Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 2.7e-208 728.4 361 100.0
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 5.7e-166 587.8 371 81.4
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.1e-164 583.6 376 79.3
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 9.1e-148 527.3 376 71.3
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 6.5e-146 521.2 294 85.4
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.0e-143 513.8 294 84.0
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 1.3e-141 506.9 311 78.8
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 3.7e-141 505.4 314 78.7
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 3.7e-141 505.4 376 69.7
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 8.2e-141 504.2 314 77.4
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.8e-140 503.1 354 71.8
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 3.1e-140 502.3 371 69.0
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 4.1e-140 501.9 310 78.1
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 4.1e-140 501.9 368 68.8
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 4.1e-140 501.9 358 69.0
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 3.5e-139 498.8 373 67.8
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 5.9e-139 498.0 310 77.4
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.9e-139 498.0 374 67.9
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 7.7e-139 497.7 373 67.3
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.3e-138 496.9 299 79.6
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 1.3e-138 496.9 297 79.1
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.7e-138 496.5 373 67.0
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 2.2e-138 496.1 376 66.8
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 2.9e-138 495.7 386 65.3
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 5.0e-138 495.0 327 71.9
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 6.5e-138 494.6 377 66.3
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 6.5e-138 494.6 337 70.6
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 1.1e-137 493.8 303 76.9
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.5e-137 493.4 383 67.4
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.5e-137 493.4 342 69.9
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 4.2e-137 491.9 295 79.0
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 1.2e-136 490.3 294 78.2
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.2e-136 490.3 353 70.8
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 2.1e-136 489.6 374 66.3
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 2.7e-136 489.2 311 74.3
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 3.6e-136 488.8 361 67.0
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 3.6e-136 488.8 345 68.7
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 8.0e-136 487.6 366 67.5
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.0e-135 487.3 309 75.7
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 1.4e-135 486.9 374 65.2
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 1.4e-135 486.9 295 78.3
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.8e-135 486.5 353 68.6
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.3e-135 486.1 318 74.8
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.0e-135 485.7 294 78.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 5.2e-135 485.0 294 77.9
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 8.8e-135 484.2 301 76.1
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 8.8e-135 484.2 362 66.6
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.2e-134 483.8 369 66.7
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.2e-134 483.8 369 66.7
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 1.2e-134 483.8 301 75.7
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.5e-134 483.4 294 75.2
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 2.0e-134 483.0 293 76.1
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 3.4e-134 482.3 313 74.1
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 3.4e-134 482.3 353 68.3
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 5.7e-134 481.5 293 78.5
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 7.5e-134 481.1 375 63.7
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 9.8e-134 480.7 307 75.2
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 1.3e-133 480.3 379 66.8
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 2.8e-133 479.2 369 65.6
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 2.8e-133 479.2 337 69.7
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.8e-133 479.2 354 66.9
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 6.3e-133 478.0 316 72.2
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 6.3e-133 478.0 346 69.4
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 6.3e-133 478.0 295 76.9
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 3.1e-132 475.7 291 77.7
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 4.1e-132 475.3 315 70.5
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 4.1e-132 475.3 359 65.5
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 5.4e-132 474.9 294 76.2
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 5.4e-132 474.9 370 64.6
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 9.1e-132 474.2 294 75.2
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.6e-131 473.4 324 69.1
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 2.0e-131 473.0 321 69.2
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.7e-131 472.6 313 70.9
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 2.7e-131 472.6 291 76.3
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 7.7e-131 471.1 317 69.1
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 7.7e-131 471.1 317 69.1
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 1.3e-130 470.3 291 73.9
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 1.3e-130 470.3 307 73.0
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 2.2e-130 469.5 330 67.3
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 2.9e-130 469.2 330 67.3
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 8.5e-130 467.6 294 74.8
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 1.1e-129 467.2 314 68.8
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 1.1e-129 467.2 318 67.9
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 1.5e-129 466.8 366 65.8
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 5.5e-129 464.9 299 73.2
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 1.6e-128 463.4 313 70.3
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 2.7e-128 462.6 309 72.2
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 1.8e-127 459.9 287 74.2
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.5e-126 456.8 342 67.0
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 3.4e-126 455.7 291 72.2
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 7.5e-126 454.5 291 70.4
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 2.2e-125 453.0 427 56.9
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 4.7e-120 435.3 368 61.7
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.3e-119 433.0 279 73.1
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 3.0e-119 432.6 345 61.2
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 3.4e-118 429.1 359 59.3
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 9.8e-118 427.6 291 66.0
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 4.9e-117 425.2 323 65.6
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 4.9e-117 425.2 291 69.4
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 6.4e-117 424.9 365 59.5
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 7.0e-116 421.4 316 61.7
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.2e-115 420.6 310 67.7
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 2.3e-114 416.4 296 64.5
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.0e-114 416.0 295 65.8
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 2.3e-111 406.4 229 83.0
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 1.6e-99 367.1 432 50.5
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 2.5e-97 359.8 369 57.7
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 5.4e-92 342.0 182 85.2
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 2.1e-88 330.1 276 62.7
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 2.8e-88 329.7 310 53.9
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 2.9e-77 293.1 215 61.9
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 4.9e-77 292.4 257 60.7
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 2.4e-76 290.0 254 59.1
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 4.2e-76 289.3 268 58.2
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 7.9e-75 285.0 214 65.9
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 1.4e-71 274.2 264 58.7
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 8.5e-45 185.3 242 45.5
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 2.9e-21 107.1 93 57.0
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 3.7e-16 90.1 136 40.4
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 6.3e-16 89.4 136 40.4
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.1e-15 87.0 70 58.6
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 2.6e-09 67.4 38 76.3


User provided reference genes

Program Settings