Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 4.9e-55 217.6 116 100.0
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 5.0e-47 191.0 112 90.2
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 6.5e-47 190.7 116 88.8
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 7.2e-46 187.2 117 84.6
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 2.1e-45 185.7 121 83.5
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 1.1e-43 179.9 112 84.8
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.5e-43 179.5 112 83.9
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 3.3e-43 178.3 111 82.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 4.8e-42 174.5 112 82.1
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 9.1e-41 170.2 116 75.9
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 2.6e-40 168.7 111 80.2
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 1.7e-39 166.0 115 77.4
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 7.2e-38 160.6 109 75.2
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.6e-37 159.5 117 72.6
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 2.1e-37 159.1 117 73.5
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 2.1e-37 159.1 117 74.4
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 2.7e-37 158.7 116 72.4
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 7.9e-37 157.1 110 71.8
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.0e-36 156.8 111 74.8
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.4e-36 156.4 111 72.1
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 1.4e-36 156.4 116 69.0
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 1.8e-36 156.0 138 65.2
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.8e-36 156.0 119 71.4
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 2.3e-36 155.6 111 71.2
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 2.3e-36 155.6 111 71.2
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 2.3e-36 155.6 111 71.2
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 2.3e-36 155.6 111 71.2
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 2.3e-36 155.6 111 71.2
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 2.3e-36 155.6 117 69.2
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.3e-36 155.6 116 69.0
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 3.0e-36 155.2 116 71.6
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 3.9e-36 154.8 110 75.5
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 5.1e-36 154.5 118 69.5
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 6.7e-36 154.1 110 72.7
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 8.8e-36 153.7 116 70.7
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 8.8e-36 153.7 109 74.3
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.0e-35 152.5 116 69.8
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 2.6e-35 152.1 104 74.0
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 2.6e-35 152.1 111 68.5
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.6e-35 152.1 112 71.4
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.3e-35 151.8 112 70.5
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 4.4e-35 151.4 111 71.2
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 5.7e-35 151.0 109 70.6
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 7.4e-35 150.6 113 68.1
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.7e-34 149.4 115 68.7
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.7e-34 149.4 111 71.2
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.7e-34 149.4 111 69.4
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 3.7e-34 148.3 111 70.3
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 3.7e-34 148.3 111 70.3
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 3.7e-34 148.3 111 69.4
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 3.7e-34 148.3 111 69.4
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 4.8e-34 147.9 111 70.3
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 4.8e-34 147.9 111 69.4
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 6.3e-34 147.5 116 66.4
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 6.3e-34 147.5 112 69.6
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 8.2e-34 147.1 113 67.3
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 8.2e-34 147.1 112 71.4
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.8e-33 146.0 111 68.5
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.8e-33 146.0 113 67.3
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.8e-33 146.0 111 68.5
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 1.8e-33 146.0 111 68.5
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 3.1e-33 145.2 111 68.5
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 7.0e-33 144.1 110 70.0
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 7.0e-33 144.1 111 68.5
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 7.0e-33 144.1 103 72.8
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 7.0e-33 144.1 110 68.2
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 9.1e-33 143.7 111 69.4
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 9.1e-33 143.7 111 68.5
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.2e-32 143.3 112 65.2
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 1.5e-32 142.9 110 68.2
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 3.5e-32 141.7 116 63.8
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 4.5e-32 141.4 103 69.9
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 4.5e-32 141.4 111 67.6
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 5.9e-32 141.0 115 64.3
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.7e-31 139.4 111 66.7
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 2.2e-31 139.0 116 62.9
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.9e-31 138.7 106 68.9
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 3.8e-31 138.3 104 69.2
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 8.5e-31 137.1 109 67.0
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 1.5e-30 136.3 111 64.0
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 2.5e-30 135.6 106 67.9
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 4.2e-30 134.8 95 71.6
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 4.2e-30 134.8 111 64.0
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 5.5e-30 134.4 106 67.9
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 1.8e-28 129.4 109 63.3
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.8e-28 129.4 89 75.3
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 1.1e-27 126.7 86 75.6
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.0e-27 125.9 89 74.2
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 2.0e-27 125.9 114 59.6
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 5.7e-27 124.4 92 70.7
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.8e-26 122.1 88 71.6
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 3.7e-26 121.7 90 70.0
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 6.3e-26 120.9 87 73.6
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 6.3e-26 120.9 83 73.5
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.4e-25 119.0 96 68.8
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 7.0e-25 117.5 86 68.6
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 7.0e-25 117.5 83 71.1
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 9.1e-25 117.1 85 72.9
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.2e-24 116.7 80 73.8
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.2e-24 116.7 171 45.0
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 2.0e-24 115.9 83 73.5
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 2.6e-24 115.5 88 71.6
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 3.5e-24 115.2 105 60.0
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 1.5e-22 109.8 81 70.4
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.9e-22 109.4 119 55.5
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.5e-22 107.8 73 74.0
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.2e-21 106.7 84 64.3
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 3.7e-18 95.1 70 67.1
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 1.6e-16 89.7 79 59.5
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 3.5e-16 88.6 64 70.3
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 5.9e-16 87.8 58 79.3
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 5.9e-16 87.8 111 47.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.5e-14 83.2 49 81.6
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.1e-13 79.3 52 75.0
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 8.0e-13 77.4 116 47.4
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.4e-11 72.0 56 69.6
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.7e-07 59.7 110 35.5
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.2e-06 55.1 106 35.8


User provided reference genes

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