 66.0
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 1.3e-85 320.5 281 66.9
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 9.8e-81 304.3 360 52.8
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 1.8e-74 283.5 313 55.9
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 5.2e-58 228.8 299 49.8
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 2.9e-56 223.0 300 50.0
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 4.9e-56 222.2 239 56.9
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 8.3e-56 221.5 292 48.6
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 4.6e-54 215.7 300 46.7
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.3e-53 214.2 300 46.7
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.3e-53 214.2 300 46.7
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 1.5e-52 210.7 252 53.2
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 3.3e-44 183.0 299 41.8
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 1.1e-42 177.9 264 45.5
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.5e-41 174.1 296 40.2
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.6e-41 173.3 276 40.9
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 4.6e-38 162.5 325 36.9
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 5.1e-37 159.1 293 37.5
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.1e-36 157.9 286 38.5
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 2.5e-36 156.8 276 36.6
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 5.6e-36 155.6 280 36.4
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 6.2e-35 152.1 284 35.9
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 1.8e-34 150.6 274 37.6
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 5.3e-34 149.1 283 37.1
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 2.6e-33 146.7 315 37.1
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 2.9e-32 143.3 214 41.1
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 3.8e-32 142.9 291 36.8
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 8.4e-32 141.7 232 40.5
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 1.9e-31 140.6 221 41.2
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 4.2e-31 139.4 154 48.7
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 4.2e-31 139.4 338 31.7
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 7.1e-31 138.7 231 39.8
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.6e-30 137.5 249 40.6
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.6e-30 137.5 249 40.6
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 3.5e-30 136.3 290 34.1
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 4.6e-30 136.0 243 37.4
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 1.3e-29 134.4 275 34.9
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 1.3e-29 134.4 308 32.8
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 1.3e-29 134.4 308 34.1
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.7e-29 134.0 286 33.6
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 1.7e-29 134.0 288 34.4
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 2.3e-29 133.7 313 34.2
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 2.3e-29 133.7 302 34.4
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 3.9e-29 132.9 280 35.7
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 1.9e-28 130.6 307 32.6
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 3.3e-28 129.8 310 32.3
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 4.3e-28 129.4 201 41.3
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 5.6e-28 129.0 327 33.6
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 9.6e-28 128.3 292 33.9
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 3.6e-27 126.3 313 32.3
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 4.8e-27 125.9 276 34.1
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 1.8e-26 124.0 282 31.2
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 5.3e-26 122.5 249 32.9
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 9.0e-26 121.7 330 32.1
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 6.4e-24 115.5 193 35.2
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.9e-23 114.0 306 29.4
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 9.3e-23 111.7 189 35.4
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 2.1e-22 110.5 156 37.8
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 2.7e-22 110.2 205 36.6
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 7.9e-22 108.6 297 29.6
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.0e-21 108.2 205 36.1
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 3.0e-21 106.7 146 41.1
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 3.9e-21 106.3 206 36.9
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 1.1e-20 104.8 172 36.6
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 2.5e-20 103.6 146 42.5
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 2.1e-19 100.5 289 29.4
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 1.4e-18 97.8 278 28.8
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 4.0e-18 96.3 165 33.3
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 5.3e-18 95.9 277 28.2
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 6.9e-18 95.5 109 44.0
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 8.4e-16 88.6 149 32.2
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 2.7e-14 83.6 277 28.9
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 3.5e-14 83.2 178 32.6
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 1.3e-13 81.3 253 28.1
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 1.8e-13 80.9 276 28.6
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 1.5e-12 77.8 168 31.5
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 2.5e-12 77.0 250 26.8
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 2.5e-12 77.0 109 38.5
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 3.3e-12 76.6 168 30.4
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 3.3e-12 76.6 168 30.4
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 3.3e-12 76.6 168 31.0
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 3.3e-12 76.6 121 40.5
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 5.7e-12 75.9 219 30.1
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 1.3e-11 74.7 279 25.8
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 1.6e-11 74.3 168 30.4
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 3.7e-11 73.2 274 25.2
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 3.7e-11 73.2 145 36.6
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 1.4e-10 71.2 274 25.9
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 1.8e-10 70.9 276 25.7
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 2.4e-10 70.5 274 25.9
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 3.1e-10 70.1 274 25.5
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 2.0e-09 67.4 222 29.7
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 2.6e-09 67.0 203 31.0
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 4.5e-09 66.2 274 25.5
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 4.5e-09 66.2 274 25.5
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 5.9e-09 65.9 281 23.1
Os04g0504700 Oryza sativa ssp. japonica HOM05D007857 ORTHO05D009355 2.2e-08 63.9 104 29.8
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 1.2e-06 58.2 170 25.9


User provided reference genes

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