Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.9e-270 935.3 465 100.0
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 1.5e-256 889.0 456 95.2
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 2.2e-255 885.2 456 95.4
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 2.4e-241 838.6 458 90.8
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 6.9e-241 837.0 457 90.6
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 6.9e-241 837.0 457 90.4
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 3.2e-238 828.2 456 89.5
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 3.2e-230 801.6 456 85.5
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 4.7e-221 771.2 459 83.2
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.3e-218 763.1 467 81.6
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 8.0e-213 743.8 453 80.1
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.6e-211 738.8 456 79.2
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 1.4e-209 733.0 456 78.3
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 3.1e-209 731.9 457 80.1
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.2e-208 729.9 458 78.6
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 3.5e-208 728.4 462 78.6
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 5.9e-208 727.6 451 78.5
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 2.2e-207 725.7 456 78.1
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 3.8e-207 724.9 455 78.0
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 8.5e-207 723.8 456 78.5
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 2.5e-206 722.2 450 78.4
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 3.2e-206 721.8 456 78.3
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 4.7e-205 718.0 451 77.4
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 1.4e-204 716.5 438 79.9
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.8e-204 716.1 457 77.0
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 6.8e-204 714.1 465 75.7
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 6.8e-204 714.1 455 77.1
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 8.8e-204 713.8 448 78.1
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 5.7e-203 711.1 454 75.3
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 9.8e-203 710.3 446 77.8
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.7e-202 709.5 441 79.1
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 2.2e-202 709.1 452 77.0
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 6.3e-202 707.6 437 78.3
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.1e-201 706.8 455 77.8
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.1e-201 706.8 450 75.6
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 1.4e-201 706.4 455 76.0
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.4e-201 705.7 442 79.2
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 3.1e-201 705.3 454 75.6
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 4.1e-201 704.9 431 78.4
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 7.0e-201 704.1 438 77.6
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 2.7e-200 702.2 456 73.7
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 5.9e-200 701.0 455 74.9
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 1.7e-199 699.5 451 74.1
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 2.2e-199 699.1 438 77.4
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.8e-199 698.4 449 76.2
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 5.0e-199 698.0 456 76.8
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 6.5e-199 697.6 452 77.2
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 6.5e-199 697.6 453 75.9
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 8.5e-199 697.2 437 77.6
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 1.5e-198 696.4 449 75.5
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 1.9e-198 696.0 451 75.2
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 3.2e-198 695.3 435 77.0
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 4.2e-198 694.9 449 73.5
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 7.2e-198 694.1 487 70.6
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 9.4e-198 693.7 417 80.3
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.2e-197 693.3 456 75.7
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 1.2e-197 693.3 451 73.6
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.7e-197 692.2 455 74.5
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 4.7e-197 691.4 457 73.7
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 4.7e-197 691.4 477 73.2
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 6.1e-197 691.0 434 78.6
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 6.1e-197 691.0 455 74.3
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 6.3e-194 681.0 473 70.2
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 1.1e-193 680.2 451 72.5
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 1.8e-193 679.5 470 70.0
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 3.1e-193 678.7 455 72.1
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 4.1e-193 678.3 451 72.1
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 7.0e-193 677.6 438 73.7
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 7.0e-193 677.6 459 70.8
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.6e-192 676.4 452 73.0
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 2.7e-192 675.6 461 69.8
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.0e-191 673.7 452 75.4
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 1.3e-191 673.3 462 71.0
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 5.0e-191 671.4 451 71.6
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 6.6e-191 671.0 451 72.1
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 2.5e-190 669.1 451 71.8
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 3.6e-189 665.2 471 68.8
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 8.0e-189 664.1 480 67.9
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 1.4e-188 663.3 457 71.8
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.4e-188 663.3 451 72.1
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.0e-188 662.1 451 72.5
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 2.0e-187 659.4 461 70.3
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 2.6e-187 659.1 457 72.0
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 3.4e-187 658.7 457 71.6
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 4.4e-187 658.3 443 72.2
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 4.9e-186 654.8 451 71.0
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 3.2e-185 652.1 456 73.5
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 2.3e-183 646.0 483 69.2
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 5.0e-183 644.8 430 69.8
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.2e-181 640.2 403 76.4
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 6.1e-181 637.9 510 66.3
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.0e-180 637.1 465 68.8
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 3.4e-179 632.1 462 68.6
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 2.9e-178 629.0 410 76.1
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 1.0e-175 620.5 486 63.4
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 1.9e-174 616.3 415 71.6
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.1e-172 610.5 409 73.6
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 1.3e-170 603.6 388 73.2
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 2.9e-170 602.4 453 66.4
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.1e-166 590.5 363 78.5
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 9.5e-166 587.4 468 64.5
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.6e-165 586.6 451 66.1
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 2.2e-162 576.2 451 64.3
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.8e-156 556.6 450 60.9
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 5.2e-156 555.1 426 62.0
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 1.7e-151 540.0 438 57.8
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.1e-149 533.1 277 93.1
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 6.2e-149 531.6 429 60.6
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 6.4e-146 521.5 322 78.3
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 1.9e-145 520.0 433 56.8
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 5.3e-132 475.3 457 57.5
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.6e-117 427.2 451 54.8
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 1.3e-114 417.5 450 45.8
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 2.5e-105 386.7 425 47.8
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 5.5e-97 359.0 367 55.6
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 2.7e-96 356.7 315 60.0
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 1.9e-89 334.0 188 87.8
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 5.4e-84 315.8 486 37.4
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.0e-82 311.6 182 80.2
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.8e-56 223.8 345 40.3
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 1.8e-55 221.1 376 39.1
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 9.2e-52 208.8 108 86.1
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 5.4e-44 183.0 129 77.5
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.9e-41 174.5 124 71.8
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 1.2e-38 165.2 390 33.3
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.5e-35 153.7 137 57.7
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 2.1e-32 144.4 105 67.6
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 6.4e-29 132.9 85 67.1
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 2.1e-24 117.9 126 46.8
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 4.5e-22 110.2 67 71.6
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 5.5e-20 103.2 189 30.7
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.2e-19 102.1 53 77.4
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 1.6e-19 101.7 77 62.3
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 4.6e-19 100.1 66 72.7
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-18 97.8 126 48.4
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 7.4e-17 92.8 105 53.3
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.5e-14 85.1 70 58.6
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 1.3e-13 82.0 57 73.7
VMungo0720G2142 Vigna mungo HOM05D008589 ORTHO05D010715 1.0e-05 55.8 65 50.8


User provided reference genes

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