Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.7e-257 892.1 432 100.0
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 6.4e-225 783.9 432 86.8
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.8e-222 775.8 432 87.5
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.3e-201 706.4 430 79.5
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 2.2e-201 705.7 434 79.0
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 6.5e-201 704.1 432 78.2
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 7.4e-197 690.6 430 78.1
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 1.7e-193 679.5 432 75.7
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 1.9e-192 676.0 432 75.2
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 8.0e-175 617.5 432 67.6
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 4.1e-171 605.1 433 67.9
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 7.7e-170 600.9 427 68.6
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 7.7e-170 600.9 433 67.0
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 6.1e-167 591.3 432 66.4
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 7.5e-165 584.3 433 65.6
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 6.3e-164 581.3 360 78.1
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 4.1e-163 578.6 433 65.8
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.6e-162 576.6 435 65.1
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 2.0e-162 576.2 426 66.4
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 7.8e-162 574.3 433 64.0
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.3e-161 572.8 432 64.6
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 6.6e-161 571.2 435 64.1
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.5e-160 569.3 421 65.1
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 5.6e-160 568.2 435 64.8
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 5.6e-160 568.2 435 64.8
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 9.5e-160 567.4 434 65.2
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 9.5e-160 567.4 433 62.4
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 1.2e-159 567.0 432 63.4
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 2.8e-159 565.8 434 61.8
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 6.1e-159 564.7 433 65.8
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.4e-158 563.5 436 61.7
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 5.8e-157 558.1 384 70.1
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.7e-156 556.6 430 61.6
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 2.9e-156 555.8 434 62.7
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 6.4e-156 554.7 449 62.1
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 5.4e-155 551.6 441 62.4
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 7.0e-155 551.2 431 62.2
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 1.2e-154 550.4 434 62.2
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.6e-154 550.1 426 61.3
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 3.5e-154 548.9 424 63.0
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 3.5e-154 548.9 435 60.0
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 3.5e-154 548.9 421 62.5
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.0e-153 547.4 421 62.5
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 1.7e-153 546.6 432 66.2
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 2.3e-153 546.2 421 62.2
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 3.9e-153 545.4 441 61.9
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 6.6e-153 544.7 427 60.0
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 6.6e-153 544.7 431 61.3
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 2.5e-152 542.7 427 59.7
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 9.5e-152 540.8 388 67.3
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 6.2e-151 538.1 456 60.7
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.4e-150 537.0 431 63.3
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.1e-150 535.8 423 60.5
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 5.8e-149 531.6 432 59.3
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 5.8e-149 531.6 434 62.4
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 9.8e-149 530.8 413 61.0
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 2.9e-148 529.3 431 59.6
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 2.9e-148 529.3 392 63.8
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.9e-147 526.6 423 59.6
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.2e-147 525.8 423 59.6
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.2e-146 523.9 414 60.4
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 6.6e-145 518.1 424 59.4
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 8.6e-145 517.7 529 52.2
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 3.3e-144 515.8 422 60.7
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 9.5e-144 514.2 421 61.8
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 8.9e-142 507.7 423 59.3
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 2.9e-140 502.7 392 62.5
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.7e-137 493.4 421 56.5
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.5e-136 490.3 427 56.7
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 2.0e-133 479.9 431 54.5
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 3.4e-133 479.2 422 55.7
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 3.8e-132 475.7 364 62.6
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 6.4e-132 474.9 401 57.1
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 6.4e-132 474.9 427 54.3
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 9.2e-131 471.1 419 55.1
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 5.1e-129 465.3 411 57.4
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 8.7e-129 464.5 371 61.2
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 2.5e-128 463.0 431 53.6
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 3.3e-128 462.6 434 53.9
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 8.1e-127 458.0 415 55.2
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 2.1e-122 443.4 410 54.6
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 4.6e-122 442.2 410 54.6
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 4.6e-122 442.2 374 57.2
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 4.6e-122 442.2 408 53.7
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 4.6e-122 442.2 427 53.9
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 6.0e-122 441.8 423 53.0
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 7.8e-122 441.4 364 57.4
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 3.9e-121 439.1 409 54.5
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 5.1e-121 438.7 437 51.3
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 3.3e-120 436.0 652 39.4
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 4.3e-120 435.6 409 53.8
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 4.3e-120 435.6 409 53.8
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 9.3e-115 417.9 412 51.9
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.1e-107 394.4 426 48.4
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 9.3e-107 391.3 299 63.9
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.2e-90 337.8 293 57.7
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 5.1e-81 305.8 464 39.7
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 1.6e-74 284.3 457 38.1
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.0e-72 277.3 237 58.2
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 8.5e-68 261.9 269 50.9
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.1e-62 245.0 214 53.3
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.6e-53 214.5 216 50.0
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 3.5e-53 213.4 183 57.4
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.5e-48 198.0 188 51.1
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.2e-46 190.3 179 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.3e-44 184.9 249 45.4
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 1.7e-44 184.5 113 79.6
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 5.8e-40 169.5 113 69.9
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.1e-38 165.2 122 64.8
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.3e-35 152.5 124 58.1
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 5.8e-16 89.7 101 45.5
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 1.3e-12 78.6 98 45.9
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 4.3e-11 73.6 104 36.5
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.4e-09 68.6 50 64.0
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 9.0e-09 65.9 227 28.2
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.2e-08 65.5 192 26.0
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.6e-08 62.8 54 57.4


User provided reference genes

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