Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 7.6e-231 803.5 417 100.0
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 4.1e-168 595.1 413 78.2
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 2.5e-165 585.9 420 75.0
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 9.8e-154 547.4 426 71.1
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 1.3e-153 547.0 425 71.3
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 2.2e-153 546.2 428 71.0
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 3.3e-149 532.3 354 79.1
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 1.6e-148 530.0 429 68.5
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.4e-147 526.9 427 68.4
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 9.8e-138 494.2 425 63.3
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.1e-136 490.7 433 64.9
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 3.2e-136 489.2 425 62.8
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 8.7e-118 427.9 424 56.8
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 4.5e-114 415.6 423 55.3
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 1.6e-111 407.1 371 59.8
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 6.0e-111 405.2 424 54.5
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 1.3e-110 404.1 420 53.8
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 3.0e-110 402.9 424 54.5
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 3.7e-108 396.0 400 57.0
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 5.3e-107 392.1 420 52.4
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.5e-106 390.6 351 59.5
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 2.6e-106 389.8 415 53.5
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.3e-105 387.5 350 59.1
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 6.4e-105 385.2 351 58.4
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 8.4e-105 384.8 395 56.5
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.4e-104 383.3 350 58.6
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 2.3e-102 376.7 420 50.2
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.9e-102 375.9 351 57.5
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 1.1e-101 374.4 427 52.5
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 7.4e-101 371.7 385 54.0
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 2.1e-100 370.2 425 52.5
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 2.8e-100 369.8 385 53.8
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 5.3e-99 365.5 391 52.7
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 6.9e-99 365.2 395 52.7
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 2.2e-97 360.1 409 49.9
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 2.9e-97 359.8 421 50.4
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 8.4e-97 358.2 409 49.9
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 1.1e-96 357.8 392 51.0
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 1.9e-96 357.1 408 49.5
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 3.2e-96 356.3 367 54.0
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 5.5e-96 355.5 367 53.4
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 5.5e-96 355.5 367 53.4
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 1.2e-95 354.4 386 50.8
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 4.6e-95 352.4 427 48.5
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 3.0e-94 349.7 360 54.4
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 3.0e-94 349.7 412 48.1
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.1e-94 349.0 360 53.6
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 5.1e-94 349.0 378 52.1
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 7.6e-90 335.1 375 49.1
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 1.3e-89 334.3 403 49.4
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 2.2e-89 333.6 396 48.7
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 2.2e-89 333.6 416 48.1
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 3.8e-89 332.8 407 47.7
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 5.0e-89 332.4 413 46.2
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 8.5e-89 331.6 390 49.0
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 8.5e-89 331.6 330 54.5
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 4.2e-88 329.3 405 44.7
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 1.6e-87 327.4 415 46.7
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 4.6e-87 325.9 416 46.9
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 6.1e-87 325.5 396 47.5
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 6.1e-87 325.5 330 56.7
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 1.1e-85 321.2 320 53.8
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 1.9e-85 320.5 359 49.0
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 4.3e-85 319.3 386 50.0
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 5.7e-85 318.9 382 49.0
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 9.7e-85 318.2 323 54.8
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 2.2e-84 317.0 367 49.0
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 2.2e-84 317.0 411 46.0
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 1.8e-83 313.9 377 50.9
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.8e-83 313.9 376 50.0
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 9.1e-83 311.6 415 46.7
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.0e-82 310.5 398 46.5
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 2.6e-82 310.1 416 44.7
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 1.3e-81 307.8 375 49.6
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 1.3e-81 307.8 375 49.6
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 6.5e-81 305.4 383 49.3
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 2.5e-80 303.5 378 47.6
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 3.2e-80 303.1 368 48.9
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 2.1e-79 300.4 384 46.6
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 2.1e-79 300.4 368 48.6
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 3.0e-78 296.6 394 45.4
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 1.1e-77 294.7 366 46.7
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 2.0e-77 293.9 360 46.1
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 6.9e-75 285.4 390 46.2
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 4.5e-74 282.7 370 45.4
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.3e-73 281.2 407 43.5
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.7e-73 280.8 351 47.0
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 2.5e-72 276.9 411 43.8
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 4.8e-68 262.7 299 50.8
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 1.6e-66 257.7 303 48.8
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 9.4e-64 248.4 313 49.8
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 3.6e-63 246.5 282 47.9
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 8.2e-60 235.3 352 42.3
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.0e-57 228.4 386 38.6
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 5.0e-57 226.1 365 38.6
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 1.5e-56 224.6 387 38.5
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.2e-54 216.1 237 51.5
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.2e-54 216.1 237 51.5
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 3.4e-53 213.4 239 52.7
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 9.1e-51 205.3 369 38.2
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 4.3e-40 169.9 238 42.4
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 9.5e-40 168.7 241 43.2
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 8.0e-39 165.6 320 34.7
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 7.3e-32 142.5 125 58.4
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 7.3e-32 142.5 125 58.4
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 2.8e-31 140.6 395 30.1
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.4e-30 138.3 143 53.1
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.2e-29 135.2 238 39.1
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 1.9e-27 127.9 187 47.1
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.0e-26 122.9 116 55.2
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 1.7e-25 121.3 159 50.3
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 3.3e-24 117.1 209 39.7
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 2.1e-23 114.4 174 37.9
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 2.3e-22 110.9 351 30.2
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 3.2e-19 100.5 128 43.8
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 9.2e-19 99.0 330 29.7
Lalb_Chr13g0294981 Lupinus albus HOM05D006726 ORTHO05D008328 7.1e-11 72.8 63 63.5
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 9.0e-06 55.8 130 33.8


User provided reference genes

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