Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 4.6e-191 671.0 327 100.0
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.7e-145 519.6 326 79.8
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 4.4e-141 505.0 330 76.4
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 5.0e-129 464.9 324 73.8
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 1.6e-122 443.4 324 71.3
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.5e-120 436.8 323 68.1
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 7.3e-120 434.5 325 69.5
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 7.5e-117 424.5 327 67.3
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 2.9e-116 422.5 327 67.6
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 2.4e-115 419.5 329 66.9
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 3.9e-113 412.1 331 65.6
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 4.9e-108 395.2 320 66.6
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 2.1e-106 389.8 330 61.5
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 1.9e-104 383.3 286 71.0
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 6.0e-98 361.7 286 66.1
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 6.8e-94 348.2 272 64.7
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 9.9e-93 344.4 326 56.7
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 2.9e-92 342.8 252 66.3
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 3.8e-92 342.4 243 65.4
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.4e-91 340.5 243 65.4
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 1.9e-91 340.1 325 55.1
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 2.4e-91 339.7 314 56.4
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.4e-91 339.7 314 56.4
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 2.4e-91 339.7 328 58.2
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 4.2e-91 339.0 330 55.8
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 2.7e-90 336.3 327 54.1
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 4.6e-90 335.5 241 68.0
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.6e-90 335.5 294 58.5
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 7.8e-90 334.7 241 67.6
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 7.8e-90 334.7 294 58.2
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 1.9e-88 330.1 228 68.9
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 2.5e-88 329.7 329 55.0
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 3.3e-88 329.3 256 63.7
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 4.3e-88 328.9 243 63.0
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 7.3e-88 328.2 276 62.3
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 7.3e-88 328.2 276 62.0
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 2.1e-87 326.6 288 58.7
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 2.8e-87 326.2 334 53.9
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.6e-87 325.9 245 67.3
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 3.6e-87 325.9 280 59.6
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.1e-86 324.3 325 54.5
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.8e-86 323.6 255 63.1
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 1.8e-86 323.6 327 55.0
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.4e-86 323.2 247 63.2
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 6.9e-86 321.6 329 52.9
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 9.0e-86 321.2 329 54.1
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 1.2e-85 320.9 302 55.0
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 1.2e-85 320.9 301 55.1
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 1.2e-85 320.9 301 55.1
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.5e-85 320.5 252 61.9
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 1.5e-85 320.5 257 61.9
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.6e-85 319.7 291 57.7
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 5.8e-85 318.5 249 63.9
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 5.8e-85 318.5 252 61.9
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 5.8e-85 318.5 335 53.4
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 7.6e-85 318.2 247 62.8
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 9.9e-85 317.8 247 62.3
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 1.3e-84 317.4 325 53.5
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 1.3e-84 317.4 246 63.4
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 2.9e-84 316.2 237 64.1
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 3.8e-84 315.8 254 59.1
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 3.8e-84 315.8 335 52.5
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 3.8e-84 315.8 262 60.3
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 4.9e-84 315.5 244 60.7
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.9e-83 313.5 276 58.3
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.9e-83 313.5 272 59.2
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.4e-83 313.2 230 68.3
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 3.2e-83 312.8 308 54.5
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 4.2e-83 312.4 304 53.3
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 5.4e-83 312.0 303 54.5
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 7.1e-83 311.6 332 53.0
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 1.2e-82 310.8 282 56.0
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.7e-82 309.7 252 60.7
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 6.0e-82 308.5 327 51.1
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 6.6e-81 305.1 252 59.9
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 8.7e-81 304.7 248 60.5
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 3.3e-80 302.8 277 57.4
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 9.6e-80 301.2 236 61.9
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 3.6e-79 299.3 245 60.4
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 4.8e-79 298.9 264 56.4
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 1.8e-78 297.0 326 50.3
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 3.1e-78 296.2 271 55.4
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 3.1e-78 296.2 271 55.4
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 6.9e-78 295.0 243 59.7
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 4.5e-77 292.4 261 57.5
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 7.6e-77 291.6 240 59.2
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 2.9e-76 289.7 237 60.3
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 4.9e-76 288.9 216 63.0
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.4e-75 287.3 239 59.0
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.9e-75 287.0 270 55.2
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 2.4e-75 286.6 253 55.7
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 3.2e-75 286.2 239 59.0
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 4.2e-75 285.8 237 56.5
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 2.1e-74 283.5 221 62.4
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.8e-70 270.4 328 47.9
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 2.4e-70 270.0 226 59.7
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 6.9e-70 268.5 255 53.7
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.0e-68 264.6 241 55.6
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 2.2e-68 263.5 392 42.6
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 3.9e-57 226.1 232 50.0
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.8e-55 219.9 164 64.6
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.4e-51 207.6 150 70.0
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 3.6e-50 203.0 223 49.8
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 6.3e-47 192.2 246 43.1
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.8e-46 190.7 159 57.9
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 1.5e-45 187.6 256 41.8
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.3e-44 184.5 239 44.4
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 1.7e-44 184.1 142 68.3
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 3.8e-44 183.0 235 45.1
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.2e-43 179.5 190 53.7
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 5.5e-43 179.1 138 63.8
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 6.1e-42 175.6 297 36.0
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.1e-40 171.4 154 55.2
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 6.3e-39 165.6 108 75.9
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 8.2e-39 165.2 136 59.6
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 2.6e-37 160.2 134 56.0
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 8.5e-36 155.2 103 68.9
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 9.7e-32 141.7 121 57.0
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 1.8e-30 137.5 73 91.8
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 1.3e-28 131.3 135 53.3
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 3.8e-28 129.8 107 60.7
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 4.7e-26 122.9 139 43.9
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 1.3e-23 114.8 178 41.0
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.2e-17 92.8 64 75.0
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 8.6e-12 75.5 74 54.1


User provided reference genes

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